Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RSPO4Q2I0M5 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.26□□□□□ -1.89
RSPO4Q2I0M5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RSPO4Q2I0M5 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RSPO4Q2I0M5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 SNORD116-10-201ENST00000363791 102 ntBASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 RNU1-89P-201ENST00000384592 164 ntBASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 MIR504-201ENST00000385065 83 ntBASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 MIR887-201ENST00000401258 79 ntBASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 AC023141.4-201ENST00000412031 328 ntBASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 AC003685.2-201ENST00000422795 395 ntBASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 AP002884.2-201ENST00000471647 395 ntBASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 AC084357.1-201ENST00000473404 255 ntBASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 AC008885.1-201ENST00000514930 301 ntBASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 RNU6-948P-201ENST00000516374 107 ntBASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 MIR4425-201ENST00000580572 84 ntBASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 AC008739.2-201ENST00000597006 317 ntBASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 AC145423.2-201ENST00000610631 239 ntBASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 MIR486-1-201ENST00000612171 68 ntBASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 AC073308.1-201ENST00000623696 305 ntBASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 AC009487.4-201ENST00000624969 3585 ntBASIC3.25□□□□□ -1.89
RSPO4Q2I0M5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 Y_RNA.253-201ENST00000364562 112 ntBASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 RNU6-1235P-201ENST00000384559 107 ntBASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 HMGN2P8-201ENST00000391458 268 ntBASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 RNU2-37P-201ENST00000410695 177 ntBASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 RNU2-40P-201ENST00000410833 196 ntBASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 AL353813.1-201ENST00000440700 253 ntBASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 RNU6-498P-201ENST00000459468 107 ntBASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 AC010401.1-201ENST00000463867 348 ntBASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 AC114801.3-201ENST00000510231 177 ntBASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 MIR449C-201ENST00000516047 92 ntBASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 Y_RNA.676-201ENST00000516393 96 ntBASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 HIGD1AP1-201ENST00000550979 275 ntBASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 MIR4712-201ENST00000583750 82 ntBASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 ELOCP29-201ENST00000588193 334 ntBASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 RNVU1-4-201ENST00000612985 164 ntBASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 AC064859.1-201ENST00000624741 174 ntBASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
RSPO4Q2I0M5 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 Y_RNA.377-201ENST00000365644 108 ntBASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 MIR520G-201ENST00000385064 90 ntBASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 MIR147B-201ENST00000390185 80 ntBASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 RPS29P31-201ENST00000446147 164 ntBASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 SCGB1D5P-201ENST00000515134 247 ntBASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 RNA5SP309-201ENST00000516670 106 ntBASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 MIR4319-201ENST00000577285 85 ntBASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 MIR3690-201ENST00000580266 75 ntBASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 AC022217.4-201ENST00000604389 163 ntBASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 AL359075.3-201ENST00000613288 217 ntBASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 MIR4727-201ENST00000622232 55 ntBASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RSPO4Q2I0M5 FAM35DP-201ENST00000323387 2712 ntBASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 RNU6-50P-201ENST00000362356 103 ntBASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 RNU6-633P-201ENST00000362612 103 ntBASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 RNA5SP322-201ENST00000363617 119 ntBASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 SNORA14A-201ENST00000364773 135 ntBASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 HSPE1P26-201ENST00000405341 275 ntBASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 MIR548O-201ENST00000408583 114 ntBASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 RNA5SP184-201ENST00000411071 108 ntBASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 AC112771.1-201ENST00000463581 102 ntBASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 RNA5SP468-201ENST00000516782 93 ntBASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 AC087685.1-201ENST00000587507 141 ntBASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 AL513534.2-201ENST00000603836 250 ntBASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RSPO4Q2I0M5 AC010733.2-201ENST00000589496 5702 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms