Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 RNU6-704P-201ENST00000364162 103 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 RNU4-84P-201ENST00000364200 139 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 RNU6-407P-201ENST00000365280 104 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 RNA5SP240-201ENST00000365355 128 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 RNU6-969P-201ENST00000383900 105 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 RNU6-546P-201ENST00000383991 107 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 MIR95-201ENST00000385072 81 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 MIR613-201ENST00000385248 95 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 Y_RNA.580-201ENST00000391004 95 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 HMGN2P18-201ENST00000450680 270 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 HSPE1P13-201ENST00000451143 297 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 EEF1B2P7-201ENST00000451177 676 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 AC117454.1-201ENST00000491120 168 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 AC023141.11-201ENST00000508864 202 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 AC010598.1-201ENST00000510378 103 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.51□□□□□ -2.01
CDKL5O76039 RNA5SP490-201ENST00000517141 136 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 AC025647.1-201ENST00000517879 253 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 AC022616.8-201ENST00000533569 253 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.51□□□□□ -2.01
CDKL5O76039 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.51□□□□□ -2.01
CDKL5O76039 MIR4744-201ENST00000581563 82 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 AC013412.1-201ENST00000610687 192 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 MIR5739-201ENST00000619803 80 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.51□□□□□ -2.01
CDKL5O76039 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDKL5O76039 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CDKL5O76039 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.5□□□□□ -2.01
CDKL5O76039 AL356292.1-201ENST00000283110 373 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 RNU6-818P-201ENST00000364837 108 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 RNU6-438P-201ENST00000365561 103 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 RNU6-301P-201ENST00000384277 107 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 RNU6-1235P-201ENST00000384559 107 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 MIR526A2-201ENST00000390198 65 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 RNU6-578P-201ENST00000390980 103 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 AL135786.1-201ENST00000415892 214 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.5□□□□□ -2.01
CDKL5O76039 AL161788.1-201ENST00000441805 169 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.5□□□□□ -2.01
CDKL5O76039 AC245047.8-201ENST00000456455 284 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 RNU7-26P-201ENST00000458980 63 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 RNU6-498P-201ENST00000459468 107 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 AC080013.2-201ENST00000460866 323 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 AC010531.2-201ENST00000465012 153 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 RNU6-948P-201ENST00000516374 107 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 RNU7-115P-201ENST00000516433 55 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 RNU6-63P-201ENST00000516690 95 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.5□□□□□ -2.01
CDKL5O76039 MIR4435-1-201ENST00000582552 80 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 MIR3117-201ENST00000584034 78 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 MIR548AY-201ENST00000617669 107 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 MIR6873-201ENST00000622788 63 ntBASIC2.5□□□□□ -2.01
CDKL5O76039 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDKL5O76039 RNU6-103P-201ENST00000363686 107 ntBASIC2.49□□□□□ -2.01
CDKL5O76039 RNU6-271P-201ENST00000363858 105 ntBASIC2.49□□□□□ -2.01
CDKL5O76039 RNA5SP126-201ENST00000365092 109 ntBASIC2.49□□□□□ -2.01
CDKL5O76039 MT-TT-201ENST00000387460 66 ntBASIC2.49□□□□□ -2.01
CDKL5O76039 SNORA11.4-201ENST00000408823 129 ntBASIC2.49□□□□□ -2.01
CDKL5O76039 RNU6-383P-201ENST00000410864 94 ntBASIC2.49□□□□□ -2.01
CDKL5O76039 HMGN2P38-201ENST00000423806 265 ntBASIC2.49□□□□□ -2.01
CDKL5O76039 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.49□□□□□ -2.01
CDKL5O76039 AC010409.1-201ENST00000487382 476 ntBASIC2.49□□□□□ -2.01
CDKL5O76039 AC090255.1-201ENST00000495779 349 ntBASIC2.49□□□□□ -2.01
CDKL5O76039 AC005840.1-201ENST00000498412 377 ntBASIC2.49□□□□□ -2.01
CDKL5O76039 RNA5SP20-201ENST00000515976 84 ntBASIC2.49□□□□□ -2.01
CDKL5O76039 RNU6-1007P-201ENST00000516586 107 ntBASIC2.49□□□□□ -2.01
CDKL5O76039 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.49□□□□□ -2.01
CDKL5O76039 MTND1P7-201ENST00000632801 297 ntBASIC2.49□□□□□ -2.01
CDKL5O76039 SNORD113-1-201ENST00000365321 69 ntBASIC2.48□□□□□ -2.01
CDKL5O76039 SNORD50.2-201ENST00000365465 70 ntBASIC2.48□□□□□ -2.01
CDKL5O76039 Y_RNA.357-201ENST00000365487 109 ntBASIC2.48□□□□□ -2.01
CDKL5O76039 RNU6-449P-201ENST00000383914 107 ntBASIC2.48□□□□□ -2.01
CDKL5O76039 RNU4-52P-201ENST00000384209 138 ntBASIC2.48□□□□□ -2.01
CDKL5O76039 RNU2-48P-201ENST00000410694 191 ntBASIC2.48□□□□□ -2.01
CDKL5O76039 EBAG9P1-201ENST00000418955 543 ntBASIC2.48□□□□□ -2.01
CDKL5O76039 AL606753.1-201ENST00000427435 87 ntBASIC2.48□□□□□ -2.01
CDKL5O76039 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.48□□□□□ -2.01
CDKL5O76039 CKS1BP2-201ENST00000497342 240 ntBASIC2.48□□□□□ -2.01
CDKL5O76039 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.48□□□□□ -2.01
CDKL5O76039 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.48□□□□□ -2.01
CDKL5O76039 AC109810.1-201ENST00000534066 224 ntBASIC2.48□□□□□ -2.01
CDKL5O76039 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.48□□□□□ -2.01
CDKL5O76039 AC009487.4-201ENST00000624969 3585 ntBASIC2.48□□□□□ -2.01
CDKL5O76039 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CDKL5O76039 MIR367-201ENST00000362299 68 ntBASIC2.47□□□□□ -2.01
CDKL5O76039 Y_RNA.229-201ENST00000364347 113 ntBASIC2.47□□□□□ -2.01
CDKL5O76039 MIR616-201ENST00000385293 97 ntBASIC2.47□□□□□ -2.01
CDKL5O76039 RNU6-220P-201ENST00000390919 107 ntBASIC2.47□□□□□ -2.01
CDKL5O76039 SNORA36B-201ENST00000410438 131 ntBASIC2.47□□□□□ -2.01
CDKL5O76039 MTCO1P44-201ENST00000441935 243 ntBASIC2.47□□□□□ -2.01
CDKL5O76039 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.47□□□□□ -2.01
CDKL5O76039 RNU6-991P-201ENST00000516168 107 ntBASIC2.47□□□□□ -2.01
CDKL5O76039 SNORD116-25-201ENST00000516517 92 ntBASIC2.47□□□□□ -2.01
CDKL5O76039 SNORA48.11-201ENST00000517015 89 ntBASIC2.47□□□□□ -2.01
CDKL5O76039 MIR4724-201ENST00000579485 89 ntBASIC2.47□□□□□ -2.01
CDKL5O76039 AP003357.1-201ENST00000604497 148 ntBASIC2.47□□□□□ -2.01
CDKL5O76039 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.47□□□□□ -2.01
CDKL5O76039 AC012640.5-201ENST00000623897 319 ntBASIC2.47□□□□□ -2.01
CDKL5O76039 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CDKL5O76039 SNORA38-201ENST00000363946 132 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms