Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AL391813.1-201ENST00000603098 260 ntBASIC2.49□□□□□ -2.01
COL3A1P02461 AP001340.1-201ENST00000624405 217 ntBASIC2.49□□□□□ -2.01
COL3A1P02461 AC068205.3-201ENST00000636385 468 ntBASIC2.49□□□□□ -2.01
COL3A1P02461 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
COL3A1P02461 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
COL3A1P02461 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.49□□□□□ -2.01
COL3A1P02461 RNU6-1205P-201ENST00000363625 106 ntBASIC2.48□□□□□ -2.01
COL3A1P02461 SNORD115-30-201ENST00000364117 82 ntBASIC2.48□□□□□ -2.01
COL3A1P02461 RNU6-728P-201ENST00000365375 104 ntBASIC2.48□□□□□ -2.01
COL3A1P02461 RNA5SP167-201ENST00000365461 116 ntBASIC2.48□□□□□ -2.01
COL3A1P02461 RNU6-969P-201ENST00000383900 105 ntBASIC2.48□□□□□ -2.01
COL3A1P02461 Y_RNA.563-201ENST00000384707 108 ntBASIC2.48□□□□□ -2.01
COL3A1P02461 AC010154.1-201ENST00000425857 269 ntBASIC2.48□□□□□ -2.01
COL3A1P02461 PDCD5P2-201ENST00000507570 312 ntBASIC2.48□□□□□ -2.01
COL3A1P02461 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.48□□□□□ -2.01
COL3A1P02461 RNU6-928P-201ENST00000516876 104 ntBASIC2.48□□□□□ -2.01
COL3A1P02461 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.48□□□□□ -2.01
COL3A1P02461 EIF4A1P12-201ENST00000551910 141 ntBASIC2.48□□□□□ -2.01
COL3A1P02461 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.48□□□□□ -2.01
COL3A1P02461 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL3A1P02461 Y_RNA.572-201ENST00000384757 98 ntBASIC2.47□□□□□ -2.01
COL3A1P02461 MIR1294-201ENST00000408503 142 ntBASIC2.47□□□□□ -2.01
COL3A1P02461 AL161651.1-201ENST00000440882 223 ntBASIC2.47□□□□□ -2.01
COL3A1P02461 AC107626.1-201ENST00000471084 183 ntBASIC2.47□□□□□ -2.01
COL3A1P02461 SNORA70.12-201ENST00000516084 153 ntBASIC2.47□□□□□ -2.01
COL3A1P02461 RNU6-659P-201ENST00000516454 104 ntBASIC2.47□□□□□ -2.01
COL3A1P02461 RNU2-44P-201ENST00000516795 194 ntBASIC2.47□□□□□ -2.01
COL3A1P02461 MIR4724-201ENST00000579485 89 ntBASIC2.47□□□□□ -2.01
COL3A1P02461 MIR5006-201ENST00000583027 110 ntBASIC2.47□□□□□ -2.01
COL3A1P02461 AL034555.1-201ENST00000604816 211 ntBASIC2.47□□□□□ -2.01
COL3A1P02461 RNU6-91P-201ENST00000607774 107 ntBASIC2.47□□□□□ -2.01
COL3A1P02461 AC005562.2-201ENST00000618264 111 ntBASIC2.47□□□□□ -2.01
COL3A1P02461 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
COL3A1P02461 SNORA31-201ENST00000362607 130 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 U3.9-201ENST00000363823 204 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 RNU6-1048P-201ENST00000364054 107 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 SNORD87-201ENST00000364849 89 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 RNU6-1180P-201ENST00000364935 107 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 Y_RNA.310-201ENST00000365063 113 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 RNU6-643P-201ENST00000384018 107 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 RNU6-19P-201ENST00000384718 107 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 MIR15B-201ENST00000385045 98 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 RNA5SP201-201ENST00000410316 124 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 RNU6-855P-201ENST00000410395 104 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 RNU2-37P-201ENST00000410695 177 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.46□□□□□ -2.02
COL3A1P02461 PTGES3P4-201ENST00000426243 356 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 TOMM22P2-201ENST00000430735 237 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 AL135790.2-201ENST00000437701 267 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 AC004386.2-201ENST00000441858 148 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.46□□□□□ -2.02
COL3A1P02461 AC245047.8-201ENST00000456455 284 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 RNU2-56P-201ENST00000516826 190 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 AP001328.1-201ENST00000528550 176 ntBASIC2.46□□□□□ -2.02
COL3A1P02461 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
COL3A1P02461 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
COL3A1P02461 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
COL3A1P02461 SNORD114-19-201ENST00000363072 75 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 RNU6-529P-201ENST00000363383 104 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 RNU6-407P-201ENST00000365280 104 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 Y_RNA.466-201ENST00000384294 113 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 Y_RNA.521-201ENST00000384560 114 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 Y_RNA.540-201ENST00000384638 111 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
COL3A1P02461 AL606845.1-201ENST00000404881 255 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 HMGN2P35-201ENST00000412164 270 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.45□□□□□ -2.02
COL3A1P02461 AL357134.1-201ENST00000445848 426 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 RNU7-197P-201ENST00000458836 62 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 AC092991.1-201ENST00000477176 376 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 RAC1P5-201ENST00000512182 576 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 SNORD19.2-201ENST00000516978 73 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.45□□□□□ -2.02
COL3A1P02461 U6.115-201ENST00000636045 103 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL3A1P02461 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL3A1P02461 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL3A1P02461 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL3A1P02461 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
COL3A1P02461 AL136164.4-201ENST00000625013 2135 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
COL3A1P02461 RNY3P5-201ENST00000384127 102 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 RNU6-748P-201ENST00000384648 107 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 MT-TT-201ENST00000387460 66 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 RNU6-588P-201ENST00000410281 105 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 RNU6-1064P-201ENST00000410626 104 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 RNU7-141P-201ENST00000459304 62 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 AC006483.1-201ENST00000487308 313 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 AC079804.2-201ENST00000490376 200 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 RNU1-117P-201ENST00000517041 158 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 AP004242.1-201ENST00000533701 349 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 AC090049.2-201ENST00000550377 109 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 MIR3690-201ENST00000580266 75 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 AC073308.1-201ENST00000623696 305 ntBASIC2.45□□□□□ -2.02
COL3A1P02461 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.44□□□□□ -2.02
COL3A1P02461 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.44□□□□□ -2.02
COL3A1P02461 AC068700.1-201ENST00000565862 3754 ntBASIC2.44□□□□□ -2.02
COL3A1P02461 RNU6-1010P-201ENST00000362757 107 ntBASIC2.44□□□□□ -2.02
COL3A1P02461 U3.8-201ENST00000363675 217 ntBASIC2.44□□□□□ -2.02
COL3A1P02461 RNU6-270P-201ENST00000364131 105 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms