Protein–RNA interactions for Protein: Q03395

ROM1, Rod outer segment membrane protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1Q03395 RNU6-131P-201ENST00000391144 107 ntBASIC2.43□□□□□ -2.02
ROM1Q03395 SNORA79-201ENST00000408376 140 ntBASIC2.43□□□□□ -2.02
ROM1Q03395 SNORA11.4-201ENST00000408823 129 ntBASIC2.43□□□□□ -2.02
ROM1Q03395 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.43□□□□□ -2.02
ROM1Q03395 HMGN1P7-201ENST00000491722 313 ntBASIC2.43□□□□□ -2.02
ROM1Q03395 SNORD77.4-201ENST00000516158 81 ntBASIC2.43□□□□□ -2.02
ROM1Q03395 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
ROM1Q03395 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
ROM1Q03395 Y_RNA.343-201ENST00000365354 112 ntBASIC2.42□□□□□ -2.02
ROM1Q03395 Y_RNA.521-201ENST00000384560 114 ntBASIC2.42□□□□□ -2.02
ROM1Q03395 RNU6-768P-201ENST00000384683 107 ntBASIC2.42□□□□□ -2.02
ROM1Q03395 SNORA12.1-201ENST00000390873 148 ntBASIC2.42□□□□□ -2.02
ROM1Q03395 MIR1283-2-201ENST00000408621 87 ntBASIC2.42□□□□□ -2.02
ROM1Q03395 SNRPGP10-201ENST00000432323 225 ntBASIC2.42□□□□□ -2.02
ROM1Q03395 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.42□□□□□ -2.02
ROM1Q03395 AL606517.2-201ENST00000442855 241 ntBASIC2.42□□□□□ -2.02
ROM1Q03395 RPL39P40-201ENST00000445481 146 ntBASIC2.42□□□□□ -2.02
ROM1Q03395 RNU7-94P-201ENST00000459576 63 ntBASIC2.42□□□□□ -2.02
ROM1Q03395 NDUFA4P2-201ENST00000489989 244 ntBASIC2.42□□□□□ -2.02
ROM1Q03395 RNA5SP272-201ENST00000516095 111 ntBASIC2.42□□□□□ -2.02
ROM1Q03395 RNU6-1299P-201ENST00000516316 100 ntBASIC2.42□□□□□ -2.02
ROM1Q03395 RNU6-426P-201ENST00000516464 97 ntBASIC2.42□□□□□ -2.02
ROM1Q03395 RN7SKP57-201ENST00000517248 293 ntBASIC2.42□□□□□ -2.02
ROM1Q03395 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.42□□□□□ -2.02
ROM1Q03395 AC022217.4-201ENST00000604389 163 ntBASIC2.42□□□□□ -2.02
ROM1Q03395 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.42□□□□□ -2.02
ROM1Q03395 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.42□□□□□ -2.02
ROM1Q03395 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
ROM1Q03395 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.42□□□□□ -2.02
ROM1Q03395 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ROM1Q03395 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.42□□□□□ -2.02
ROM1Q03395 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
ROM1Q03395 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ROM1Q03395 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
ROM1Q03395 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
ROM1Q03395 SNORD50.2-201ENST00000365465 70 ntBASIC2.41□□□□□ -2.02
ROM1Q03395 MIR518A2-201ENST00000384966 87 ntBASIC2.41□□□□□ -2.02
ROM1Q03395 MIR569-201ENST00000385228 96 ntBASIC2.41□□□□□ -2.02
ROM1Q03395 SNORD37.2-201ENST00000391075 66 ntBASIC2.41□□□□□ -2.02
ROM1Q03395 AC022018.1-201ENST00000430685 241 ntBASIC2.41□□□□□ -2.02
ROM1Q03395 RNU6-197P-201ENST00000516680 100 ntBASIC2.41□□□□□ -2.02
ROM1Q03395 RNU7-149P-201ENST00000516739 59 ntBASIC2.41□□□□□ -2.02
ROM1Q03395 AP002004.2-201ENST00000531656 154 ntBASIC2.41□□□□□ -2.02
ROM1Q03395 SNORD14A-201ENST00000606526 91 ntBASIC2.41□□□□□ -2.02
ROM1Q03395 AL591926.4-201ENST00000616895 298 ntBASIC2.41□□□□□ -2.02
ROM1Q03395 AC132825.6-201ENST00000638861 357 ntBASIC2.41□□□□□ -2.02
ROM1Q03395 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ROM1Q03395 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ROM1Q03395 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
ROM1Q03395 RNA5SP109-201ENST00000391010 116 ntBASIC2.4□□□□□ -2.03
ROM1Q03395 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.4□□□□□ -2.03
ROM1Q03395 RNU2-55P-201ENST00000411146 174 ntBASIC2.4□□□□□ -2.03
ROM1Q03395 HMGN2P3-201ENST00000433603 273 ntBASIC2.4□□□□□ -2.03
ROM1Q03395 HMGN2P5-201ENST00000436882 273 ntBASIC2.4□□□□□ -2.03
ROM1Q03395 RPS27P1-201ENST00000450552 247 ntBASIC2.4□□□□□ -2.03
ROM1Q03395 AL049830.1-201ENST00000468034 425 ntBASIC2.4□□□□□ -2.03
ROM1Q03395 SNORA25.12-201ENST00000516202 82 ntBASIC2.4□□□□□ -2.03
ROM1Q03395 RNU2-56P-201ENST00000516826 190 ntBASIC2.4□□□□□ -2.03
ROM1Q03395 AL358944.1-201ENST00000528537 144 ntBASIC2.4□□□□□ -2.03
ROM1Q03395 MIR5094-201ENST00000578766 85 ntBASIC2.4□□□□□ -2.03
ROM1Q03395 AP001485.1-201ENST00000604799 199 ntBASIC2.4□□□□□ -2.03
ROM1Q03395 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.4□□□□□ -2.03
ROM1Q03395 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.4□□□□□ -2.03
ROM1Q03395 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
ROM1Q03395 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
ROM1Q03395 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ROM1Q03395 MIR126-201ENST00000362291 85 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 RNU6-199P-201ENST00000362954 107 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 Y_RNA.91-201ENST00000363042 107 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 Y_RNA.393-201ENST00000383936 102 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 Y_RNA.497-201ENST00000384447 98 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 Y_RNA.568-201ENST00000384742 113 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 HMGN2P39-201ENST00000398005 273 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 RNU2-70P-201ENST00000410718 179 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 MLLT10P1-201ENST00000418346 262 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 CYCSP49-201ENST00000420810 319 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.39□□□□□ -2.03
ROM1Q03395 AC245047.3-201ENST00000429428 127 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 AL139132.1-201ENST00000431587 344 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.39□□□□□ -2.03
ROM1Q03395 OR9P1P-201ENST00000496431 281 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.39□□□□□ -2.03
ROM1Q03395 MIR548X2-201ENST00000579776 100 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 MIR4429-201ENST00000580105 73 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 MIR378D2-201ENST00000580636 98 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 AC069114.2-201ENST00000604699 304 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 Pinc.1-201ENST00000616452 154 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 AL161431.1-201ENST00000618966 4205 ntBASIC2.39□□□□□ -2.03
ROM1Q03395 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ROM1Q03395 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
ROM1Q03395 RNU1-109P-201ENST00000383960 147 ntBASIC2.38□□□□□ -2.03
ROM1Q03395 MIR670-201ENST00000390142 98 ntBASIC2.38□□□□□ -2.03
ROM1Q03395 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.38□□□□□ -2.03
ROM1Q03395 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.38□□□□□ -2.03
ROM1Q03395 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.38□□□□□ -2.03
ROM1Q03395 BX510359.1-201ENST00000456973 237 ntBASIC2.38□□□□□ -2.03
ROM1Q03395 SNORA74D-201ENST00000516404 141 ntBASIC2.38□□□□□ -2.03
ROM1Q03395 AC084364.2-201ENST00000546924 395 ntBASIC2.38□□□□□ -2.03
ROM1Q03395 AC120024.3-201ENST00000603167 156 ntBASIC2.38□□□□□ -2.03
ROM1Q03395 MIR8057-201ENST00000620957 69 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms