Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 RNU6-781P-201ENST00000516377 101 ntBASIC2.79□□□□□ -1.96
ATXN1P54253 AC109810.1-201ENST00000534066 224 ntBASIC2.79□□□□□ -1.96
ATXN1P54253 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.79□□□□□ -1.96
ATXN1P54253 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.79□□□□□ -1.96
ATXN1P54253 MIR5739-201ENST00000619803 80 ntBASIC2.79□□□□□ -1.96
ATXN1P54253 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ATXN1P54253 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ATXN1P54253 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ATXN1P54253 RNU6-1125P-201ENST00000363601 107 ntBASIC2.78□□□□□ -1.96
ATXN1P54253 RNU5F-3P-201ENST00000363767 117 ntBASIC2.78□□□□□ -1.96
ATXN1P54253 RNA5SP125-201ENST00000364843 120 ntBASIC2.78□□□□□ -1.96
ATXN1P54253 Y_RNA.466-201ENST00000384294 113 ntBASIC2.78□□□□□ -1.96
ATXN1P54253 MT-TT-201ENST00000387460 66 ntBASIC2.78□□□□□ -1.96
ATXN1P54253 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
ATXN1P54253 RNU6-763P-201ENST00000390865 106 ntBASIC2.78□□□□□ -1.96
ATXN1P54253 SNORD72-201ENST00000390994 80 ntBASIC2.78□□□□□ -1.96
ATXN1P54253 MIR1255A-201ENST00000408338 113 ntBASIC2.78□□□□□ -1.96
ATXN1P54253 RNU2-63P-201ENST00000410792 194 ntBASIC2.78□□□□□ -1.96
ATXN1P54253 RNU2-32P-201ENST00000411193 191 ntBASIC2.78□□□□□ -1.96
ATXN1P54253 RNU6-1199P-201ENST00000411249 104 ntBASIC2.78□□□□□ -1.96
ATXN1P54253 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.78□□□□□ -1.96
ATXN1P54253 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.78□□□□□ -1.96
ATXN1P54253 RPS20P10-201ENST00000451209 253 ntBASIC2.78□□□□□ -1.96
ATXN1P54253 RN7SKP49-201ENST00000516675 260 ntBASIC2.78□□□□□ -1.96
ATXN1P54253 MIR4635-201ENST00000583759 79 ntBASIC2.78□□□□□ -1.96
ATXN1P54253 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ATXN1P54253 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.77□□□□□ -1.97
ATXN1P54253 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
ATXN1P54253 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ATXN1P54253 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ATXN1P54253 snoU2_19.1-201ENST00000362361 80 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 Y_RNA.337-201ENST00000365312 102 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 RNU6-1124P-201ENST00000384169 107 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 MIR549A-201ENST00000385268 96 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 MIR548A3-201ENST00000385297 97 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 MIR320B2-201ENST00000408479 138 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 RNA5SP201-201ENST00000410316 124 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 AC008134.1-201ENST00000420943 193 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.77□□□□□ -1.97
ATXN1P54253 EIF4EP4-201ENST00000424916 578 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.77□□□□□ -1.97
ATXN1P54253 AC007215.1-201ENST00000464893 276 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 AC139453.2-201ENST00000487255 133 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 AC145146.1-201ENST00000496370 254 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 RNU6-1061P-201ENST00000516530 99 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 AC015720.1-201ENST00000565251 277 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 AL356575.1-201ENST00000603008 283 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 PCGEM1.1-201ENST00000613431 131 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 AL353997.5-201ENST00000618886 171 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 AC012640.5-201ENST00000623897 319 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.77□□□□□ -1.97
ATXN1P54253 U6.95-201ENST00000636931 70 ntBASIC2.77□□□□□ -1.97
ATXN1P54253 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ATXN1P54253 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
ATXN1P54253 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.76□□□□□ -1.97
ATXN1P54253 RNU4-15P-201ENST00000362613 141 ntBASIC2.76□□□□□ -1.97
ATXN1P54253 RNU6-1048P-201ENST00000364054 107 ntBASIC2.76□□□□□ -1.97
ATXN1P54253 Y_RNA.244-201ENST00000364484 109 ntBASIC2.76□□□□□ -1.97
ATXN1P54253 MIR329-1-201ENST00000385028 80 ntBASIC2.76□□□□□ -1.97
ATXN1P54253 RNA5SP425-201ENST00000410336 112 ntBASIC2.76□□□□□ -1.97
ATXN1P54253 Y_RNA.595-201ENST00000410403 105 ntBASIC2.76□□□□□ -1.97
ATXN1P54253 AC009963.1-201ENST00000417265 157 ntBASIC2.76□□□□□ -1.97
ATXN1P54253 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.76□□□□□ -1.97
ATXN1P54253 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.76□□□□□ -1.97
ATXN1P54253 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.76□□□□□ -1.97
ATXN1P54253 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.76□□□□□ -1.97
ATXN1P54253 RN7SL297P-201ENST00000483161 293 ntBASIC2.76□□□□□ -1.97
ATXN1P54253 AC022441.3-201ENST00000605737 136 ntBASIC2.76□□□□□ -1.97
ATXN1P54253 AC010999.1-201ENST00000611856 324 ntBASIC2.76□□□□□ -1.97
ATXN1P54253 AL442128.1-201ENST00000615151 90 ntBASIC2.76□□□□□ -1.97
ATXN1P54253 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.76□□□□□ -1.97
ATXN1P54253 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ATXN1P54253 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.76□□□□□ -1.97
ATXN1P54253 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.75□□□□□ -1.97
ATXN1P54253 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.75□□□□□ -1.97
ATXN1P54253 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.75□□□□□ -1.97
ATXN1P54253 Y_RNA.219-201ENST00000364232 113 ntBASIC2.75□□□□□ -1.97
ATXN1P54253 Y_RNA.338-201ENST00000365320 114 ntBASIC2.75□□□□□ -1.97
ATXN1P54253 SNORD88.1-201ENST00000408684 91 ntBASIC2.75□□□□□ -1.97
ATXN1P54253 HMGN2P3-201ENST00000433603 273 ntBASIC2.75□□□□□ -1.97
ATXN1P54253 HMGN2P5-201ENST00000436882 273 ntBASIC2.75□□□□□ -1.97
ATXN1P54253 AL158147.1-201ENST00000443970 75 ntBASIC2.75□□□□□ -1.97
ATXN1P54253 RPL39P40-201ENST00000445481 146 ntBASIC2.75□□□□□ -1.97
ATXN1P54253 AC245047.8-201ENST00000456455 284 ntBASIC2.75□□□□□ -1.97
ATXN1P54253 CYP2C59P-201ENST00000457790 269 ntBASIC2.75□□□□□ -1.97
ATXN1P54253 AC090515.1-201ENST00000465295 476 ntBASIC2.75□□□□□ -1.97
ATXN1P54253 ATP5EP1-201ENST00000510257 156 ntBASIC2.75□□□□□ -1.97
ATXN1P54253 RNU6-1007P-201ENST00000516586 107 ntBASIC2.75□□□□□ -1.97
ATXN1P54253 EIF4A1P12-201ENST00000551910 141 ntBASIC2.75□□□□□ -1.97
ATXN1P54253 RPL30P11-203ENST00000598995 310 ntBASIC2.75□□□□□ -1.97
ATXN1P54253 SNRPGP20-201ENST00000604477 205 ntBASIC2.75□□□□□ -1.97
ATXN1P54253 AC134878.1-201ENST00000619901 243 ntBASIC2.75□□□□□ -1.97
ATXN1P54253 MIR6733-201ENST00000635723 61 ntBASIC2.75□□□□□ -1.97
ATXN1P54253 MIR6844-201ENST00000637122 62 ntBASIC2.75□□□□□ -1.97
ATXN1P54253 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.74□□□□□ -1.97
ATXN1P54253 Y_RNA.24-201ENST00000362508 103 ntBASIC2.74□□□□□ -1.97
ATXN1P54253 U8.1-201ENST00000362843 134 ntBASIC2.74□□□□□ -1.97
ATXN1P54253 Y_RNA.107-201ENST00000363190 121 ntBASIC2.74□□□□□ -1.97
ATXN1P54253 U3.9-201ENST00000363823 204 ntBASIC2.74□□□□□ -1.97
ATXN1P54253 RNU6-801P-201ENST00000364087 105 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms