Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 MIR3198-2-201ENST00000577868 80 ntBASIC1.9□□□□□ -2.11
CSF1P09603 AC091178.2-201ENST00000584401 117 ntBASIC1.9□□□□□ -2.11
CSF1P09603 AC022217.4-201ENST00000604389 163 ntBASIC1.9□□□□□ -2.11
CSF1P09603 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CSF1P09603 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CSF1P09603 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
CSF1P09603 Y_RNA.47-201ENST00000362697 108 ntBASIC1.89□□□□□ -2.11
CSF1P09603 RNU4-80P-201ENST00000363200 141 ntBASIC1.89□□□□□ -2.11
CSF1P09603 RNU6-238P-201ENST00000363313 106 ntBASIC1.89□□□□□ -2.11
CSF1P09603 RNU4-13P-201ENST00000364019 141 ntBASIC1.89□□□□□ -2.11
CSF1P09603 MIR30A-201ENST00000385092 71 ntBASIC1.89□□□□□ -2.11
CSF1P09603 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CSF1P09603 MIR1302-6-201ENST00000408466 90 ntBASIC1.89□□□□□ -2.11
CSF1P09603 COX6CP10-201ENST00000416832 224 ntBASIC1.89□□□□□ -2.11
CSF1P09603 MTCYBP9-201ENST00000431021 303 ntBASIC1.89□□□□□ -2.11
CSF1P09603 RPS20P10-201ENST00000451209 253 ntBASIC1.89□□□□□ -2.11
CSF1P09603 AL021397.1-201ENST00000451806 248 ntBASIC1.89□□□□□ -2.11
CSF1P09603 snoU13.27-201ENST00000459278 104 ntBASIC1.89□□□□□ -2.11
CSF1P09603 AC015720.1-201ENST00000565251 277 ntBASIC1.89□□□□□ -2.11
CSF1P09603 MIR3145-201ENST00000580727 82 ntBASIC1.89□□□□□ -2.11
CSF1P09603 AC103810.8-201ENST00000607347 118 ntBASIC1.89□□□□□ -2.11
CSF1P09603 AC004832.4-201ENST00000608952 331 ntBASIC1.89□□□□□ -2.11
CSF1P09603 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CSF1P09603 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CSF1P09603 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CSF1P09603 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
CSF1P09603 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.88□□□□□ -2.11
CSF1P09603 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CSF1P09603 Y_RNA.310-201ENST00000365063 113 ntBASIC1.88□□□□□ -2.11
CSF1P09603 Y_RNA.461-201ENST00000384263 103 ntBASIC1.88□□□□□ -2.11
CSF1P09603 SNORD116-13-201ENST00000384408 92 ntBASIC1.88□□□□□ -2.11
CSF1P09603 Y_RNA.556-201ENST00000384677 113 ntBASIC1.88□□□□□ -2.11
CSF1P09603 RNA5SP109-201ENST00000391010 116 ntBASIC1.88□□□□□ -2.11
CSF1P09603 SNORA48.3-201ENST00000391081 134 ntBASIC1.88□□□□□ -2.11
CSF1P09603 HMGN2P38-201ENST00000423806 265 ntBASIC1.88□□□□□ -2.11
CSF1P09603 MTCO1P5-201ENST00000433573 344 ntBASIC1.88□□□□□ -2.11
CSF1P09603 AC091021.1-201ENST00000468051 388 ntBASIC1.88□□□□□ -2.11
CSF1P09603 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.88□□□□□ -2.11
CSF1P09603 RNU6-1338P-201ENST00000516328 91 ntBASIC1.88□□□□□ -2.11
CSF1P09603 RNA5SP281-201ENST00000516504 135 ntBASIC1.88□□□□□ -2.11
CSF1P09603 RNU6-63P-201ENST00000516690 95 ntBASIC1.88□□□□□ -2.11
CSF1P09603 RNU6-570P-201ENST00000517051 105 ntBASIC1.88□□□□□ -2.11
CSF1P09603 AP002004.2-201ENST00000531656 154 ntBASIC1.88□□□□□ -2.11
CSF1P09603 AL162424.1-201ENST00000602325 221 ntBASIC1.88□□□□□ -2.11
CSF1P09603 AC005972.2-201ENST00000604690 348 ntBASIC1.88□□□□□ -2.11
CSF1P09603 MIR8074-201ENST00000615081 81 ntBASIC1.88□□□□□ -2.11
CSF1P09603 AC009831.4-201ENST00000620744 325 ntBASIC1.88□□□□□ -2.11
CSF1P09603 Y_RNA.376-201ENST00000365638 108 ntBASIC1.87□□□□□ -2.11
CSF1P09603 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CSF1P09603 MIR1267-201ENST00000408723 78 ntBASIC1.87□□□□□ -2.11
CSF1P09603 RN7SKP200-201ENST00000410564 320 ntBASIC1.87□□□□□ -2.11
CSF1P09603 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.87□□□□□ -2.11
CSF1P09603 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.87□□□□□ -2.11
CSF1P09603 AL606517.2-201ENST00000442855 241 ntBASIC1.87□□□□□ -2.11
CSF1P09603 U8.19-201ENST00000459095 133 ntBASIC1.87□□□□□ -2.11
CSF1P09603 SERF1AP1-201ENST00000514575 187 ntBASIC1.87□□□□□ -2.11
CSF1P09603 RNU6-191P-201ENST00000516295 94 ntBASIC1.87□□□□□ -2.11
CSF1P09603 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
CSF1P09603 RNU7-116P-201ENST00000516940 62 ntBASIC1.87□□□□□ -2.11
CSF1P09603 RNU6-1096P-201ENST00000517089 102 ntBASIC1.87□□□□□ -2.11
CSF1P09603 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.87□□□□□ -2.11
CSF1P09603 AC002984.1-201ENST00000591692 448 ntBASIC1.87□□□□□ -2.11
CSF1P09603 MIR8054-201ENST00000620877 86 ntBASIC1.87□□□□□ -2.11
CSF1P09603 MIR6132-201ENST00000622083 109 ntBASIC1.87□□□□□ -2.11
CSF1P09603 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CSF1P09603 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
CSF1P09603 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CSF1P09603 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CSF1P09603 MIR335-201ENST00000362173 94 ntBASIC1.86□□□□□ -2.11
CSF1P09603 Y_RNA.518-201ENST00000384552 113 ntBASIC1.86□□□□□ -2.11
CSF1P09603 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.86□□□□□ -2.11
CSF1P09603 RNA5SP511-201ENST00000410487 115 ntBASIC1.86□□□□□ -2.11
CSF1P09603 RNA5SP338-201ENST00000410495 85 ntBASIC1.86□□□□□ -2.11
CSF1P09603 RNU2-40P-201ENST00000410833 196 ntBASIC1.86□□□□□ -2.11
CSF1P09603 AL591806.2-201ENST00000433122 173 ntBASIC1.86□□□□□ -2.11
CSF1P09603 MTND3P2-201ENST00000438452 342 ntBASIC1.86□□□□□ -2.11
CSF1P09603 AC008834.1-201ENST00000511612 175 ntBASIC1.86□□□□□ -2.11
CSF1P09603 RNU7-28P-201ENST00000516759 62 ntBASIC1.86□□□□□ -2.11
CSF1P09603 AC136628.3-201ENST00000521868 290 ntBASIC1.86□□□□□ -2.11
CSF1P09603 AC015712.3-201ENST00000559380 164 ntBASIC1.86□□□□□ -2.11
CSF1P09603 MIR4709-201ENST00000577272 72 ntBASIC1.86□□□□□ -2.11
CSF1P09603 AL512605.2-201ENST00000592972 256 ntBASIC1.86□□□□□ -2.11
CSF1P09603 SNORA28-201ENST00000606769 126 ntBASIC1.86□□□□□ -2.11
CSF1P09603 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.86□□□□□ -2.11
CSF1P09603 AL078604.3-201ENST00000615580 211 ntBASIC1.86□□□□□ -2.11
CSF1P09603 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.86□□□□□ -2.11
CSF1P09603 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.86□□□□□ -2.11
CSF1P09603 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CSF1P09603 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CSF1P09603 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CSF1P09603 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CSF1P09603 RNU6-1323P-201ENST00000384025 107 ntBASIC1.85□□□□□ -2.11
CSF1P09603 Y_RNA.512-201ENST00000384518 102 ntBASIC1.85□□□□□ -2.11
CSF1P09603 RNU6-482P-201ENST00000391068 107 ntBASIC1.85□□□□□ -2.11
CSF1P09603 RNU2-56P-201ENST00000516826 190 ntBASIC1.85□□□□□ -2.11
CSF1P09603 AL161670.1-201ENST00000554348 137 ntBASIC1.85□□□□□ -2.11
CSF1P09603 AL162730.1-201ENST00000605734 292 ntBASIC1.85□□□□□ -2.11
CSF1P09603 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.85□□□□□ -2.11
CSF1P09603 AC100821.1-201ENST00000523153 2479 ntBASIC1.85□□□□□ -2.11
CSF1P09603 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms