Protein–RNA interactions for Protein: O75679

RFPL3, Ret finger protein-like 3, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3O75679 RNA5SP393-201ENST00000363423 117 ntBASIC2.57□□□□□ -2
RFPL3O75679 Y_RNA.304-201ENST00000365011 112 ntBASIC2.57□□□□□ -2
RFPL3O75679 SNORA8.3-201ENST00000384679 139 ntBASIC2.57□□□□□ -2
RFPL3O75679 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.57□□□□□ -2
RFPL3O75679 AC003982.1-202ENST00000469928 248 ntBASIC2.57□□□□□ -2
RFPL3O75679 RNU6-138P-201ENST00000515952 107 ntBASIC2.57□□□□□ -2
RFPL3O75679 RNU6-1291P-201ENST00000516591 104 ntBASIC2.57□□□□□ -2
RFPL3O75679 RNU7-128P-201ENST00000517247 62 ntBASIC2.57□□□□□ -2
RFPL3O75679 AC084364.2-201ENST00000546924 395 ntBASIC2.57□□□□□ -2
RFPL3O75679 AC127455.1-201ENST00000565496 145 ntBASIC2.57□□□□□ -2
RFPL3O75679 MIR4724-201ENST00000579485 89 ntBASIC2.57□□□□□ -2
RFPL3O75679 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.57□□□□□ -2
RFPL3O75679 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
RFPL3O75679 SNORD23.1-201ENST00000408212 104 ntBASIC2.56□□□□□ -2
RFPL3O75679 SNORA3.2-201ENST00000408221 125 ntBASIC2.56□□□□□ -2
RFPL3O75679 RNA5SP501-201ENST00000410990 112 ntBASIC2.56□□□□□ -2
RFPL3O75679 Y_RNA.793-201ENST00000411222 111 ntBASIC2.56□□□□□ -2
RFPL3O75679 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.56□□□□□ -2
RFPL3O75679 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.56□□□□□ -2
RFPL3O75679 HMGB3P3-201ENST00000510526 400 ntBASIC2.56□□□□□ -2
RFPL3O75679 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.56□□□□□ -2
RFPL3O75679 RNVU1-2-201ENST00000516326 135 ntBASIC2.56□□□□□ -2
RFPL3O75679 RNA5SP282-201ENST00000516355 108 ntBASIC2.56□□□□□ -2
RFPL3O75679 MIR4524B-201ENST00000581569 115 ntBASIC2.56□□□□□ -2
RFPL3O75679 AC022513.1-201ENST00000624512 117 ntBASIC2.56□□□□□ -2
RFPL3O75679 U6.108-201ENST00000637764 58 ntBASIC2.56□□□□□ -2
RFPL3O75679 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RFPL3O75679 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.55□□□□□ -2
RFPL3O75679 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
RFPL3O75679 MIR411-201ENST00000362239 96 ntBASIC2.55□□□□□ -2
RFPL3O75679 SNORA25.6-201ENST00000364121 118 ntBASIC2.55□□□□□ -2
RFPL3O75679 RNU6-923P-201ENST00000364753 107 ntBASIC2.55□□□□□ -2
RFPL3O75679 SNORA48.1-201ENST00000390879 135 ntBASIC2.55□□□□□ -2
RFPL3O75679 RNU6-437P-201ENST00000459408 95 ntBASIC2.55□□□□□ -2
RFPL3O75679 RNA5SP57-201ENST00000459463 123 ntBASIC2.55□□□□□ -2
RFPL3O75679 RNY3P16-201ENST00000516338 101 ntBASIC2.55□□□□□ -2
RFPL3O75679 RNU2-56P-201ENST00000516826 190 ntBASIC2.55□□□□□ -2
RFPL3O75679 RNU6-341P-201ENST00000516973 96 ntBASIC2.55□□□□□ -2
RFPL3O75679 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.55□□□□□ -2
RFPL3O75679 RNU4-10P-201ENST00000364383 140 ntBASIC2.54□□□□□ -2
RFPL3O75679 Y_RNA.274-201ENST00000364714 101 ntBASIC2.54□□□□□ -2
RFPL3O75679 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.54□□□□□ -2
RFPL3O75679 RNU6-493P-201ENST00000391321 108 ntBASIC2.54□□□□□ -2
RFPL3O75679 RNA5SP450-201ENST00000411206 102 ntBASIC2.54□□□□□ -2
RFPL3O75679 RPS26P45-201ENST00000471748 340 ntBASIC2.54□□□□□ -2
RFPL3O75679 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.54□□□□□ -2
RFPL3O75679 Z83818.1-201ENST00000603584 150 ntBASIC2.54□□□□□ -2
RFPL3O75679 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.54□□□□□ -2
RFPL3O75679 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.54□□□□□ -2
RFPL3O75679 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.54□□□□□ -2
RFPL3O75679 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
RFPL3O75679 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
RFPL3O75679 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.53□□□□□ -2
RFPL3O75679 Y_RNA.24-201ENST00000362508 103 ntBASIC2.53□□□□□ -2
RFPL3O75679 Y_RNA.29-201ENST00000362570 113 ntBASIC2.53□□□□□ -2
RFPL3O75679 RNU6-1020P-201ENST00000363684 107 ntBASIC2.53□□□□□ -2
RFPL3O75679 RNU4-41P-201ENST00000364426 143 ntBASIC2.53□□□□□ -2
RFPL3O75679 AC245047.3-201ENST00000429428 127 ntBASIC2.53□□□□□ -2
RFPL3O75679 SNORA31.15-201ENST00000516771 132 ntBASIC2.53□□□□□ -2
RFPL3O75679 Y_RNA.700-201ENST00000516806 100 ntBASIC2.53□□□□□ -2
RFPL3O75679 RNU6-182P-201ENST00000516970 105 ntBASIC2.53□□□□□ -2
RFPL3O75679 RNU2-19P-201ENST00000517288 84 ntBASIC2.53□□□□□ -2
RFPL3O75679 MIR4769-201ENST00000584126 77 ntBASIC2.53□□□□□ -2
RFPL3O75679 AC012640.5-201ENST00000623897 319 ntBASIC2.53□□□□□ -2
RFPL3O75679 AC010297.1-201ENST00000623948 149 ntBASIC2.53□□□□□ -2
RFPL3O75679 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.53□□□□□ -2
RFPL3O75679 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.53□□□□□ -2
RFPL3O75679 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RFPL3O75679 RNU6-1080P-201ENST00000383982 107 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 MIR520A-201ENST00000384862 85 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 RNA5SP109-201ENST00000391010 116 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 AL512604.1-201ENST00000404812 257 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 RNU4-53P-201ENST00000410828 140 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RFPL3O75679 MTND2P29-201ENST00000438595 412 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 AC023449.1-201ENST00000454464 154 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 Y_RNA.644-201ENST00000459006 113 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 snoU13.15-201ENST00000459407 104 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.52□□□□□ -2.01
RFPL3O75679 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.52□□□□□ -2.01
RFPL3O75679 Y_RNA.674-201ENST00000516362 113 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 SNORA81.3-201ENST00000517283 198 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 AC021269.2-201ENST00000532318 330 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.52□□□□□ -2.01
RFPL3O75679 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RFPL3O75679 MIR2681-201ENST00000581814 105 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 MIR3605-201ENST00000583214 100 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 AC091178.2-201ENST00000584401 117 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 AC011921.3-201ENST00000605540 361 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 U4.3-201ENST00000621047 82 ntBASIC2.52□□□□□ -2.01
RFPL3O75679 AC100821.1-201ENST00000523153 2479 ntBASIC2.51□□□□□ -2.01
RFPL3O75679 Y_RNA.203-201ENST00000364106 102 ntBASIC2.51□□□□□ -2.01
RFPL3O75679 RNU4-17P-201ENST00000365598 141 ntBASIC2.51□□□□□ -2.01
RFPL3O75679 RNA5SP425-201ENST00000410336 112 ntBASIC2.51□□□□□ -2.01
RFPL3O75679 RNU6-383P-201ENST00000410864 94 ntBASIC2.51□□□□□ -2.01
RFPL3O75679 Z98742.3-201ENST00000418637 326 ntBASIC2.51□□□□□ -2.01
RFPL3O75679 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.51□□□□□ -2.01
RFPL3O75679 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms