Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 Y_RNA.542-201ENST00000384641 111 ntBASIC2.91□□□□□ -1.94
CCNFP41002 MIR1262-201ENST00000408276 93 ntBASIC2.91□□□□□ -1.94
CCNFP41002 RNA5SP492-201ENST00000411330 114 ntBASIC2.91□□□□□ -1.94
CCNFP41002 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.91□□□□□ -1.94
CCNFP41002 RN7SL297P-201ENST00000483161 293 ntBASIC2.91□□□□□ -1.94
CCNFP41002 RNU6-313P-201ENST00000516317 112 ntBASIC2.91□□□□□ -1.94
CCNFP41002 RNU1-142P-201ENST00000516682 145 ntBASIC2.91□□□□□ -1.94
CCNFP41002 CYCSP26-201ENST00000534107 320 ntBASIC2.91□□□□□ -1.94
CCNFP41002 AL021707.8-201ENST00000609428 183 ntBASIC2.91□□□□□ -1.94
CCNFP41002 AL365222.1-201ENST00000614661 98 ntBASIC2.91□□□□□ -1.94
CCNFP41002 MIR338-201ENST00000636369 67 ntBASIC2.91□□□□□ -1.94
CCNFP41002 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.91□□□□□ -1.94
CCNFP41002 RNU1-96P-201ENST00000364163 162 ntBASIC2.9□□□□□ -1.95
CCNFP41002 Y_RNA.796-201ENST00000364268 102 ntBASIC2.9□□□□□ -1.95
CCNFP41002 Y_RNA.799-201ENST00000364992 102 ntBASIC2.9□□□□□ -1.95
CCNFP41002 SNORA9.2-201ENST00000365361 133 ntBASIC2.9□□□□□ -1.95
CCNFP41002 RNU6-1336P-201ENST00000383886 109 ntBASIC2.9□□□□□ -1.95
CCNFP41002 MIR128-1-201ENST00000384921 82 ntBASIC2.9□□□□□ -1.95
CCNFP41002 ATP5J2P3-201ENST00000451550 258 ntBASIC2.9□□□□□ -1.95
CCNFP41002 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.9□□□□□ -1.95
CCNFP41002 AL049873.1-201ENST00000480540 376 ntBASIC2.9□□□□□ -1.95
CCNFP41002 RNU6-197P-201ENST00000516680 100 ntBASIC2.9□□□□□ -1.95
CCNFP41002 AC090142.3-201ENST00000519012 385 ntBASIC2.9□□□□□ -1.95
CCNFP41002 AC026271.5-201ENST00000577873 130 ntBASIC2.9□□□□□ -1.95
CCNFP41002 MIR3646-201ENST00000578301 84 ntBASIC2.9□□□□□ -1.95
CCNFP41002 AC120024.3-201ENST00000603167 156 ntBASIC2.9□□□□□ -1.95
CCNFP41002 AC011603.4-201ENST00000611325 277 ntBASIC2.9□□□□□ -1.95
CCNFP41002 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.9□□□□□ -1.95
CCNFP41002 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCNFP41002 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCNFP41002 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.89□□□□□ -1.95
CCNFP41002 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCNFP41002 SNORA33-201ENST00000363664 130 ntBASIC2.89□□□□□ -1.95
CCNFP41002 MIR512-1-201ENST00000384913 84 ntBASIC2.89□□□□□ -1.95
CCNFP41002 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.89□□□□□ -1.95
CCNFP41002 RN7SKP284-201ENST00000411002 343 ntBASIC2.89□□□□□ -1.95
CCNFP41002 AC022018.1-201ENST00000430685 241 ntBASIC2.89□□□□□ -1.95
CCNFP41002 RNA5SP341-201ENST00000516261 117 ntBASIC2.89□□□□□ -1.95
CCNFP41002 RNU2-56P-201ENST00000516826 190 ntBASIC2.89□□□□□ -1.95
CCNFP41002 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.89□□□□□ -1.95
CCNFP41002 AC096644.4-201ENST00000563417 2912 ntBASIC2.89□□□□□ -1.95
CCNFP41002 AL162274.2-201ENST00000614406 332 ntBASIC2.89□□□□□ -1.95
CCNFP41002 Pinc.1-201ENST00000616452 154 ntBASIC2.89□□□□□ -1.95
CCNFP41002 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.89□□□□□ -1.95
CCNFP41002 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCNFP41002 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCNFP41002 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.88□□□□□ -1.95
CCNFP41002 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCNFP41002 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CCNFP41002 RNU6-1082P-201ENST00000364574 107 ntBASIC2.88□□□□□ -1.95
CCNFP41002 RNU1-91P-201ENST00000364746 163 ntBASIC2.88□□□□□ -1.95
CCNFP41002 SNORA8-201ENST00000384574 139 ntBASIC2.88□□□□□ -1.95
CCNFP41002 RNU11-5P-201ENST00000391216 129 ntBASIC2.88□□□□□ -1.95
CCNFP41002 SNORA75.5-201ENST00000391291 81 ntBASIC2.88□□□□□ -1.95
CCNFP41002 MLLT10P1-201ENST00000418346 262 ntBASIC2.88□□□□□ -1.95
CCNFP41002 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.88□□□□□ -1.95
CCNFP41002 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.88□□□□□ -1.95
CCNFP41002 SNORD11-201ENST00000459124 84 ntBASIC2.88□□□□□ -1.95
CCNFP41002 AC092991.1-201ENST00000477176 376 ntBASIC2.88□□□□□ -1.95
CCNFP41002 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCNFP41002 Y_RNA.91-201ENST00000363042 107 ntBASIC2.87□□□□□ -1.95
CCNFP41002 RNU6-484P-201ENST00000384016 107 ntBASIC2.87□□□□□ -1.95
CCNFP41002 RNU2-55P-201ENST00000411146 174 ntBASIC2.87□□□□□ -1.95
CCNFP41002 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CCNFP41002 AC063976.3-201ENST00000426849 329 ntBASIC2.87□□□□□ -1.95
CCNFP41002 AL353689.1-201ENST00000438895 199 ntBASIC2.87□□□□□ -1.95
CCNFP41002 RNU7-149P-201ENST00000516739 59 ntBASIC2.87□□□□□ -1.95
CCNFP41002 MIR6079-201ENST00000635807 62 ntBASIC2.87□□□□□ -1.95
CCNFP41002 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
CCNFP41002 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.86□□□□□ -1.95
CCNFP41002 AC009487.2-201ENST00000420969 6821 ntBASIC2.86□□□□□ -1.95
CCNFP41002 RNY1P11-201ENST00000363759 113 ntBASIC2.86□□□□□ -1.95
CCNFP41002 SNORA25.7-201ENST00000364375 127 ntBASIC2.86□□□□□ -1.95
CCNFP41002 Y_RNA.510-201ENST00000384511 114 ntBASIC2.86□□□□□ -1.95
CCNFP41002 SNORA22C-201ENST00000384614 134 ntBASIC2.86□□□□□ -1.95
CCNFP41002 SNORA12.1-201ENST00000390873 148 ntBASIC2.86□□□□□ -1.95
CCNFP41002 RNU1-131P-201ENST00000458943 161 ntBASIC2.86□□□□□ -1.95
CCNFP41002 AC003982.1-202ENST00000469928 248 ntBASIC2.86□□□□□ -1.95
CCNFP41002 SNORD77.4-201ENST00000516158 81 ntBASIC2.86□□□□□ -1.95
CCNFP41002 RNU6-479P-201ENST00000516348 105 ntBASIC2.86□□□□□ -1.95
CCNFP41002 RNU6-1234P-201ENST00000516877 103 ntBASIC2.86□□□□□ -1.95
CCNFP41002 RNU7-128P-201ENST00000517247 62 ntBASIC2.86□□□□□ -1.95
CCNFP41002 AP001328.1-201ENST00000528550 176 ntBASIC2.86□□□□□ -1.95
CCNFP41002 MIR3126-201ENST00000577443 74 ntBASIC2.86□□□□□ -1.95
CCNFP41002 MIR6852-201ENST00000621699 66 ntBASIC2.86□□□□□ -1.95
CCNFP41002 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCNFP41002 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCNFP41002 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCNFP41002 AC018630.2-201ENST00000534866 2403 ntBASIC2.85□□□□□ -1.95
CCNFP41002 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CCNFP41002 RNU6-862P-201ENST00000362804 105 ntBASIC2.85□□□□□ -1.95
CCNFP41002 RNU6-1290P-201ENST00000362957 109 ntBASIC2.85□□□□□ -1.95
CCNFP41002 RNU6-23P-201ENST00000363283 107 ntBASIC2.85□□□□□ -1.95
CCNFP41002 SNRPGP10-201ENST00000432323 225 ntBASIC2.85□□□□□ -1.95
CCNFP41002 AC245047.4-201ENST00000433189 144 ntBASIC2.85□□□□□ -1.95
CCNFP41002 AL109933.2-201ENST00000452651 260 ntBASIC2.85□□□□□ -1.95
CCNFP41002 RNU7-197P-201ENST00000458836 62 ntBASIC2.85□□□□□ -1.95
CCNFP41002 UBE2DNL-203ENST00000474922 222 ntBASIC2.85□□□□□ -1.95
CCNFP41002 OR9P1P-201ENST00000496431 281 ntBASIC2.85□□□□□ -1.95
CCNFP41002 RN7SL636P-201ENST00000497504 294 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms