Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
HOXC12P31275 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HOXC12P31275 MIR148B-201ENST00000362252 99 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 RNU6-1209P-201ENST00000363655 107 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 Y_RNA.796-201ENST00000364268 102 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 Y_RNA.799-201ENST00000364992 102 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 SNORA7.4-201ENST00000384249 137 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 Y_RNA.497-201ENST00000384447 98 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 Y_RNA.521-201ENST00000384560 114 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 RPL21P3-201ENST00000395517 478 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC12P31275 AC018634.1-201ENST00000437554 401 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.72□□□□□ -1.97
HOXC12P31275 AC107016.2-201ENST00000547968 190 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 MIR3169-201ENST00000578032 83 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 MIR4446-201ENST00000578505 67 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 UBL5P2-201ENST00000583788 219 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 AC091178.2-201ENST00000584401 117 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 AL021707.8-201ENST00000609428 183 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 JPX_2.1-201ENST00000614161 69 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 MIR6079-201ENST00000635807 62 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 MIR3658-201ENST00000636291 56 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.72□□□□□ -1.97
HOXC12P31275 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
HOXC12P31275 AC018630.2-201ENST00000534866 2403 ntBASIC2.71□□□□□ -1.98
HOXC12P31275 ZNF271P-202ENST00000465539 1970 ntBASIC2.71□□□□□ -1.98
HOXC12P31275 RNU6-199P-201ENST00000362954 107 ntBASIC2.71□□□□□ -1.98
HOXC12P31275 RNU4-11P-201ENST00000365287 132 ntBASIC2.71□□□□□ -1.98
HOXC12P31275 SNORD37.2-201ENST00000391075 66 ntBASIC2.71□□□□□ -1.98
HOXC12P31275 RNU6-131P-201ENST00000391144 107 ntBASIC2.71□□□□□ -1.98
HOXC12P31275 RNA5SP274-201ENST00000410484 108 ntBASIC2.71□□□□□ -1.98
HOXC12P31275 CST2P1-201ENST00000425770 87 ntBASIC2.71□□□□□ -1.98
HOXC12P31275 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXC12P31275 uc_338.4-201ENST00000616635 176 ntBASIC2.71□□□□□ -1.98
HOXC12P31275 MIR22-201ENST00000362190 85 ntBASIC2.7□□□□□ -1.98
HOXC12P31275 SNORA67.1-201ENST00000364749 141 ntBASIC2.7□□□□□ -1.98
HOXC12P31275 RNU1-138P-201ENST00000384093 164 ntBASIC2.7□□□□□ -1.98
HOXC12P31275 RNU1-148P-201ENST00000384472 162 ntBASIC2.7□□□□□ -1.98
HOXC12P31275 MIR515-2-201ENST00000384883 83 ntBASIC2.7□□□□□ -1.98
HOXC12P31275 MIR515-1-201ENST00000384884 83 ntBASIC2.7□□□□□ -1.98
HOXC12P31275 MIR524-201ENST00000385242 87 ntBASIC2.7□□□□□ -1.98
HOXC12P31275 SNORD67-201ENST00000390833 111 ntBASIC2.7□□□□□ -1.98
HOXC12P31275 RNU4-43P-201ENST00000410628 137 ntBASIC2.7□□□□□ -1.98
HOXC12P31275 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXC12P31275 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC12P31275 AL163195.1-201ENST00000496941 348 ntBASIC2.7□□□□□ -1.98
HOXC12P31275 RNU6-1299P-201ENST00000516316 100 ntBASIC2.7□□□□□ -1.98
HOXC12P31275 GTF3AP2-201ENST00000557014 266 ntBASIC2.7□□□□□ -1.98
HOXC12P31275 MIR548X2-201ENST00000579776 100 ntBASIC2.7□□□□□ -1.98
HOXC12P31275 ZNF702P-202ENST00000434269 1966 ntBASIC2.69□□□□□ -1.98
HOXC12P31275 RNU2-55P-201ENST00000411146 174 ntBASIC2.69□□□□□ -1.98
HOXC12P31275 RNA5SP272-201ENST00000516095 111 ntBASIC2.69□□□□□ -1.98
HOXC12P31275 RNU6-341P-201ENST00000516973 96 ntBASIC2.69□□□□□ -1.98
HOXC12P31275 ELOCP29-201ENST00000588193 334 ntBASIC2.69□□□□□ -1.98
HOXC12P31275 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.69□□□□□ -1.98
HOXC12P31275 AC091895.1-201ENST00000624494 256 ntBASIC2.69□□□□□ -1.98
HOXC12P31275 AP006437.1-201ENST00000641440 3685 ntBASIC2.69□□□□□ -1.98
HOXC12P31275 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HOXC12P31275 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
HOXC12P31275 SNORD56.3-201ENST00000363507 71 ntBASIC2.68□□□□□ -1.98
HOXC12P31275 Y_RNA.432-201ENST00000384087 111 ntBASIC2.68□□□□□ -1.98
HOXC12P31275 Y_RNA.568-201ENST00000384742 113 ntBASIC2.68□□□□□ -1.98
HOXC12P31275 MIR29C-201ENST00000385231 88 ntBASIC2.68□□□□□ -1.98
HOXC12P31275 MIR513C-201ENST00000401352 84 ntBASIC2.68□□□□□ -1.98
HOXC12P31275 RPS27P1-201ENST00000450552 247 ntBASIC2.68□□□□□ -1.98
HOXC12P31275 SNORD11-201ENST00000459124 84 ntBASIC2.68□□□□□ -1.98
HOXC12P31275 RNU6-426P-201ENST00000516464 97 ntBASIC2.68□□□□□ -1.98
HOXC12P31275 AC024995.1-201ENST00000523014 93 ntBASIC2.68□□□□□ -1.98
HOXC12P31275 MIR4658-201ENST00000584344 65 ntBASIC2.68□□□□□ -1.98
HOXC12P31275 MIR203B-201ENST00000636080 86 ntBASIC2.68□□□□□ -1.98
HOXC12P31275 MIR6844-201ENST00000637122 62 ntBASIC2.68□□□□□ -1.98
HOXC12P31275 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HOXC12P31275 RNU1-58P-201ENST00000362413 163 ntBASIC2.67□□□□□ -1.98
HOXC12P31275 RNU6-768P-201ENST00000384683 107 ntBASIC2.67□□□□□ -1.98
HOXC12P31275 EEF1A1P41-201ENST00000414667 207 ntBASIC2.67□□□□□ -1.98
HOXC12P31275 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXC12P31275 BX510359.4-201ENST00000423750 193 ntBASIC2.67□□□□□ -1.98
HOXC12P31275 AC099677.2-201ENST00000436385 175 ntBASIC2.67□□□□□ -1.98
HOXC12P31275 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.67□□□□□ -1.98
HOXC12P31275 RNU7-94P-201ENST00000459576 63 ntBASIC2.67□□□□□ -1.98
HOXC12P31275 TRBV12-1-201ENST00000479785 344 ntBASIC2.67□□□□□ -1.98
HOXC12P31275 HMGN1P7-201ENST00000491722 313 ntBASIC2.67□□□□□ -1.98
HOXC12P31275 SNORA25.12-201ENST00000516202 82 ntBASIC2.67□□□□□ -1.98
HOXC12P31275 AC104027.1-201ENST00000521887 300 ntBASIC2.67□□□□□ -1.98
HOXC12P31275 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXC12P31275 MIR378D2-201ENST00000580636 98 ntBASIC2.67□□□□□ -1.98
HOXC12P31275 AL049779.4-201ENST00000604500 156 ntBASIC2.67□□□□□ -1.98
HOXC12P31275 Pinc.1-201ENST00000616452 154 ntBASIC2.67□□□□□ -1.98
HOXC12P31275 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
HOXC12P31275 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXC12P31275 RNU6-484P-201ENST00000384016 107 ntBASIC2.66□□□□□ -1.98
HOXC12P31275 MIR562-201ENST00000384894 95 ntBASIC2.66□□□□□ -1.98
HOXC12P31275 MIR569-201ENST00000385228 96 ntBASIC2.66□□□□□ -1.98
HOXC12P31275 SNORA11.4-201ENST00000408823 129 ntBASIC2.66□□□□□ -1.98
HOXC12P31275 RNU2-70P-201ENST00000410718 179 ntBASIC2.66□□□□□ -1.98
HOXC12P31275 MLLT10P1-201ENST00000418346 262 ntBASIC2.66□□□□□ -1.98
HOXC12P31275 RNA5SP367-201ENST00000516557 118 ntBASIC2.66□□□□□ -1.98
HOXC12P31275 RNU6-197P-201ENST00000516680 100 ntBASIC2.66□□□□□ -1.98
HOXC12P31275 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXC12P31275 AC112693.2-201ENST00000556538 232 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms