Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4□□□□□ -1.77
RNF40O75150 Y_RNA.95-201ENST00000363079 95 ntBASIC4□□□□□ -1.77
RNF40O75150 Y_RNA.267-201ENST00000364679 109 ntBASIC4□□□□□ -1.77
RNF40O75150 RNU6-283P-201ENST00000364788 107 ntBASIC4□□□□□ -1.77
RNF40O75150 RNU6-887P-201ENST00000410660 100 ntBASIC4□□□□□ -1.77
RNF40O75150 AC083863.1-201ENST00000438811 231 ntBASIC4□□□□□ -1.77
RNF40O75150 HMGN2P7-201ENST00000456186 273 ntBASIC4□□□□□ -1.77
RNF40O75150 AC110768.1-201ENST00000509222 400 ntBASIC4□□□□□ -1.77
RNF40O75150 PHBP14-201ENST00000512887 367 ntBASIC4□□□□□ -1.77
RNF40O75150 SNORA4.4-201ENST00000515921 135 ntBASIC4□□□□□ -1.77
RNF40O75150 Y_RNA.705-201ENST00000516862 110 ntBASIC4□□□□□ -1.77
RNF40O75150 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC4□□□□□ -1.77
RNF40O75150 MIR4668-201ENST00000582284 70 ntBASIC4□□□□□ -1.77
RNF40O75150 AC007179.3-201ENST00000604976 235 ntBASIC4□□□□□ -1.77
RNF40O75150 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
RNF40O75150 RNU6-525P-201ENST00000363685 104 ntBASIC3.99□□□□□ -1.77
RNF40O75150 SNORD45B-201ENST00000364617 72 ntBASIC3.99□□□□□ -1.77
RNF40O75150 Y_RNA.426-201ENST00000384068 113 ntBASIC3.99□□□□□ -1.77
RNF40O75150 RPL32P35-201ENST00000415214 394 ntBASIC3.99□□□□□ -1.77
RNF40O75150 AL139247.1-201ENST00000422768 325 ntBASIC3.99□□□□□ -1.77
RNF40O75150 AC009969.1-201ENST00000438726 172 ntBASIC3.99□□□□□ -1.77
RNF40O75150 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.99□□□□□ -1.77
RNF40O75150 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.99□□□□□ -1.77
RNF40O75150 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RNF40O75150 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF40O75150 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF40O75150 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF40O75150 SNORA18-201ENST00000384416 132 ntBASIC3.98□□□□□ -1.77
RNF40O75150 MIR802-201ENST00000390235 94 ntBASIC3.98□□□□□ -1.77
RNF40O75150 AL512326.2-201ENST00000426359 151 ntBASIC3.98□□□□□ -1.77
RNF40O75150 AC087499.4-201ENST00000448505 178 ntBASIC3.98□□□□□ -1.77
RNF40O75150 NDUFB9P3-201ENST00000521269 501 ntBASIC3.98□□□□□ -1.77
RNF40O75150 AC004812.1-201ENST00000540773 146 ntBASIC3.98□□□□□ -1.77
RNF40O75150 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF40O75150 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF40O75150 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
RNF40O75150 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF40O75150 RNU6-1083P-201ENST00000384022 107 ntBASIC3.97□□□□□ -1.77
RNF40O75150 RNU6-1201P-201ENST00000384227 107 ntBASIC3.97□□□□□ -1.77
RNF40O75150 RNA5SP467-201ENST00000391274 118 ntBASIC3.97□□□□□ -1.77
RNF40O75150 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF40O75150 SCARNA17.1-201ENST00000516211 143 ntBASIC3.97□□□□□ -1.77
RNF40O75150 SCARNA17.2-201ENST00000516334 143 ntBASIC3.97□□□□□ -1.77
RNF40O75150 SCARNA14-201ENST00000516903 136 ntBASIC3.97□□□□□ -1.77
RNF40O75150 SNORA18.7-201ENST00000516910 131 ntBASIC3.97□□□□□ -1.77
RNF40O75150 AP002004.2-201ENST00000531656 154 ntBASIC3.97□□□□□ -1.77
RNF40O75150 MIR4778-201ENST00000577635 80 ntBASIC3.97□□□□□ -1.77
RNF40O75150 SCARNA17.4-201ENST00000614296 143 ntBASIC3.97□□□□□ -1.77
RNF40O75150 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.97□□□□□ -1.77
RNF40O75150 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF40O75150 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF40O75150 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF40O75150 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.96□□□□□ -1.77
RNF40O75150 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF40O75150 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.96□□□□□ -1.78
RNF40O75150 SNORD14E-201ENST00000364009 85 ntBASIC3.96□□□□□ -1.78
RNF40O75150 Y_RNA.467-201ENST00000384297 102 ntBASIC3.96□□□□□ -1.78
RNF40O75150 AL627390.1-201ENST00000396055 340 ntBASIC3.96□□□□□ -1.78
RNF40O75150 RN7SKP200-201ENST00000410564 320 ntBASIC3.96□□□□□ -1.78
RNF40O75150 RPS29P4-201ENST00000414733 161 ntBASIC3.96□□□□□ -1.78
RNF40O75150 AL035423.1-201ENST00000420331 213 ntBASIC3.96□□□□□ -1.78
RNF40O75150 RPS12P18-201ENST00000442381 270 ntBASIC3.96□□□□□ -1.78
RNF40O75150 AL513534.2-201ENST00000603836 250 ntBASIC3.96□□□□□ -1.78
RNF40O75150 AL353149.1-201ENST00000610667 244 ntBASIC3.96□□□□□ -1.78
RNF40O75150 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
RNF40O75150 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF40O75150 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF40O75150 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.95□□□□□ -1.78
RNF40O75150 SNORD6-201ENST00000365444 73 ntBASIC3.95□□□□□ -1.78
RNF40O75150 SNORA9-201ENST00000384215 133 ntBASIC3.95□□□□□ -1.78
RNF40O75150 MIR34B-201ENST00000385076 84 ntBASIC3.95□□□□□ -1.78
RNF40O75150 MIR767-201ENST00000390228 109 ntBASIC3.95□□□□□ -1.78
RNF40O75150 RNU2-37P-201ENST00000410695 177 ntBASIC3.95□□□□□ -1.78
RNF40O75150 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RNF40O75150 SNRPGP3-201ENST00000469405 227 ntBASIC3.95□□□□□ -1.78
RNF40O75150 AC104619.4-201ENST00000510773 249 ntBASIC3.95□□□□□ -1.78
RNF40O75150 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF40O75150 MIR5047-201ENST00000579212 100 ntBASIC3.95□□□□□ -1.78
RNF40O75150 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.95□□□□□ -1.78
RNF40O75150 MIR338-201ENST00000636369 67 ntBASIC3.95□□□□□ -1.78
RNF40O75150 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RNF40O75150 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF40O75150 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF40O75150 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF40O75150 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RNF40O75150 SNORD38C-201ENST00000384381 69 ntBASIC3.94□□□□□ -1.78
RNF40O75150 MIR483-201ENST00000385070 76 ntBASIC3.94□□□□□ -1.78
RNF40O75150 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RNF40O75150 RNU2-40P-201ENST00000410833 196 ntBASIC3.94□□□□□ -1.78
RNF40O75150 AL049830.1-201ENST00000468034 425 ntBASIC3.94□□□□□ -1.78
RNF40O75150 U3.45-201ENST00000607547 219 ntBASIC3.94□□□□□ -1.78
RNF40O75150 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.94□□□□□ -1.78
RNF40O75150 AC012531.5-201ENST00000611375 151 ntBASIC3.94□□□□□ -1.78
RNF40O75150 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RNF40O75150 AL442644.1-201ENST00000454390 3105 ntBASIC3.94□□□□□ -1.78
RNF40O75150 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF40O75150 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF40O75150 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF40O75150 RNU6-546P-201ENST00000383991 107 ntBASIC3.93□□□□□ -1.78
RNF40O75150 MIR183-201ENST00000384958 110 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms