Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 AC013791.1-201ENST00000616619 62 ntBASIC2.52□□□□□ -2.01
SF3B3Q15393 MIR5739-201ENST00000619803 80 ntBASIC2.52□□□□□ -2.01
SF3B3Q15393 MIR1248-201ENST00000629190 106 ntBASIC2.52□□□□□ -2.01
SF3B3Q15393 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.52□□□□□ -2.01
SF3B3Q15393 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SF3B3Q15393 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SF3B3Q15393 Y_RNA.287-201ENST00000364853 94 ntBASIC2.51□□□□□ -2.01
SF3B3Q15393 Y_RNA.341-201ENST00000365341 102 ntBASIC2.51□□□□□ -2.01
SF3B3Q15393 Y_RNA.456-201ENST00000384232 111 ntBASIC2.51□□□□□ -2.01
SF3B3Q15393 SNORA40.19-201ENST00000390846 128 ntBASIC2.51□□□□□ -2.01
SF3B3Q15393 AL355497.1-201ENST00000406262 551 ntBASIC2.51□□□□□ -2.01
SF3B3Q15393 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.51□□□□□ -2.01
SF3B3Q15393 AL392103.1-201ENST00000447000 198 ntBASIC2.51□□□□□ -2.01
SF3B3Q15393 AC074290.1-201ENST00000448883 135 ntBASIC2.51□□□□□ -2.01
SF3B3Q15393 SNORA70.12-201ENST00000516084 153 ntBASIC2.51□□□□□ -2.01
SF3B3Q15393 RNU6-965P-201ENST00000516721 96 ntBASIC2.51□□□□□ -2.01
SF3B3Q15393 AC022616.8-201ENST00000533569 253 ntBASIC2.51□□□□□ -2.01
SF3B3Q15393 AC121758.2-201ENST00000553271 193 ntBASIC2.51□□□□□ -2.01
SF3B3Q15393 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SF3B3Q15393 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.51□□□□□ -2.01
SF3B3Q15393 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SF3B3Q15393 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.51□□□□□ -2.01
SF3B3Q15393 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
SF3B3Q15393 RNU6-774P-201ENST00000363238 107 ntBASIC2.5□□□□□ -2.01
SF3B3Q15393 Y_RNA.124-201ENST00000363339 93 ntBASIC2.5□□□□□ -2.01
SF3B3Q15393 RNU6-1048P-201ENST00000364054 107 ntBASIC2.5□□□□□ -2.01
SF3B3Q15393 RNU6-546P-201ENST00000383991 107 ntBASIC2.5□□□□□ -2.01
SF3B3Q15393 SNORA20B-201ENST00000384220 132 ntBASIC2.5□□□□□ -2.01
SF3B3Q15393 Y_RNA.571-201ENST00000384753 98 ntBASIC2.5□□□□□ -2.01
SF3B3Q15393 MIR873-201ENST00000401120 77 ntBASIC2.5□□□□□ -2.01
SF3B3Q15393 RNU2-32P-201ENST00000411193 191 ntBASIC2.5□□□□□ -2.01
SF3B3Q15393 AL161788.1-201ENST00000441805 169 ntBASIC2.5□□□□□ -2.01
SF3B3Q15393 AC016717.1-201ENST00000448918 286 ntBASIC2.5□□□□□ -2.01
SF3B3Q15393 RPL23AP7-203ENST00000449021 469 ntBASIC2.5□□□□□ -2.01
SF3B3Q15393 AC104435.1-201ENST00000483483 166 ntBASIC2.5□□□□□ -2.01
SF3B3Q15393 RNU7-193P-201ENST00000516723 65 ntBASIC2.5□□□□□ -2.01
SF3B3Q15393 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.5□□□□□ -2.01
SF3B3Q15393 AC134026.1-201ENST00000623249 2239 ntBASIC2.5□□□□□ -2.01
SF3B3Q15393 RNU4-17P-201ENST00000365598 141 ntBASIC2.49□□□□□ -2.01
SF3B3Q15393 SNORD14D-201ENST00000384390 87 ntBASIC2.49□□□□□ -2.01
SF3B3Q15393 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SF3B3Q15393 AC019129.1-201ENST00000403786 261 ntBASIC2.49□□□□□ -2.01
SF3B3Q15393 RNU6-57P-201ENST00000411348 103 ntBASIC2.49□□□□□ -2.01
SF3B3Q15393 HMGN2P18-201ENST00000450680 270 ntBASIC2.49□□□□□ -2.01
SF3B3Q15393 CYP2C59P-201ENST00000457790 269 ntBASIC2.49□□□□□ -2.01
SF3B3Q15393 SNORD65B-201ENST00000459126 73 ntBASIC2.49□□□□□ -2.01
SF3B3Q15393 CKS1BP2-201ENST00000497342 240 ntBASIC2.49□□□□□ -2.01
SF3B3Q15393 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.49□□□□□ -2.01
SF3B3Q15393 RNU6-406P-201ENST00000516470 107 ntBASIC2.49□□□□□ -2.01
SF3B3Q15393 SNORA48.11-201ENST00000517015 89 ntBASIC2.49□□□□□ -2.01
SF3B3Q15393 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.49□□□□□ -2.01
SF3B3Q15393 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.49□□□□□ -2.01
SF3B3Q15393 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.49□□□□□ -2.01
SF3B3Q15393 MIR6840-201ENST00000611937 71 ntBASIC2.49□□□□□ -2.01
SF3B3Q15393 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SF3B3Q15393 AL159152.1-201ENST00000635019 2587 ntBASIC2.49□□□□□ -2.01
SF3B3Q15393 Y_RNA.7-201ENST00000362352 102 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 SNORA27.1-201ENST00000362604 124 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 RNU1-23P-201ENST00000363361 144 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 Y_RNA.172-201ENST00000363765 102 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 RNU6-899P-201ENST00000363947 107 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 RNU6-125P-201ENST00000384505 107 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 RNU6-1235P-201ENST00000384559 107 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 MTCO2P33-201ENST00000402100 465 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 RNU2-48P-201ENST00000410694 191 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 RNU6-394P-201ENST00000410735 107 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 HSPE1P13-201ENST00000451143 297 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 RNU6-498P-201ENST00000459468 107 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 AC010598.1-201ENST00000510378 103 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 RNU6-948P-201ENST00000516374 107 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 PRELID2P1-201ENST00000552837 301 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 MIR5089-201ENST00000580047 84 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 MIR3133-201ENST00000583157 78 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 AC021753.1-201ENST00000635724 168 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 AC009487.4-201ENST00000624969 3585 ntBASIC2.48□□□□□ -2.01
SF3B3Q15393 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.48□□□□□ -2.01
SF3B3Q15393 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SF3B3Q15393 Y_RNA.121-201ENST00000363309 113 ntBASIC2.47□□□□□ -2.01
SF3B3Q15393 Y_RNA.170-201ENST00000363746 110 ntBASIC2.47□□□□□ -2.01
SF3B3Q15393 Y_RNA.238-201ENST00000364441 102 ntBASIC2.47□□□□□ -2.01
SF3B3Q15393 RNU6-418P-201ENST00000384035 107 ntBASIC2.47□□□□□ -2.01
SF3B3Q15393 Y_RNA.441-201ENST00000384123 112 ntBASIC2.47□□□□□ -2.01
SF3B3Q15393 Y_RNA.506-201ENST00000384494 102 ntBASIC2.47□□□□□ -2.01
SF3B3Q15393 RNU6-381P-201ENST00000391259 108 ntBASIC2.47□□□□□ -2.01
SF3B3Q15393 RNU6-1135P-201ENST00000411083 103 ntBASIC2.47□□□□□ -2.01
SF3B3Q15393 RPS20P10-201ENST00000451209 253 ntBASIC2.47□□□□□ -2.01
SF3B3Q15393 RNU7-141P-201ENST00000459304 62 ntBASIC2.47□□□□□ -2.01
SF3B3Q15393 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.47□□□□□ -2.01
SF3B3Q15393 RNU6-1278P-201ENST00000516130 107 ntBASIC2.47□□□□□ -2.01
SF3B3Q15393 Y_RNA.703-201ENST00000516846 111 ntBASIC2.47□□□□□ -2.01
SF3B3Q15393 AC025647.1-201ENST00000517879 253 ntBASIC2.47□□□□□ -2.01
SF3B3Q15393 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.47□□□□□ -2.01
SF3B3Q15393 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
SF3B3Q15393 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
SF3B3Q15393 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SF3B3Q15393 RNA5SP240-201ENST00000365355 128 ntBASIC2.46□□□□□ -2.02
SF3B3Q15393 RNU6-438P-201ENST00000365561 103 ntBASIC2.46□□□□□ -2.02
SF3B3Q15393 RNU6-187P-201ENST00000384139 106 ntBASIC2.46□□□□□ -2.02
SF3B3Q15393 MIR583-201ENST00000384846 75 ntBASIC2.46□□□□□ -2.02
SF3B3Q15393 MIR626-201ENST00000385032 94 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms