Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MIR4791-201ENST00000607666 84 ntBASIC-1.24□□□□□ -2.61
SNCAP37840 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.25□□□□□ -2.61
SNCAP37840 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.25□□□□□ -2.61
SNCAP37840 MTCO2P27-201ENST00000420740 428 ntBASIC-1.25□□□□□ -2.61
SNCAP37840 AC018865.2-201ENST00000423631 129 ntBASIC-1.25□□□□□ -2.61
SNCAP37840 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.25□□□□□ -2.61
SNCAP37840 MTND4P18-201ENST00000447010 465 ntBASIC-1.25□□□□□ -2.61
SNCAP37840 RNU6-329P-201ENST00000459618 107 ntBASIC-1.25□□□□□ -2.61
SNCAP37840 RNU6-138P-201ENST00000515952 107 ntBASIC-1.25□□□□□ -2.61
SNCAP37840 RNU6-475P-201ENST00000516073 104 ntBASIC-1.25□□□□□ -2.61
SNCAP37840 RNU6-1003P-201ENST00000517099 105 ntBASIC-1.25□□□□□ -2.61
SNCAP37840 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.25□□□□□ -2.61
SNCAP37840 MTND4LP25-201ENST00000570218 163 ntBASIC-1.25□□□□□ -2.61
SNCAP37840 AC105081.1-201ENST00000617727 106 ntBASIC-1.25□□□□□ -2.61
SNCAP37840 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.25□□□□□ -2.61
SNCAP37840 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.26□□□□□ -2.61
SNCAP37840 MIR518F-201ENST00000384973 87 ntBASIC-1.26□□□□□ -2.61
SNCAP37840 MIR522-201ENST00000385071 87 ntBASIC-1.26□□□□□ -2.61
SNCAP37840 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.26□□□□□ -2.61
SNCAP37840 AF186996.7-201ENST00000492781 209 ntBASIC-1.26□□□□□ -2.61
SNCAP37840 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.26□□□□□ -2.61
SNCAP37840 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.26□□□□□ -2.61
SNCAP37840 RNU2-13P-201ENST00000515909 113 ntBASIC-1.26□□□□□ -2.61
SNCAP37840 RNA5SP20-201ENST00000515976 84 ntBASIC-1.26□□□□□ -2.61
SNCAP37840 AC137590.2-201ENST00000619709 240 ntBASIC-1.26□□□□□ -2.61
SNCAP37840 AC023510.2-201ENST00000622162 746 ntBASIC-1.26□□□□□ -2.61
SNCAP37840 AC019226.2-201ENST00000625973 424 ntBASIC-1.26□□□□□ -2.61
SNCAP37840 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.27□□□□□ -2.61
SNCAP37840 MIR30D-201ENST00000362283 70 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 RNU6-560P-201ENST00000364007 108 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 RNU4-36P-201ENST00000364294 144 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 RNU6-224P-201ENST00000384055 107 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 MIR588-201ENST00000384900 83 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.27□□□□□ -2.61
SNCAP37840 MIR1265-201ENST00000408444 86 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.27□□□□□ -2.61
SNCAP37840 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.27□□□□□ -2.61
SNCAP37840 AC108059.2-201ENST00000434626 151 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 AL137792.2-201ENST00000443484 235 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.27□□□□□ -2.61
SNCAP37840 SCARNA18-201ENST00000459004 134 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 RNA5SP337-201ENST00000517007 109 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 SNORA25.17-201ENST00000517184 124 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 MTND4P33-201ENST00000556706 766 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 AGGF1P4-201ENST00000568249 801 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 AL359999.1-201ENST00000604513 294 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 AC121334.2-201ENST00000605387 271 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 RMST_3.1-201ENST00000611651 109 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 AC006441.5-201ENST00000612680 209 ntBASIC-1.27□□□□□ -2.61
SNCAP37840 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.28□□□□□ -2.61
SNCAP37840 SNORD50B-201ENST00000364995 70 ntBASIC-1.28□□□□□ -2.61
SNCAP37840 RNU6-715P-201ENST00000365204 103 ntBASIC-1.28□□□□□ -2.61
SNCAP37840 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.28□□□□□ -2.61
SNCAP37840 MIR450B-201ENST00000401182 78 ntBASIC-1.28□□□□□ -2.61
SNCAP37840 MTCO2P8-201ENST00000412213 658 ntBASIC-1.28□□□□□ -2.61
SNCAP37840 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.28□□□□□ -2.61
SNCAP37840 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.28□□□□□ -2.61
SNCAP37840 AC021146.6-201ENST00000514659 117 ntBASIC-1.28□□□□□ -2.61
SNCAP37840 SNORA27.4-201ENST00000516650 95 ntBASIC-1.28□□□□□ -2.61
SNCAP37840 IGKV1-22-201ENST00000524313 326 ntBASIC-1.28□□□□□ -2.61
SNCAP37840 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.28□□□□□ -2.61
SNCAP37840 AP000811.1-201ENST00000603803 651 ntBASIC-1.28□□□□□ -2.61
SNCAP37840 AL445984.1-201ENST00000637834 659 ntBASIC-1.28□□□□□ -2.61
SNCAP37840 ZNF299P-201ENST00000406845 1804 ntBASIC-1.29□□□□□ -2.62
SNCAP37840 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.29□□□□□ -2.62
SNCAP37840 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.29□□□□□ -2.62
SNCAP37840 RNU6-291P-201ENST00000384720 107 ntBASIC-1.29□□□□□ -2.62
SNCAP37840 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.29□□□□□ -2.62
SNCAP37840 MIR558-201ENST00000384920 94 ntBASIC-1.29□□□□□ -2.62
SNCAP37840 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.29□□□□□ -2.62
SNCAP37840 MTND4P3-201ENST00000417829 541 ntBASIC-1.29□□□□□ -2.62
SNCAP37840 MTND1P14-201ENST00000427400 950 ntBASIC-1.29□□□□□ -2.62
SNCAP37840 RPL7P42-201ENST00000481005 679 ntBASIC-1.29□□□□□ -2.62
SNCAP37840 RPL39P5-202ENST00000512505 151 ntBASIC-1.29□□□□□ -2.62
SNCAP37840 AL121992.2-201ENST00000606262 256 ntBASIC-1.29□□□□□ -2.62
SNCAP37840 AC009159.2-201ENST00000617603 606 ntBASIC-1.29□□□□□ -2.62
SNCAP37840 AC022960.3-201ENST00000619794 441 ntBASIC-1.29□□□□□ -2.62
SNCAP37840 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.3□□□□□ -2.62
SNCAP37840 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.3□□□□□ -2.62
SNCAP37840 SNORA27.1-201ENST00000362604 124 ntBASIC-1.3□□□□□ -2.62
SNCAP37840 RNU6-723P-201ENST00000383973 107 ntBASIC-1.3□□□□□ -2.62
SNCAP37840 RNU6-245P-201ENST00000384020 107 ntBASIC-1.3□□□□□ -2.62
SNCAP37840 RNU6-116P-201ENST00000384042 109 ntBASIC-1.3□□□□□ -2.62
SNCAP37840 RNU6-136P-201ENST00000384663 107 ntBASIC-1.3□□□□□ -2.62
SNCAP37840 U8.17-201ENST00000391292 132 ntBASIC-1.3□□□□□ -2.62
SNCAP37840 MTCYBP36-201ENST00000404146 440 ntBASIC-1.3□□□□□ -2.62
SNCAP37840 RNU6-855P-201ENST00000410395 104 ntBASIC-1.3□□□□□ -2.62
SNCAP37840 RNU4-83P-201ENST00000410863 133 ntBASIC-1.3□□□□□ -2.62
SNCAP37840 SSR1P2-201ENST00000415208 787 ntBASIC-1.3□□□□□ -2.62
SNCAP37840 AL500527.2-201ENST00000454105 95 ntBASIC-1.3□□□□□ -2.62
SNCAP37840 snoU13.2-201ENST00000459201 104 ntBASIC-1.3□□□□□ -2.62
SNCAP37840 AC018710.1-201ENST00000506509 158 ntBASIC-1.3□□□□□ -2.62
SNCAP37840 POLR3GP1-201ENST00000594073 261 ntBASIC-1.3□□□□□ -2.62
SNCAP37840 BNIP3P39-201ENST00000601077 554 ntBASIC-1.3□□□□□ -2.62
SNCAP37840 AC131235.4-201ENST00000609288 620 ntBASIC-1.3□□□□□ -2.62
SNCAP37840 RNU6-490P-201ENST00000362985 107 ntBASIC-1.31□□□□□ -2.62
SNCAP37840 RNU6-433P-201ENST00000363216 104 ntBASIC-1.31□□□□□ -2.62
SNCAP37840 RNU4-1-201ENST00000363925 141 ntBASIC-1.31□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms