Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 RNU6-21P-201ENST00000384710 107 ntBASIC1.53□□□□□ -2.16
XRCC3O43542 SNORA12.1-201ENST00000390873 148 ntBASIC1.53□□□□□ -2.16
XRCC3O43542 RNU6-710P-201ENST00000410424 105 ntBASIC1.53□□□□□ -2.16
XRCC3O43542 RNA5SP511-201ENST00000410487 115 ntBASIC1.53□□□□□ -2.16
XRCC3O43542 AC004965.1-201ENST00000413033 213 ntBASIC1.53□□□□□ -2.16
XRCC3O43542 AL162725.1-201ENST00000435405 301 ntBASIC1.53□□□□□ -2.16
XRCC3O43542 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.53□□□□□ -2.16
XRCC3O43542 HMGB3P17-201ENST00000504195 649 ntBASIC1.53□□□□□ -2.16
XRCC3O43542 SEPT14P8-201ENST00000508026 178 ntBASIC1.53□□□□□ -2.16
XRCC3O43542 RNU6-397P-201ENST00000516226 104 ntBASIC1.53□□□□□ -2.16
XRCC3O43542 RNU6-1046P-201ENST00000516538 107 ntBASIC1.53□□□□□ -2.16
XRCC3O43542 AL358944.1-201ENST00000528537 144 ntBASIC1.53□□□□□ -2.16
XRCC3O43542 AP002004.2-201ENST00000531656 154 ntBASIC1.53□□□□□ -2.16
XRCC3O43542 AC015720.1-201ENST00000565251 277 ntBASIC1.53□□□□□ -2.16
XRCC3O43542 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.53□□□□□ -2.16
XRCC3O43542 MIR302D-201ENST00000362275 68 ntBASIC1.52□□□□□ -2.17
XRCC3O43542 RNU6-1123P-201ENST00000362347 106 ntBASIC1.52□□□□□ -2.17
XRCC3O43542 RNU6-136P-201ENST00000384663 107 ntBASIC1.52□□□□□ -2.17
XRCC3O43542 SNORD115-46-201ENST00000390982 71 ntBASIC1.52□□□□□ -2.17
XRCC3O43542 AL034345.1-201ENST00000407768 123 ntBASIC1.52□□□□□ -2.17
XRCC3O43542 RNU4-30P-201ENST00000410245 143 ntBASIC1.52□□□□□ -2.17
XRCC3O43542 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.52□□□□□ -2.17
XRCC3O43542 RNU7-28P-201ENST00000516759 62 ntBASIC1.52□□□□□ -2.17
XRCC3O43542 RNU6-1096P-201ENST00000517089 102 ntBASIC1.52□□□□□ -2.17
XRCC3O43542 CBX3P4-201ENST00000538909 354 ntBASIC1.52□□□□□ -2.17
XRCC3O43542 AC113195.1-201ENST00000579952 141 ntBASIC1.52□□□□□ -2.17
XRCC3O43542 SNORA28-201ENST00000606769 126 ntBASIC1.52□□□□□ -2.17
XRCC3O43542 SNORD113-5-201ENST00000607261 78 ntBASIC1.52□□□□□ -2.17
XRCC3O43542 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
XRCC3O43542 SNORA1B-201ENST00000362535 133 ntBASIC1.51□□□□□ -2.17
XRCC3O43542 Y_RNA.164-201ENST00000363709 102 ntBASIC1.51□□□□□ -2.17
XRCC3O43542 Y_RNA.172-201ENST00000363765 102 ntBASIC1.51□□□□□ -2.17
XRCC3O43542 Y_RNA.267-201ENST00000364679 109 ntBASIC1.51□□□□□ -2.17
XRCC3O43542 SNORD116-13-201ENST00000384408 92 ntBASIC1.51□□□□□ -2.17
XRCC3O43542 Y_RNA.527-201ENST00000384573 102 ntBASIC1.51□□□□□ -2.17
XRCC3O43542 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.51□□□□□ -2.17
XRCC3O43542 RPL31P63-201ENST00000422565 375 ntBASIC1.51□□□□□ -2.17
XRCC3O43542 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.51□□□□□ -2.17
XRCC3O43542 AC010655.3-201ENST00000478818 450 ntBASIC1.51□□□□□ -2.17
XRCC3O43542 RNU6-1291P-201ENST00000516591 104 ntBASIC1.51□□□□□ -2.17
XRCC3O43542 AC015688.6-201ENST00000577737 104 ntBASIC1.51□□□□□ -2.17
XRCC3O43542 MIR4300-201ENST00000581016 96 ntBASIC1.51□□□□□ -2.17
XRCC3O43542 AL355297.3-201ENST00000604082 446 ntBASIC1.51□□□□□ -2.17
XRCC3O43542 MIR376A1-201ENST00000616574 68 ntBASIC1.51□□□□□ -2.17
XRCC3O43542 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.51□□□□□ -2.17
XRCC3O43542 ICE2P2-201ENST00000483823 2787 ntBASIC1.51□□□□□ -2.17
XRCC3O43542 Y_RNA.222-201ENST00000364264 102 ntBASIC1.5□□□□□ -2.17
XRCC3O43542 Y_RNA.276-201ENST00000364732 109 ntBASIC1.5□□□□□ -2.17
XRCC3O43542 RNU1-78P-201ENST00000391248 165 ntBASIC1.5□□□□□ -2.17
XRCC3O43542 AC024067.1-201ENST00000426199 223 ntBASIC1.5□□□□□ -2.17
XRCC3O43542 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
XRCC3O43542 PGBD4P5-201ENST00000445958 426 ntBASIC1.5□□□□□ -2.17
XRCC3O43542 HSPE1P24-201ENST00000450782 238 ntBASIC1.5□□□□□ -2.17
XRCC3O43542 RNU2-56P-201ENST00000516826 190 ntBASIC1.5□□□□□ -2.17
XRCC3O43542 RNU6-1137P-201ENST00000517073 99 ntBASIC1.5□□□□□ -2.17
XRCC3O43542 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.5□□□□□ -2.17
XRCC3O43542 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.5□□□□□ -2.17
XRCC3O43542 DEFB117-201ENST00000602356 141 ntBASIC1.5□□□□□ -2.17
XRCC3O43542 AC004832.4-201ENST00000608952 331 ntBASIC1.5□□□□□ -2.17
XRCC3O43542 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
XRCC3O43542 Y_RNA.286-201ENST00000364813 102 ntBASIC1.49□□□□□ -2.17
XRCC3O43542 Y_RNA.368-201ENST00000365547 113 ntBASIC1.49□□□□□ -2.17
XRCC3O43542 RNU6-639P-201ENST00000384074 107 ntBASIC1.49□□□□□ -2.17
XRCC3O43542 RNA5SP482-201ENST00000391269 118 ntBASIC1.49□□□□□ -2.17
XRCC3O43542 STAG3L5P-204ENST00000443759 179 ntBASIC1.49□□□□□ -2.17
XRCC3O43542 RPS4XP11-201ENST00000446897 772 ntBASIC1.49□□□□□ -2.17
XRCC3O43542 RPS20P10-201ENST00000451209 253 ntBASIC1.49□□□□□ -2.17
XRCC3O43542 HMGN1P10-201ENST00000474557 553 ntBASIC1.49□□□□□ -2.17
XRCC3O43542 OR9P1P-201ENST00000496431 281 ntBASIC1.49□□□□□ -2.17
XRCC3O43542 RNU6-295P-201ENST00000516901 104 ntBASIC1.49□□□□□ -2.17
XRCC3O43542 MIR4285-201ENST00000581001 85 ntBASIC1.49□□□□□ -2.17
XRCC3O43542 AC005972.2-201ENST00000604690 348 ntBASIC1.49□□□□□ -2.17
XRCC3O43542 AC073349.3-201ENST00000617616 186 ntBASIC1.49□□□□□ -2.17
XRCC3O43542 AL513423.1-201ENST00000621695 132 ntBASIC1.49□□□□□ -2.17
XRCC3O43542 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.49□□□□□ -2.17
XRCC3O43542 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.48□□□□□ -2.17
XRCC3O43542 SNORD113-8-201ENST00000363497 74 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 RNU4-13P-201ENST00000364019 141 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 Y_RNA.214-201ENST00000364201 112 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 Y_RNA.265-201ENST00000364677 108 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 SNORD1A-201ENST00000364968 72 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 Y_RNA.310-201ENST00000365063 113 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 RNA5SP363-201ENST00000365072 115 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 Y_RNA.383-201ENST00000383855 97 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 Y_RNA.456-201ENST00000384232 111 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 MIR583-201ENST00000384846 75 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 AC019129.1-201ENST00000403786 261 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 RNU6-985P-201ENST00000410182 104 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 RNU6-855P-201ENST00000410395 104 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 ELOCP20-201ENST00000422460 345 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 AC233266.1-201ENST00000454518 96 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 RNU6-496P-201ENST00000516145 99 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 RNU6-764P-201ENST00000516396 105 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 AC131281.1-201ENST00000522984 164 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.48□□□□□ -2.17
XRCC3O43542 MIR4422-201ENST00000581938 83 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 AC242852.1-201ENST00000612151 96 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
XRCC3O43542 AC244015.1-201ENST00000622301 99 ntBASIC1.48□□□□□ -2.17
XRCC3O43542 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms