Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RNU4-80P-201ENST00000363200 141 ntBASIC2.28□□□□□ -2.04
COL15A1P39059 RNU6-23P-201ENST00000363283 107 ntBASIC2.28□□□□□ -2.04
COL15A1P39059 SNORD114-6-201ENST00000364393 72 ntBASIC2.28□□□□□ -2.04
COL15A1P39059 Y_RNA.307-201ENST00000365022 117 ntBASIC2.28□□□□□ -2.04
COL15A1P39059 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.28□□□□□ -2.04
COL15A1P39059 RNU1-131P-201ENST00000458943 161 ntBASIC2.28□□□□□ -2.04
COL15A1P39059 AC011406.1-201ENST00000512440 370 ntBASIC2.28□□□□□ -2.04
COL15A1P39059 RNU6-1041P-201ENST00000516254 102 ntBASIC2.28□□□□□ -2.04
COL15A1P39059 RNA5SP137-201ENST00000516833 135 ntBASIC2.28□□□□□ -2.04
COL15A1P39059 RNU6-1271P-201ENST00000517049 105 ntBASIC2.28□□□□□ -2.04
COL15A1P39059 AC012433.1-201ENST00000588916 398 ntBASIC2.28□□□□□ -2.04
COL15A1P39059 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.28□□□□□ -2.04
COL15A1P39059 Y_RNA.54-201ENST00000362766 105 ntBASIC2.27□□□□□ -2.05
COL15A1P39059 Y_RNA.136-201ENST00000363444 102 ntBASIC2.27□□□□□ -2.05
COL15A1P39059 RNA5SP493-201ENST00000364115 91 ntBASIC2.27□□□□□ -2.05
COL15A1P39059 Y_RNA.477-201ENST00000384352 108 ntBASIC2.27□□□□□ -2.05
COL15A1P39059 MIR144-201ENST00000384886 86 ntBASIC2.27□□□□□ -2.05
COL15A1P39059 MIR873-201ENST00000401120 77 ntBASIC2.27□□□□□ -2.05
COL15A1P39059 AL355796.1-201ENST00000406706 323 ntBASIC2.27□□□□□ -2.05
COL15A1P39059 MIR548H3-201ENST00000408771 118 ntBASIC2.27□□□□□ -2.05
COL15A1P39059 RNU6-710P-201ENST00000410424 105 ntBASIC2.27□□□□□ -2.05
COL15A1P39059 AC016909.1-201ENST00000415916 166 ntBASIC2.27□□□□□ -2.05
COL15A1P39059 AP1B1P2-201ENST00000416196 106 ntBASIC2.27□□□□□ -2.05
COL15A1P39059 AC060773.1-201ENST00000421698 310 ntBASIC2.27□□□□□ -2.05
COL15A1P39059 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.27□□□□□ -2.05
COL15A1P39059 RPS27P22-201ENST00000478056 241 ntBASIC2.27□□□□□ -2.05
COL15A1P39059 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.27□□□□□ -2.05
COL15A1P39059 MIR4529-201ENST00000578110 78 ntBASIC2.27□□□□□ -2.05
COL15A1P39059 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
COL15A1P39059 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
COL15A1P39059 Y_RNA.418-201ENST00000384029 102 ntBASIC2.26□□□□□ -2.05
COL15A1P39059 Y_RNA.489-201ENST00000384410 101 ntBASIC2.26□□□□□ -2.05
COL15A1P39059 SNORA40.19-201ENST00000390846 128 ntBASIC2.26□□□□□ -2.05
COL15A1P39059 MIR1276-201ENST00000408707 83 ntBASIC2.26□□□□□ -2.05
COL15A1P39059 MTCO1P5-201ENST00000433573 344 ntBASIC2.26□□□□□ -2.05
COL15A1P39059 ATP5J2P3-201ENST00000451550 258 ntBASIC2.26□□□□□ -2.05
COL15A1P39059 SUMO2P18-201ENST00000518873 252 ntBASIC2.26□□□□□ -2.05
COL15A1P39059 AC005828.6-201ENST00000606610 232 ntBASIC2.26□□□□□ -2.05
COL15A1P39059 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.26□□□□□ -2.05
COL15A1P39059 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.26□□□□□ -2.05
COL15A1P39059 AC006435.5-201ENST00000624486 112 ntBASIC2.26□□□□□ -2.05
COL15A1P39059 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.26□□□□□ -2.05
COL15A1P39059 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
COL15A1P39059 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
COL15A1P39059 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
COL15A1P39059 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
COL15A1P39059 SNORA27.1-201ENST00000362604 124 ntBASIC2.25□□□□□ -2.05
COL15A1P39059 RNU6-1164P-201ENST00000364428 107 ntBASIC2.25□□□□□ -2.05
COL15A1P39059 Y_RNA.352-201ENST00000365439 102 ntBASIC2.25□□□□□ -2.05
COL15A1P39059 Y_RNA.447-201ENST00000384184 113 ntBASIC2.25□□□□□ -2.05
COL15A1P39059 SNORA67.5-201ENST00000391036 107 ntBASIC2.25□□□□□ -2.05
COL15A1P39059 RNA5SP20-201ENST00000515976 84 ntBASIC2.25□□□□□ -2.05
COL15A1P39059 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.25□□□□□ -2.05
COL15A1P39059 AP005660.1-201ENST00000522972 293 ntBASIC2.25□□□□□ -2.05
COL15A1P39059 AL137100.2-201ENST00000555786 315 ntBASIC2.25□□□□□ -2.05
COL15A1P39059 RPL21P9-201ENST00000556149 474 ntBASIC2.25□□□□□ -2.05
COL15A1P39059 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.25□□□□□ -2.05
COL15A1P39059 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.25□□□□□ -2.05
COL15A1P39059 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
COL15A1P39059 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
COL15A1P39059 RNU1-58P-201ENST00000362413 163 ntBASIC2.24□□□□□ -2.05
COL15A1P39059 Y_RNA.44-201ENST00000362676 108 ntBASIC2.24□□□□□ -2.05
COL15A1P39059 SNORD27-201ENST00000363981 72 ntBASIC2.24□□□□□ -2.05
COL15A1P39059 Y_RNA.476-201ENST00000384347 108 ntBASIC2.24□□□□□ -2.05
COL15A1P39059 Y_RNA.518-201ENST00000384552 113 ntBASIC2.24□□□□□ -2.05
COL15A1P39059 RNU6-417P-201ENST00000384712 107 ntBASIC2.24□□□□□ -2.05
COL15A1P39059 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.24□□□□□ -2.05
COL15A1P39059 RNU6-855P-201ENST00000410395 104 ntBASIC2.24□□□□□ -2.05
COL15A1P39059 BX510359.4-201ENST00000423750 193 ntBASIC2.24□□□□□ -2.05
COL15A1P39059 AL353689.1-201ENST00000438895 199 ntBASIC2.24□□□□□ -2.05
COL15A1P39059 AC010409.1-201ENST00000487382 476 ntBASIC2.24□□□□□ -2.05
COL15A1P39059 AC091959.1-201ENST00000495857 238 ntBASIC2.24□□□□□ -2.05
COL15A1P39059 MIR3128-201ENST00000581957 66 ntBASIC2.24□□□□□ -2.05
COL15A1P39059 MIR3935-201ENST00000583472 104 ntBASIC2.24□□□□□ -2.05
COL15A1P39059 MIR6840-201ENST00000611937 71 ntBASIC2.24□□□□□ -2.05
COL15A1P39059 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL15A1P39059 snoU2-30.2-201ENST00000362805 70 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 Y_RNA.124-201ENST00000363339 93 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 SNORA20.1-201ENST00000364790 130 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 RNU11-3P-201ENST00000391111 133 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 AC010154.1-201ENST00000425857 269 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 MIR4438-201ENST00000585271 93 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 U2.14-201ENST00000615943 113 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 RMST_2.1-201ENST00000617263 136 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 CENPCP1-201ENST00000533085 2578 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
COL15A1P39059 SNORD114-7-201ENST00000362520 77 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 Y_RNA.416-201ENST00000384014 113 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 Y_RNA.478-201ENST00000384358 107 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 Y_RNA.562-201ENST00000384695 113 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 AL355497.1-201ENST00000406262 551 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 AL603910.2-201ENST00000407268 136 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 RNU2-61P-201ENST00000411069 191 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 POLR2J4-204ENST00000418424 324 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 RPS26P55-201ENST00000471178 356 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 RNU6-191P-201ENST00000516295 94 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.23□□□□□ -2.05
COL15A1P39059 DNAJC19P9-201ENST00000555084 351 ntBASIC2.23□□□□□ -2.05
COL15A1P39059 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms