Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC96Q2M329 MIR8062-201ENST00000621515 85 ntBASIC1.92□□□□□ -2.1
CCDC96Q2M329 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CCDC96Q2M329 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC96Q2M329 SNORD113-8-201ENST00000363497 74 ntBASIC1.91□□□□□ -2.1
CCDC96Q2M329 Y_RNA.176-201ENST00000363815 109 ntBASIC1.91□□□□□ -2.1
CCDC96Q2M329 RNU6-338P-201ENST00000383888 105 ntBASIC1.91□□□□□ -2.1
CCDC96Q2M329 RNU6-102P-201ENST00000384485 104 ntBASIC1.91□□□□□ -2.1
CCDC96Q2M329 AL355796.1-201ENST00000406706 323 ntBASIC1.91□□□□□ -2.1
CCDC96Q2M329 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.91□□□□□ -2.1
CCDC96Q2M329 MIR1267-201ENST00000408723 78 ntBASIC1.91□□□□□ -2.1
CCDC96Q2M329 AC008134.1-201ENST00000420943 193 ntBASIC1.91□□□□□ -2.1
CCDC96Q2M329 SNORD65B-201ENST00000459126 73 ntBASIC1.91□□□□□ -2.1
CCDC96Q2M329 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC96Q2M329 RNY3P15-201ENST00000516297 97 ntBASIC1.91□□□□□ -2.1
CCDC96Q2M329 SNORD113-5-201ENST00000607261 78 ntBASIC1.91□□□□□ -2.1
CCDC96Q2M329 AC011373.1-201ENST00000607270 237 ntBASIC1.91□□□□□ -2.1
CCDC96Q2M329 AC006435.5-201ENST00000624486 112 ntBASIC1.91□□□□□ -2.1
CCDC96Q2M329 Y_RNA.149-201ENST00000363558 117 ntBASIC1.9□□□□□ -2.11
CCDC96Q2M329 Y_RNA.286-201ENST00000364813 102 ntBASIC1.9□□□□□ -2.11
CCDC96Q2M329 SNORD48-201ENST00000364953 64 ntBASIC1.9□□□□□ -2.11
CCDC96Q2M329 Y_RNA.512-201ENST00000384518 102 ntBASIC1.9□□□□□ -2.11
CCDC96Q2M329 MIR215-201ENST00000384858 110 ntBASIC1.9□□□□□ -2.11
CCDC96Q2M329 RNU6-360P-201ENST00000390944 104 ntBASIC1.9□□□□□ -2.11
CCDC96Q2M329 SUMO1P2-201ENST00000452524 304 ntBASIC1.9□□□□□ -2.11
CCDC96Q2M329 AC005042.3-201ENST00000453230 174 ntBASIC1.9□□□□□ -2.11
CCDC96Q2M329 SEPT14P8-201ENST00000508026 178 ntBASIC1.9□□□□□ -2.11
CCDC96Q2M329 AC010598.1-201ENST00000510378 103 ntBASIC1.9□□□□□ -2.11
CCDC96Q2M329 AC011406.1-201ENST00000512440 370 ntBASIC1.9□□□□□ -2.11
CCDC96Q2M329 RNU6-436P-201ENST00000516171 114 ntBASIC1.9□□□□□ -2.11
CCDC96Q2M329 RNA5SP481-201ENST00000516814 122 ntBASIC1.9□□□□□ -2.11
CCDC96Q2M329 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC96Q2M329 AL161722.3-201ENST00000605789 2983 ntBASIC1.89□□□□□ -2.11
CCDC96Q2M329 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC96Q2M329 Y_RNA.84-201ENST00000363011 104 ntBASIC1.89□□□□□ -2.11
CCDC96Q2M329 RNU6-1019P-201ENST00000364424 107 ntBASIC1.89□□□□□ -2.11
CCDC96Q2M329 RNU6-1240P-201ENST00000365155 104 ntBASIC1.89□□□□□ -2.11
CCDC96Q2M329 RNU6-439P-201ENST00000384188 106 ntBASIC1.89□□□□□ -2.11
CCDC96Q2M329 RNU4-30P-201ENST00000410245 143 ntBASIC1.89□□□□□ -2.11
CCDC96Q2M329 RNU6-1203P-201ENST00000410703 110 ntBASIC1.89□□□□□ -2.11
CCDC96Q2M329 RN7SKP51-201ENST00000410781 304 ntBASIC1.89□□□□□ -2.11
CCDC96Q2M329 RN7SKP101-201ENST00000411376 320 ntBASIC1.89□□□□□ -2.11
CCDC96Q2M329 RPL23AP36-201ENST00000413895 458 ntBASIC1.89□□□□□ -2.11
CCDC96Q2M329 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
CCDC96Q2M329 AC069257.2-201ENST00000441819 155 ntBASIC1.89□□□□□ -2.11
CCDC96Q2M329 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC96Q2M329 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC96Q2M329 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.89□□□□□ -2.11
CCDC96Q2M329 MIR4303-201ENST00000581299 66 ntBASIC1.89□□□□□ -2.11
CCDC96Q2M329 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC96Q2M329 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC96Q2M329 MIR338-201ENST00000636369 67 ntBASIC1.89□□□□□ -2.11
CCDC96Q2M329 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC96Q2M329 AC010615.1-201ENST00000594254 1764 ntBASIC1.89□□□□□ -2.11
CCDC96Q2M329 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC96Q2M329 Y_RNA.136-201ENST00000363444 102 ntBASIC1.88□□□□□ -2.11
CCDC96Q2M329 Y_RNA.287-201ENST00000364853 94 ntBASIC1.88□□□□□ -2.11
CCDC96Q2M329 SNORA72.2-201ENST00000365028 127 ntBASIC1.88□□□□□ -2.11
CCDC96Q2M329 Y_RNA.331-201ENST00000365267 102 ntBASIC1.88□□□□□ -2.11
CCDC96Q2M329 Y_RNA.376-201ENST00000365638 108 ntBASIC1.88□□□□□ -2.11
CCDC96Q2M329 SNORA20B-201ENST00000384220 132 ntBASIC1.88□□□□□ -2.11
CCDC96Q2M329 RNU6-296P-201ENST00000384608 107 ntBASIC1.88□□□□□ -2.11
CCDC96Q2M329 Y_RNA.541-201ENST00000384640 113 ntBASIC1.88□□□□□ -2.11
CCDC96Q2M329 MT-TW-201ENST00000387382 68 ntBASIC1.88□□□□□ -2.11
CCDC96Q2M329 RNU2-61P-201ENST00000411069 191 ntBASIC1.88□□□□□ -2.11
CCDC96Q2M329 HMGN2P34-201ENST00000437647 269 ntBASIC1.88□□□□□ -2.11
CCDC96Q2M329 RNU1-98P-201ENST00000458992 160 ntBASIC1.88□□□□□ -2.11
CCDC96Q2M329 RNU7-110P-201ENST00000516891 62 ntBASIC1.88□□□□□ -2.11
CCDC96Q2M329 AP001282.2-201ENST00000616149 309 ntBASIC1.88□□□□□ -2.11
CCDC96Q2M329 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC96Q2M329 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC96Q2M329 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC96Q2M329 SNORA27.1-201ENST00000362604 124 ntBASIC1.87□□□□□ -2.11
CCDC96Q2M329 RNU4-90P-201ENST00000362773 141 ntBASIC1.87□□□□□ -2.11
CCDC96Q2M329 snoU2-30.2-201ENST00000362805 70 ntBASIC1.87□□□□□ -2.11
CCDC96Q2M329 RNU1-96P-201ENST00000364163 162 ntBASIC1.87□□□□□ -2.11
CCDC96Q2M329 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.87□□□□□ -2.11
CCDC96Q2M329 RNU1-78P-201ENST00000391248 165 ntBASIC1.87□□□□□ -2.11
CCDC96Q2M329 AL031003.1-201ENST00000404229 172 ntBASIC1.87□□□□□ -2.11
CCDC96Q2M329 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC96Q2M329 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC96Q2M329 Y_RNA.668-201ENST00000516233 93 ntBASIC1.87□□□□□ -2.11
CCDC96Q2M329 RNU6-155P-201ENST00000516347 100 ntBASIC1.87□□□□□ -2.11
CCDC96Q2M329 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.87□□□□□ -2.11
CCDC96Q2M329 SNORD53B-201ENST00000577887 78 ntBASIC1.87□□□□□ -2.11
CCDC96Q2M329 AC006001.4-201ENST00000622243 395 ntBASIC1.87□□□□□ -2.11
CCDC96Q2M329 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CCDC96Q2M329 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
CCDC96Q2M329 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CCDC96Q2M329 RNU6-862P-201ENST00000362804 105 ntBASIC1.86□□□□□ -2.11
CCDC96Q2M329 RNU6-238P-201ENST00000363313 106 ntBASIC1.86□□□□□ -2.11
CCDC96Q2M329 Y_RNA.144-201ENST00000363521 113 ntBASIC1.86□□□□□ -2.11
CCDC96Q2M329 RNU6-290P-201ENST00000365212 101 ntBASIC1.86□□□□□ -2.11
CCDC96Q2M329 Y_RNA.418-201ENST00000384029 102 ntBASIC1.86□□□□□ -2.11
CCDC96Q2M329 RNU6-463P-201ENST00000384340 107 ntBASIC1.86□□□□□ -2.11
CCDC96Q2M329 MIR873-201ENST00000401120 77 ntBASIC1.86□□□□□ -2.11
CCDC96Q2M329 AC099677.2-201ENST00000436385 175 ntBASIC1.86□□□□□ -2.11
CCDC96Q2M329 RNU7-128P-201ENST00000517247 62 ntBASIC1.86□□□□□ -2.11
CCDC96Q2M329 MIR4503-201ENST00000582187 83 ntBASIC1.86□□□□□ -2.11
CCDC96Q2M329 AC006380.1-201ENST00000603598 186 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 268.3 ms