Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MRPS35P2-201ENST00000508242 191 ntBASIC2.12□□□□□ -2.07
TM4SF4P48230 MIR4709-201ENST00000577272 72 ntBASIC2.12□□□□□ -2.07
TM4SF4P48230 MIR4300-201ENST00000581016 96 ntBASIC2.12□□□□□ -2.07
TM4SF4P48230 AC010900.2-201ENST00000604508 210 ntBASIC2.12□□□□□ -2.07
TM4SF4P48230 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TM4SF4P48230 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TM4SF4P48230 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.11□□□□□ -2.07
TM4SF4P48230 RNU4-90P-201ENST00000362773 141 ntBASIC2.11□□□□□ -2.07
TM4SF4P48230 RNU6-392P-201ENST00000364926 101 ntBASIC2.11□□□□□ -2.07
TM4SF4P48230 Y_RNA.329-201ENST00000365209 107 ntBASIC2.11□□□□□ -2.07
TM4SF4P48230 RNU6-1160P-201ENST00000384546 104 ntBASIC2.11□□□□□ -2.07
TM4SF4P48230 RNU6-296P-201ENST00000384608 107 ntBASIC2.11□□□□□ -2.07
TM4SF4P48230 RNU6-713P-201ENST00000384761 107 ntBASIC2.11□□□□□ -2.07
TM4SF4P48230 MIR520G-201ENST00000385064 90 ntBASIC2.11□□□□□ -2.07
TM4SF4P48230 RNU6-1248P-201ENST00000391096 64 ntBASIC2.11□□□□□ -2.07
TM4SF4P48230 Y_RNA.602-201ENST00000410535 92 ntBASIC2.11□□□□□ -2.07
TM4SF4P48230 snoU13.27-201ENST00000459278 104 ntBASIC2.11□□□□□ -2.07
TM4SF4P48230 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.11□□□□□ -2.07
TM4SF4P48230 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.11□□□□□ -2.07
TM4SF4P48230 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
TM4SF4P48230 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
TM4SF4P48230 Y_RNA.540-201ENST00000384638 111 ntBASIC2.1□□□□□ -2.07
TM4SF4P48230 MIR606-201ENST00000384851 96 ntBASIC2.1□□□□□ -2.07
TM4SF4P48230 MIR7-2-201ENST00000384970 110 ntBASIC2.1□□□□□ -2.07
TM4SF4P48230 AC025465.3-201ENST00000510570 311 ntBASIC2.1□□□□□ -2.07
TM4SF4P48230 RNU6-436P-201ENST00000516171 114 ntBASIC2.1□□□□□ -2.07
TM4SF4P48230 RNU2-56P-201ENST00000516826 190 ntBASIC2.1□□□□□ -2.07
TM4SF4P48230 RNA5SP437-201ENST00000517249 129 ntBASIC2.1□□□□□ -2.07
TM4SF4P48230 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.1□□□□□ -2.07
TM4SF4P48230 AC022254.1-201ENST00000567857 235 ntBASIC2.1□□□□□ -2.07
TM4SF4P48230 MIR502-201ENST00000606349 86 ntBASIC2.1□□□□□ -2.07
TM4SF4P48230 MIR6079-201ENST00000635807 62 ntBASIC2.1□□□□□ -2.07
TM4SF4P48230 Y_RNA.19-201ENST00000362462 99 ntBASIC2.09□□□□□ -2.07
TM4SF4P48230 RNU6-770P-201ENST00000363929 105 ntBASIC2.09□□□□□ -2.07
TM4SF4P48230 Y_RNA.327-201ENST00000365201 102 ntBASIC2.09□□□□□ -2.07
TM4SF4P48230 Y_RNA.361-201ENST00000365515 120 ntBASIC2.09□□□□□ -2.07
TM4SF4P48230 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
TM4SF4P48230 RNU6-360P-201ENST00000390944 104 ntBASIC2.09□□□□□ -2.07
TM4SF4P48230 RNA5SP109-201ENST00000391010 116 ntBASIC2.09□□□□□ -2.07
TM4SF4P48230 RNA5SP181-201ENST00000410246 98 ntBASIC2.09□□□□□ -2.07
TM4SF4P48230 RNU6-855P-201ENST00000410395 104 ntBASIC2.09□□□□□ -2.07
TM4SF4P48230 RN7SKP200-201ENST00000410564 320 ntBASIC2.09□□□□□ -2.07
TM4SF4P48230 RNU6-1199P-201ENST00000411249 104 ntBASIC2.09□□□□□ -2.07
TM4SF4P48230 MTND4LP30-201ENST00000454092 297 ntBASIC2.09□□□□□ -2.07
TM4SF4P48230 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.09□□□□□ -2.07
TM4SF4P48230 RNU6-1337P-201ENST00000516525 95 ntBASIC2.09□□□□□ -2.07
TM4SF4P48230 AC136932.1-201ENST00000574771 208 ntBASIC2.09□□□□□ -2.07
TM4SF4P48230 U6.108-201ENST00000637764 58 ntBASIC2.09□□□□□ -2.07
TM4SF4P48230 MIRLET7G-201ENST00000362280 84 ntBASIC2.08□□□□□ -2.08
TM4SF4P48230 Y_RNA.383-201ENST00000383855 97 ntBASIC2.08□□□□□ -2.08
TM4SF4P48230 MIR1267-201ENST00000408723 78 ntBASIC2.08□□□□□ -2.08
TM4SF4P48230 RNU2-61P-201ENST00000411069 191 ntBASIC2.08□□□□□ -2.08
TM4SF4P48230 Y_RNA.720-201ENST00000517166 92 ntBASIC2.08□□□□□ -2.08
TM4SF4P48230 RNU7-128P-201ENST00000517247 62 ntBASIC2.08□□□□□ -2.08
TM4SF4P48230 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.08□□□□□ -2.08
TM4SF4P48230 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.08□□□□□ -2.08
TM4SF4P48230 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TM4SF4P48230 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
TM4SF4P48230 Y_RNA.267-201ENST00000364679 109 ntBASIC2.07□□□□□ -2.08
TM4SF4P48230 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.07□□□□□ -2.08
TM4SF4P48230 RNU6-514P-201ENST00000384208 107 ntBASIC2.07□□□□□ -2.08
TM4SF4P48230 SNORD115-46-201ENST00000390982 71 ntBASIC2.07□□□□□ -2.08
TM4SF4P48230 SNORA53-201ENST00000391141 249 ntBASIC2.07□□□□□ -2.08
TM4SF4P48230 RPL21P1-201ENST00000399532 476 ntBASIC2.07□□□□□ -2.08
TM4SF4P48230 AC004965.1-201ENST00000413033 213 ntBASIC2.07□□□□□ -2.08
TM4SF4P48230 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.07□□□□□ -2.08
TM4SF4P48230 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.07□□□□□ -2.08
TM4SF4P48230 RNU6-1137P-201ENST00000517073 99 ntBASIC2.07□□□□□ -2.08
TM4SF4P48230 SNORA28-201ENST00000606769 126 ntBASIC2.07□□□□□ -2.08
TM4SF4P48230 AL391987.6-201ENST00000305671 199 ntBASIC2.06□□□□□ -2.08
TM4SF4P48230 Y_RNA.153-201ENST00000363615 91 ntBASIC2.06□□□□□ -2.08
TM4SF4P48230 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TM4SF4P48230 AL034345.1-201ENST00000407768 123 ntBASIC2.06□□□□□ -2.08
TM4SF4P48230 AC113618.1-201ENST00000416747 285 ntBASIC2.06□□□□□ -2.08
TM4SF4P48230 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.06□□□□□ -2.08
TM4SF4P48230 AL731563.1-201ENST00000442202 214 ntBASIC2.06□□□□□ -2.08
TM4SF4P48230 AC091021.1-201ENST00000468051 388 ntBASIC2.06□□□□□ -2.08
TM4SF4P48230 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.06□□□□□ -2.08
TM4SF4P48230 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.06□□□□□ -2.08
TM4SF4P48230 AC002984.1-201ENST00000591692 448 ntBASIC2.06□□□□□ -2.08
TM4SF4P48230 AL162424.1-201ENST00000602325 221 ntBASIC2.06□□□□□ -2.08
TM4SF4P48230 DEFB117-201ENST00000602356 141 ntBASIC2.06□□□□□ -2.08
TM4SF4P48230 MIR8074-201ENST00000615081 81 ntBASIC2.06□□□□□ -2.08
TM4SF4P48230 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.06□□□□□ -2.08
TM4SF4P48230 Y_RNA.145-201ENST00000363527 102 ntBASIC2.05□□□□□ -2.08
TM4SF4P48230 Y_RNA.265-201ENST00000364677 108 ntBASIC2.05□□□□□ -2.08
TM4SF4P48230 Y_RNA.341-201ENST00000365341 102 ntBASIC2.05□□□□□ -2.08
TM4SF4P48230 MIR30A-201ENST00000385092 71 ntBASIC2.05□□□□□ -2.08
TM4SF4P48230 RNU2-40P-201ENST00000410833 196 ntBASIC2.05□□□□□ -2.08
TM4SF4P48230 Y_RNA.621-201ENST00000411065 96 ntBASIC2.05□□□□□ -2.08
TM4SF4P48230 AC233266.1-201ENST00000454518 96 ntBASIC2.05□□□□□ -2.08
TM4SF4P48230 AC010655.3-201ENST00000478818 450 ntBASIC2.05□□□□□ -2.08
TM4SF4P48230 RNU6-63P-201ENST00000516690 95 ntBASIC2.05□□□□□ -2.08
TM4SF4P48230 RNU6-341P-201ENST00000516973 96 ntBASIC2.05□□□□□ -2.08
TM4SF4P48230 RNU6-1096P-201ENST00000517089 102 ntBASIC2.05□□□□□ -2.08
TM4SF4P48230 AP002004.2-201ENST00000531656 154 ntBASIC2.05□□□□□ -2.08
TM4SF4P48230 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.05□□□□□ -2.08
TM4SF4P48230 AC242852.1-201ENST00000612151 96 ntBASIC2.05□□□□□ -2.08
TM4SF4P48230 AC244015.1-201ENST00000622301 99 ntBASIC2.05□□□□□ -2.08
TM4SF4P48230 U6.104-201ENST00000637979 90 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms