Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ECM1Q16610 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
ECM1Q16610 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ECM1Q16610 U8.1-201ENST00000362843 134 ntBASIC3.38□□□□□ -1.87
ECM1Q16610 RNU1-96P-201ENST00000364163 162 ntBASIC3.38□□□□□ -1.87
ECM1Q16610 RNU6-1131P-201ENST00000364955 107 ntBASIC3.38□□□□□ -1.87
ECM1Q16610 RNU6-573P-201ENST00000383938 106 ntBASIC3.38□□□□□ -1.87
ECM1Q16610 MIR548A1-201ENST00000385041 97 ntBASIC3.38□□□□□ -1.87
ECM1Q16610 SNORA48.2-201ENST00000390926 124 ntBASIC3.38□□□□□ -1.87
ECM1Q16610 SNORD72-201ENST00000390994 80 ntBASIC3.38□□□□□ -1.87
ECM1Q16610 RNU6-1186P-201ENST00000410429 97 ntBASIC3.38□□□□□ -1.87
ECM1Q16610 RNU6-554P-201ENST00000410466 106 ntBASIC3.38□□□□□ -1.87
ECM1Q16610 Z92545.1-201ENST00000411782 234 ntBASIC3.38□□□□□ -1.87
ECM1Q16610 AC060773.1-201ENST00000421698 310 ntBASIC3.38□□□□□ -1.87
ECM1Q16610 AC244505.4-201ENST00000434905 287 ntBASIC3.38□□□□□ -1.87
ECM1Q16610 SSXP5-201ENST00000443473 287 ntBASIC3.38□□□□□ -1.87
ECM1Q16610 Z96811.1-201ENST00000445880 108 ntBASIC3.38□□□□□ -1.87
ECM1Q16610 RNU6-1299P-201ENST00000516316 100 ntBASIC3.38□□□□□ -1.87
ECM1Q16610 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.38□□□□□ -1.87
ECM1Q16610 AC120024.3-201ENST00000603167 156 ntBASIC3.38□□□□□ -1.87
ECM1Q16610 AL353149.1-201ENST00000610667 244 ntBASIC3.38□□□□□ -1.87
ECM1Q16610 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.38□□□□□ -1.87
ECM1Q16610 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
ECM1Q16610 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
ECM1Q16610 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
ECM1Q16610 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ECM1Q16610 MIR592-201ENST00000384959 97 ntBASIC3.37□□□□□ -1.87
ECM1Q16610 RNA5SP323-201ENST00000391094 133 ntBASIC3.37□□□□□ -1.87
ECM1Q16610 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.37□□□□□ -1.87
ECM1Q16610 RNU6-1061P-201ENST00000516530 99 ntBASIC3.37□□□□□ -1.87
ECM1Q16610 MIR4662B-201ENST00000579498 81 ntBASIC3.37□□□□□ -1.87
ECM1Q16610 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
ECM1Q16610 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ECM1Q16610 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
ECM1Q16610 AC093831.2-201ENST00000624393 3427 ntBASIC3.36□□□□□ -1.87
ECM1Q16610 Y_RNA.120-201ENST00000363304 110 ntBASIC3.36□□□□□ -1.87
ECM1Q16610 Y_RNA.621-201ENST00000411065 96 ntBASIC3.36□□□□□ -1.87
ECM1Q16610 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.36□□□□□ -1.87
ECM1Q16610 AC092427.1-202ENST00000430569 476 ntBASIC3.36□□□□□ -1.87
ECM1Q16610 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.36□□□□□ -1.87
ECM1Q16610 RN7SL75P-201ENST00000461926 281 ntBASIC3.36□□□□□ -1.87
ECM1Q16610 RPS26P45-201ENST00000471748 340 ntBASIC3.36□□□□□ -1.87
ECM1Q16610 RNA5SP341-201ENST00000516261 117 ntBASIC3.36□□□□□ -1.87
ECM1Q16610 AC024995.1-201ENST00000523014 93 ntBASIC3.36□□□□□ -1.87
ECM1Q16610 AC091178.2-201ENST00000584401 117 ntBASIC3.36□□□□□ -1.87
ECM1Q16610 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.36□□□□□ -1.87
ECM1Q16610 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.36□□□□□ -1.87
ECM1Q16610 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.36□□□□□ -1.87
ECM1Q16610 AC018630.2-201ENST00000534866 2403 ntBASIC3.35□□□□□ -1.87
ECM1Q16610 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
ECM1Q16610 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
ECM1Q16610 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.35□□□□□ -1.87
ECM1Q16610 MIR422A-201ENST00000362286 90 ntBASIC3.35□□□□□ -1.87
ECM1Q16610 Y_RNA.281-201ENST00000364774 94 ntBASIC3.35□□□□□ -1.87
ECM1Q16610 Y_RNA.432-201ENST00000384087 111 ntBASIC3.35□□□□□ -1.87
ECM1Q16610 RPL21P3-201ENST00000395517 478 ntBASIC3.35□□□□□ -1.87
ECM1Q16610 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.35□□□□□ -1.87
ECM1Q16610 TRIAP1P1-201ENST00000427062 225 ntBASIC3.35□□□□□ -1.87
ECM1Q16610 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.35□□□□□ -1.87
ECM1Q16610 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.35□□□□□ -1.87
ECM1Q16610 RPS4XP11-201ENST00000446897 772 ntBASIC3.35□□□□□ -1.87
ECM1Q16610 ATP5J2P3-201ENST00000451550 258 ntBASIC3.35□□□□□ -1.87
ECM1Q16610 Y_RNA.649-201ENST00000459077 103 ntBASIC3.35□□□□□ -1.87
ECM1Q16610 AC018868.1-201ENST00000491307 315 ntBASIC3.35□□□□□ -1.87
ECM1Q16610 RNU6-781P-201ENST00000516377 101 ntBASIC3.35□□□□□ -1.87
ECM1Q16610 AL160236.1-201ENST00000556317 195 ntBASIC3.35□□□□□ -1.87
ECM1Q16610 AL121890.5-201ENST00000620848 304 ntBASIC3.35□□□□□ -1.87
ECM1Q16610 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ECM1Q16610 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
ECM1Q16610 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
ECM1Q16610 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.35□□□□□ -1.87
ECM1Q16610 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.34□□□□□ -1.87
ECM1Q16610 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ECM1Q16610 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ECM1Q16610 RNU6-766P-201ENST00000362478 107 ntBASIC3.34□□□□□ -1.87
ECM1Q16610 SNORA38-201ENST00000363946 132 ntBASIC3.34□□□□□ -1.87
ECM1Q16610 SNORA71.1-201ENST00000364523 117 ntBASIC3.34□□□□□ -1.87
ECM1Q16610 Y_RNA.328-201ENST00000365208 113 ntBASIC3.34□□□□□ -1.87
ECM1Q16610 MIR1278-201ENST00000408753 81 ntBASIC3.34□□□□□ -1.87
ECM1Q16610 RNU6-592P-201ENST00000411333 103 ntBASIC3.34□□□□□ -1.87
ECM1Q16610 MLLT10P1-201ENST00000418346 262 ntBASIC3.34□□□□□ -1.87
ECM1Q16610 S100A11P2-201ENST00000467589 312 ntBASIC3.34□□□□□ -1.87
ECM1Q16610 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.34□□□□□ -1.87
ECM1Q16610 RN7SKP19-201ENST00000516016 252 ntBASIC3.34□□□□□ -1.87
ECM1Q16610 RNU6-1096P-201ENST00000517089 102 ntBASIC3.34□□□□□ -1.87
ECM1Q16610 AC090142.3-201ENST00000519012 385 ntBASIC3.34□□□□□ -1.87
ECM1Q16610 AC245166.1-201ENST00000521012 253 ntBASIC3.34□□□□□ -1.87
ECM1Q16610 AL358944.1-201ENST00000528537 144 ntBASIC3.34□□□□□ -1.87
ECM1Q16610 MIR378D2-201ENST00000580636 98 ntBASIC3.34□□□□□ -1.87
ECM1Q16610 uc_338.4-201ENST00000616635 176 ntBASIC3.34□□□□□ -1.87
ECM1Q16610 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
ECM1Q16610 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
ECM1Q16610 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
ECM1Q16610 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ECM1Q16610 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
ECM1Q16610 RNU6-1336P-201ENST00000383886 109 ntBASIC3.33□□□□□ -1.88
ECM1Q16610 RNU6-1152P-201ENST00000384576 107 ntBASIC3.33□□□□□ -1.88
ECM1Q16610 MIR128-1-201ENST00000384921 82 ntBASIC3.33□□□□□ -1.88
ECM1Q16610 NDUFB4P4-201ENST00000404822 243 ntBASIC3.33□□□□□ -1.88
ECM1Q16610 SNORA11.4-201ENST00000408823 129 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms