Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RNVU1-4-201ENST00000612985 164 ntBASIC3.84□□□□□ -1.79
ALDH1A1P00352 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ALDH1A1P00352 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ALDH1A1P00352 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
ALDH1A1P00352 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ALDH1A1P00352 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALDH1A1P00352 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALDH1A1P00352 Y_RNA.242-201ENST00000364473 110 ntBASIC3.83□□□□□ -1.8
ALDH1A1P00352 RNU6-1274P-201ENST00000384557 107 ntBASIC3.83□□□□□ -1.8
ALDH1A1P00352 RNU6-402P-201ENST00000410678 103 ntBASIC3.83□□□□□ -1.8
ALDH1A1P00352 RNU6-938P-201ENST00000411285 103 ntBASIC3.83□□□□□ -1.8
ALDH1A1P00352 AC113410.1-201ENST00000505029 247 ntBASIC3.83□□□□□ -1.8
ALDH1A1P00352 RNU7-6P-201ENST00000516845 62 ntBASIC3.83□□□□□ -1.8
ALDH1A1P00352 AC087685.1-201ENST00000587507 141 ntBASIC3.83□□□□□ -1.8
ALDH1A1P00352 MIR6076-201ENST00000617521 113 ntBASIC3.83□□□□□ -1.8
ALDH1A1P00352 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
ALDH1A1P00352 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALDH1A1P00352 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ALDH1A1P00352 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALDH1A1P00352 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ALDH1A1P00352 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ALDH1A1P00352 RNA5SP322-201ENST00000363617 119 ntBASIC3.82□□□□□ -1.8
ALDH1A1P00352 Y_RNA.437-201ENST00000384113 113 ntBASIC3.82□□□□□ -1.8
ALDH1A1P00352 Y_RNA.531-201ENST00000384589 121 ntBASIC3.82□□□□□ -1.8
ALDH1A1P00352 AC006989.1-201ENST00000427212 131 ntBASIC3.82□□□□□ -1.8
ALDH1A1P00352 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.82□□□□□ -1.8
ALDH1A1P00352 AC010401.1-201ENST00000463867 348 ntBASIC3.82□□□□□ -1.8
ALDH1A1P00352 RNU2-35P-201ENST00000516446 142 ntBASIC3.82□□□□□ -1.8
ALDH1A1P00352 MIR4694-201ENST00000578534 80 ntBASIC3.82□□□□□ -1.8
ALDH1A1P00352 MIR4644-201ENST00000579929 84 ntBASIC3.82□□□□□ -1.8
ALDH1A1P00352 MIR548Z-201ENST00000584743 97 ntBASIC3.82□□□□□ -1.8
ALDH1A1P00352 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALDH1A1P00352 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.82□□□□□ -1.8
ALDH1A1P00352 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.82□□□□□ -1.8
ALDH1A1P00352 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
ALDH1A1P00352 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
ALDH1A1P00352 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.82□□□□□ -1.8
ALDH1A1P00352 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.82□□□□□ -1.8
ALDH1A1P00352 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ALDH1A1P00352 RNU6-832P-201ENST00000363319 107 ntBASIC3.81□□□□□ -1.8
ALDH1A1P00352 MIR577-201ENST00000385196 96 ntBASIC3.81□□□□□ -1.8
ALDH1A1P00352 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ALDH1A1P00352 RNU1-131P-201ENST00000458943 161 ntBASIC3.81□□□□□ -1.8
ALDH1A1P00352 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.81□□□□□ -1.8
ALDH1A1P00352 RNA5SP356-201ENST00000515972 94 ntBASIC3.81□□□□□ -1.8
ALDH1A1P00352 AP000867.2-201ENST00000532468 320 ntBASIC3.81□□□□□ -1.8
ALDH1A1P00352 AC026333.2-201ENST00000542164 106 ntBASIC3.81□□□□□ -1.8
ALDH1A1P00352 MIR3683-201ENST00000580847 82 ntBASIC3.81□□□□□ -1.8
ALDH1A1P00352 AC073413.2-201ENST00000604332 360 ntBASIC3.81□□□□□ -1.8
ALDH1A1P00352 AC087741.2-201ENST00000619415 172 ntBASIC3.81□□□□□ -1.8
ALDH1A1P00352 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ALDH1A1P00352 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.81□□□□□ -1.8
ALDH1A1P00352 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
ALDH1A1P00352 PWAR6-201ENST00000552334 4618 ntBASIC3.8□□□□□ -1.8
ALDH1A1P00352 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ALDH1A1P00352 ZNF271P-202ENST00000465539 1970 ntBASIC3.8□□□□□ -1.8
ALDH1A1P00352 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ALDH1A1P00352 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.8□□□□□ -1.8
ALDH1A1P00352 RNU1-96P-201ENST00000364163 162 ntBASIC3.8□□□□□ -1.8
ALDH1A1P00352 RNA5SP42-201ENST00000364278 115 ntBASIC3.8□□□□□ -1.8
ALDH1A1P00352 RNU6-219P-201ENST00000364728 107 ntBASIC3.8□□□□□ -1.8
ALDH1A1P00352 SNORD116-22-201ENST00000384430 92 ntBASIC3.8□□□□□ -1.8
ALDH1A1P00352 MIR548O-201ENST00000408583 114 ntBASIC3.8□□□□□ -1.8
ALDH1A1P00352 BTF3P4-201ENST00000418852 495 ntBASIC3.8□□□□□ -1.8
ALDH1A1P00352 Z98742.2-201ENST00000431564 187 ntBASIC3.8□□□□□ -1.8
ALDH1A1P00352 RPL30P14-201ENST00000482744 348 ntBASIC3.8□□□□□ -1.8
ALDH1A1P00352 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.8□□□□□ -1.8
ALDH1A1P00352 RNU6-267P-201ENST00000516714 103 ntBASIC3.8□□□□□ -1.8
ALDH1A1P00352 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
ALDH1A1P00352 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ALDH1A1P00352 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ALDH1A1P00352 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ALDH1A1P00352 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ALDH1A1P00352 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
ALDH1A1P00352 AC002546.1-201ENST00000588041 2504 ntBASIC3.79□□□□□ -1.8
ALDH1A1P00352 SNORD115-35-201ENST00000365122 82 ntBASIC3.79□□□□□ -1.8
ALDH1A1P00352 Y_RNA.507-201ENST00000384500 99 ntBASIC3.79□□□□□ -1.8
ALDH1A1P00352 RNU1-89P-201ENST00000384592 164 ntBASIC3.79□□□□□ -1.8
ALDH1A1P00352 RNU6-788P-201ENST00000390967 104 ntBASIC3.79□□□□□ -1.8
ALDH1A1P00352 SNORA48.8-201ENST00000391324 134 ntBASIC3.79□□□□□ -1.8
ALDH1A1P00352 AC008885.1-201ENST00000514930 301 ntBASIC3.79□□□□□ -1.8
ALDH1A1P00352 RNU7-70P-201ENST00000516941 66 ntBASIC3.79□□□□□ -1.8
ALDH1A1P00352 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.79□□□□□ -1.8
ALDH1A1P00352 AL359075.3-201ENST00000613288 217 ntBASIC3.79□□□□□ -1.8
ALDH1A1P00352 MIR4662A-201ENST00000637499 67 ntBASIC3.79□□□□□ -1.8
ALDH1A1P00352 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ALDH1A1P00352 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
ALDH1A1P00352 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ALDH1A1P00352 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.78□□□□□ -1.8
ALDH1A1P00352 SNORD115-13-201ENST00000363358 82 ntBASIC3.78□□□□□ -1.8
ALDH1A1P00352 SNORD115-16-201ENST00000363887 82 ntBASIC3.78□□□□□ -1.8
ALDH1A1P00352 Y_RNA.190-201ENST00000363964 101 ntBASIC3.78□□□□□ -1.8
ALDH1A1P00352 SNORD115-1-201ENST00000364961 82 ntBASIC3.78□□□□□ -1.8
ALDH1A1P00352 Y_RNA.360-201ENST00000365512 102 ntBASIC3.78□□□□□ -1.8
ALDH1A1P00352 RNU6-438P-201ENST00000365561 103 ntBASIC3.78□□□□□ -1.8
ALDH1A1P00352 AC099677.2-201ENST00000436385 175 ntBASIC3.78□□□□□ -1.8
ALDH1A1P00352 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.78□□□□□ -1.8
ALDH1A1P00352 AC233266.1-201ENST00000454518 96 ntBASIC3.78□□□□□ -1.8
ALDH1A1P00352 MIR3618-201ENST00000580330 88 ntBASIC3.78□□□□□ -1.8
ALDH1A1P00352 ELOCP29-201ENST00000588193 334 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms