Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC107297.1-201ENST00000459991 176 ntBASIC3.78□□□□□ -1.8
USP46P62068 SNORD45.4-201ENST00000516629 73 ntBASIC3.78□□□□□ -1.8
USP46P62068 RNU7-6P-201ENST00000516845 62 ntBASIC3.78□□□□□ -1.8
USP46P62068 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.78□□□□□ -1.8
USP46P62068 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP46P62068 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.77□□□□□ -1.81
USP46P62068 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
USP46P62068 MIR494-201ENST00000349529 81 ntBASIC3.77□□□□□ -1.81
USP46P62068 SNORD46.1-201ENST00000364139 104 ntBASIC3.77□□□□□ -1.81
USP46P62068 SNORD114-6-201ENST00000364393 72 ntBASIC3.77□□□□□ -1.81
USP46P62068 SNORA68.1-201ENST00000364537 132 ntBASIC3.77□□□□□ -1.81
USP46P62068 RNU6-816P-201ENST00000390914 107 ntBASIC3.77□□□□□ -1.81
USP46P62068 RNU6-1268P-201ENST00000391214 107 ntBASIC3.77□□□□□ -1.81
USP46P62068 RNU6-1239P-201ENST00000391310 107 ntBASIC3.77□□□□□ -1.81
USP46P62068 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.77□□□□□ -1.81
USP46P62068 AC099677.2-201ENST00000436385 175 ntBASIC3.77□□□□□ -1.81
USP46P62068 RNU7-80P-201ENST00000459562 61 ntBASIC3.77□□□□□ -1.81
USP46P62068 DEFB131E-201ENST00000532329 154 ntBASIC3.77□□□□□ -1.81
USP46P62068 MIR4778-201ENST00000577635 80 ntBASIC3.77□□□□□ -1.81
USP46P62068 HSPE1P19-201ENST00000603327 295 ntBASIC3.77□□□□□ -1.81
USP46P62068 U4.6-201ENST00000621618 127 ntBASIC3.77□□□□□ -1.81
USP46P62068 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP46P62068 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP46P62068 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP46P62068 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP46P62068 Y_RNA.93-201ENST00000363066 109 ntBASIC3.76□□□□□ -1.81
USP46P62068 RNU4-36P-201ENST00000364294 144 ntBASIC3.76□□□□□ -1.81
USP46P62068 RNU6-820P-201ENST00000384273 107 ntBASIC3.76□□□□□ -1.81
USP46P62068 RNU6-938P-201ENST00000411285 103 ntBASIC3.76□□□□□ -1.81
USP46P62068 AC006539.3-201ENST00000454258 129 ntBASIC3.76□□□□□ -1.81
USP46P62068 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.76□□□□□ -1.81
USP46P62068 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.76□□□□□ -1.81
USP46P62068 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.76□□□□□ -1.81
USP46P62068 CTSLP2-204ENST00000629029 392 ntBASIC3.76□□□□□ -1.81
USP46P62068 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
USP46P62068 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP46P62068 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
USP46P62068 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
USP46P62068 Y_RNA.342-201ENST00000365352 113 ntBASIC3.75□□□□□ -1.81
USP46P62068 SNORA80E-201ENST00000384744 137 ntBASIC3.75□□□□□ -1.81
USP46P62068 MIR515-2-201ENST00000384883 83 ntBASIC3.75□□□□□ -1.81
USP46P62068 MIR515-1-201ENST00000384884 83 ntBASIC3.75□□□□□ -1.81
USP46P62068 RNU6-1275P-201ENST00000391087 107 ntBASIC3.75□□□□□ -1.81
USP46P62068 RPL21P3-201ENST00000395517 478 ntBASIC3.75□□□□□ -1.81
USP46P62068 RNU6-592P-201ENST00000411333 103 ntBASIC3.75□□□□□ -1.81
USP46P62068 SNRPGP14-201ENST00000435400 219 ntBASIC3.75□□□□□ -1.81
USP46P62068 RPS29P31-201ENST00000446147 164 ntBASIC3.75□□□□□ -1.81
USP46P62068 PRSS3P4-201ENST00000453323 162 ntBASIC3.75□□□□□ -1.81
USP46P62068 AC025518.1-201ENST00000479856 347 ntBASIC3.75□□□□□ -1.81
USP46P62068 RNU2-35P-201ENST00000516446 142 ntBASIC3.75□□□□□ -1.81
USP46P62068 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.75□□□□□ -1.81
USP46P62068 RNU6-638P-201ENST00000516582 104 ntBASIC3.75□□□□□ -1.81
USP46P62068 MIR3944-201ENST00000581277 108 ntBASIC3.75□□□□□ -1.81
USP46P62068 MIR4762-201ENST00000585261 75 ntBASIC3.75□□□□□ -1.81
USP46P62068 MIR7975-201ENST00000619350 68 ntBASIC3.75□□□□□ -1.81
USP46P62068 AC091932.4-201ENST00000623386 200 ntBASIC3.75□□□□□ -1.81
USP46P62068 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP46P62068 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.75□□□□□ -1.81
USP46P62068 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USP46P62068 MAPK10-322ENST00000641485 4530 ntBASIC3.74□□□□□ -1.81
USP46P62068 RNY3P2-201ENST00000362918 102 ntBASIC3.74□□□□□ -1.81
USP46P62068 U8.5-201ENST00000364528 136 ntBASIC3.74□□□□□ -1.81
USP46P62068 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.74□□□□□ -1.81
USP46P62068 Y_RNA.454-201ENST00000384224 113 ntBASIC3.74□□□□□ -1.81
USP46P62068 MIR1912-201ENST00000410389 80 ntBASIC3.74□□□□□ -1.81
USP46P62068 RN7SL636P-201ENST00000497504 294 ntBASIC3.74□□□□□ -1.81
USP46P62068 RN7SKP83-201ENST00000516512 178 ntBASIC3.74□□□□□ -1.81
USP46P62068 AC026421.1-201ENST00000519101 163 ntBASIC3.74□□□□□ -1.81
USP46P62068 AC002984.1-201ENST00000591692 448 ntBASIC3.74□□□□□ -1.81
USP46P62068 AL590808.1-201ENST00000618696 141 ntBASIC3.74□□□□□ -1.81
USP46P62068 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USP46P62068 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.74□□□□□ -1.81
USP46P62068 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USP46P62068 RNU6-862P-201ENST00000362804 105 ntBASIC3.73□□□□□ -1.81
USP46P62068 Y_RNA.336-201ENST00000365307 109 ntBASIC3.73□□□□□ -1.81
USP46P62068 SRIP3-201ENST00000413200 219 ntBASIC3.73□□□□□ -1.81
USP46P62068 AL109933.2-201ENST00000452651 260 ntBASIC3.73□□□□□ -1.81
USP46P62068 AC018868.1-201ENST00000491307 315 ntBASIC3.73□□□□□ -1.81
USP46P62068 AC024995.1-201ENST00000523014 93 ntBASIC3.73□□□□□ -1.81
USP46P62068 MIR3683-201ENST00000580847 82 ntBASIC3.73□□□□□ -1.81
USP46P62068 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.73□□□□□ -1.81
USP46P62068 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.73□□□□□ -1.81
USP46P62068 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USP46P62068 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
USP46P62068 MFSD8-233ENST00000641482 4860 ntBASIC3.72□□□□□ -1.81
USP46P62068 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
USP46P62068 RNU4-35P-201ENST00000362588 141 ntBASIC3.72□□□□□ -1.81
USP46P62068 RNVU1-14-201ENST00000384770 164 ntBASIC3.72□□□□□ -1.81
USP46P62068 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.72□□□□□ -1.81
USP46P62068 CST2P1-201ENST00000425770 87 ntBASIC3.72□□□□□ -1.81
USP46P62068 AC087499.4-201ENST00000448505 178 ntBASIC3.72□□□□□ -1.81
USP46P62068 RPS29P12-201ENST00000460178 152 ntBASIC3.72□□□□□ -1.81
USP46P62068 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.72□□□□□ -1.81
USP46P62068 SCARNA23-201ENST00000516060 130 ntBASIC3.72□□□□□ -1.81
USP46P62068 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.72□□□□□ -1.81
USP46P62068 FAM35CP-201ENST00000554755 2470 ntBASIC3.72□□□□□ -1.81
USP46P62068 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.72□□□□□ -1.81
USP46P62068 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
USP46P62068 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
USP46P62068 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms