Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SH3D21A4FU49 RNU6-1164P-201ENST00000364428 107 ntBASIC2.77□□□□□ -1.97
SH3D21A4FU49 Y_RNA.309-201ENST00000365046 111 ntBASIC2.77□□□□□ -1.97
SH3D21A4FU49 SNORA7.4-201ENST00000384249 137 ntBASIC2.77□□□□□ -1.97
SH3D21A4FU49 RNU6-1235P-201ENST00000384559 107 ntBASIC2.77□□□□□ -1.97
SH3D21A4FU49 MIR627-201ENST00000384979 97 ntBASIC2.77□□□□□ -1.97
SH3D21A4FU49 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SH3D21A4FU49 SNORD67-201ENST00000390833 111 ntBASIC2.77□□□□□ -1.97
SH3D21A4FU49 RPL30P4-201ENST00000429309 333 ntBASIC2.77□□□□□ -1.97
SH3D21A4FU49 RPS4XP11-201ENST00000446897 772 ntBASIC2.77□□□□□ -1.97
SH3D21A4FU49 RNU6-498P-201ENST00000459468 107 ntBASIC2.77□□□□□ -1.97
SH3D21A4FU49 SCARNA17.1-201ENST00000516211 143 ntBASIC2.77□□□□□ -1.97
SH3D21A4FU49 SCARNA17.2-201ENST00000516334 143 ntBASIC2.77□□□□□ -1.97
SH3D21A4FU49 RNU6-586P-201ENST00000517265 104 ntBASIC2.77□□□□□ -1.97
SH3D21A4FU49 UBL5P2-201ENST00000583788 219 ntBASIC2.77□□□□□ -1.97
SH3D21A4FU49 SCARNA17.4-201ENST00000614296 143 ntBASIC2.77□□□□□ -1.97
SH3D21A4FU49 Pinc.1-201ENST00000616452 154 ntBASIC2.77□□□□□ -1.97
SH3D21A4FU49 MIR6852-201ENST00000621699 66 ntBASIC2.77□□□□□ -1.97
SH3D21A4FU49 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.77□□□□□ -1.97
SH3D21A4FU49 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.77□□□□□ -1.97
SH3D21A4FU49 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SH3D21A4FU49 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SH3D21A4FU49 RNU6-486P-201ENST00000363116 107 ntBASIC2.76□□□□□ -1.97
SH3D21A4FU49 RNU6-1209P-201ENST00000363655 107 ntBASIC2.76□□□□□ -1.97
SH3D21A4FU49 Y_RNA.796-201ENST00000364268 102 ntBASIC2.76□□□□□ -1.97
SH3D21A4FU49 Y_RNA.799-201ENST00000364992 102 ntBASIC2.76□□□□□ -1.97
SH3D21A4FU49 Y_RNA.500-201ENST00000384466 111 ntBASIC2.76□□□□□ -1.97
SH3D21A4FU49 SNORA44-201ENST00000384584 132 ntBASIC2.76□□□□□ -1.97
SH3D21A4FU49 MIR181B1-201ENST00000385240 110 ntBASIC2.76□□□□□ -1.97
SH3D21A4FU49 SNORA26-201ENST00000391286 122 ntBASIC2.76□□□□□ -1.97
SH3D21A4FU49 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.76□□□□□ -1.97
SH3D21A4FU49 AC245102.2-201ENST00000448956 180 ntBASIC2.76□□□□□ -1.97
SH3D21A4FU49 SNORD11-201ENST00000459124 84 ntBASIC2.76□□□□□ -1.97
SH3D21A4FU49 AC008885.1-201ENST00000514930 301 ntBASIC2.76□□□□□ -1.97
SH3D21A4FU49 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.76□□□□□ -1.97
SH3D21A4FU49 SNORA72.7-201ENST00000516349 94 ntBASIC2.76□□□□□ -1.97
SH3D21A4FU49 NDUFA5P6-201ENST00000542110 379 ntBASIC2.76□□□□□ -1.97
SH3D21A4FU49 MIR4438-201ENST00000585271 93 ntBASIC2.76□□□□□ -1.97
SH3D21A4FU49 AC097639.2-201ENST00000603159 172 ntBASIC2.76□□□□□ -1.97
SH3D21A4FU49 MIR7106-201ENST00000612419 65 ntBASIC2.76□□□□□ -1.97
SH3D21A4FU49 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
SH3D21A4FU49 Y_RNA.52-201ENST00000362760 96 ntBASIC2.75□□□□□ -1.97
SH3D21A4FU49 RNU1-22P-201ENST00000363334 158 ntBASIC2.75□□□□□ -1.97
SH3D21A4FU49 Y_RNA.617-201ENST00000410920 90 ntBASIC2.75□□□□□ -1.97
SH3D21A4FU49 RPS29P6-201ENST00000438196 145 ntBASIC2.75□□□□□ -1.97
SH3D21A4FU49 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.75□□□□□ -1.97
SH3D21A4FU49 Y_RNA.649-201ENST00000459077 103 ntBASIC2.75□□□□□ -1.97
SH3D21A4FU49 Y_RNA.651-201ENST00000459380 103 ntBASIC2.75□□□□□ -1.97
SH3D21A4FU49 AC097462.1-201ENST00000514125 324 ntBASIC2.75□□□□□ -1.97
SH3D21A4FU49 RN7SKP19-201ENST00000516016 252 ntBASIC2.75□□□□□ -1.97
SH3D21A4FU49 RNU7-149P-201ENST00000516739 59 ntBASIC2.75□□□□□ -1.97
SH3D21A4FU49 RNU6-826P-201ENST00000516827 104 ntBASIC2.75□□□□□ -1.97
SH3D21A4FU49 RNU7-172P-201ENST00000517125 64 ntBASIC2.75□□□□□ -1.97
SH3D21A4FU49 RNU1-104P-201ENST00000517280 175 ntBASIC2.75□□□□□ -1.97
SH3D21A4FU49 AC011604.1-201ENST00000545978 196 ntBASIC2.75□□□□□ -1.97
SH3D21A4FU49 MIR4513-201ENST00000581077 86 ntBASIC2.75□□□□□ -1.97
SH3D21A4FU49 AC091178.2-201ENST00000584401 117 ntBASIC2.75□□□□□ -1.97
SH3D21A4FU49 RPL12P50-201ENST00000603116 116 ntBASIC2.75□□□□□ -1.97
SH3D21A4FU49 AC025166.1-201ENST00000612411 163 ntBASIC2.75□□□□□ -1.97
SH3D21A4FU49 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.75□□□□□ -1.97
SH3D21A4FU49 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SH3D21A4FU49 AL137790.1-201ENST00000634283 177 ntBASIC2.75□□□□□ -1.97
SH3D21A4FU49 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.75□□□□□ -1.97
SH3D21A4FU49 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SH3D21A4FU49 SNORA80A-201ENST00000363922 136 ntBASIC2.74□□□□□ -1.97
SH3D21A4FU49 RNU6-461P-201ENST00000364195 107 ntBASIC2.74□□□□□ -1.97
SH3D21A4FU49 SNORA71.1-201ENST00000364523 117 ntBASIC2.74□□□□□ -1.97
SH3D21A4FU49 SNORA68.1-201ENST00000364537 132 ntBASIC2.74□□□□□ -1.97
SH3D21A4FU49 RNU6-1083P-201ENST00000384022 107 ntBASIC2.74□□□□□ -1.97
SH3D21A4FU49 Y_RNA.510-201ENST00000384511 114 ntBASIC2.74□□□□□ -1.97
SH3D21A4FU49 SNORD15B-201ENST00000384714 146 ntBASIC2.74□□□□□ -1.97
SH3D21A4FU49 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SH3D21A4FU49 AL590004.2-201ENST00000404787 371 ntBASIC2.74□□□□□ -1.97
SH3D21A4FU49 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.74□□□□□ -1.97
SH3D21A4FU49 AC022018.1-201ENST00000430685 241 ntBASIC2.74□□□□□ -1.97
SH3D21A4FU49 AC025750.2-201ENST00000442609 450 ntBASIC2.74□□□□□ -1.97
SH3D21A4FU49 RPS29P21-201ENST00000496272 170 ntBASIC2.74□□□□□ -1.97
SH3D21A4FU49 RPPH1-2P-201ENST00000516688 293 ntBASIC2.74□□□□□ -1.97
SH3D21A4FU49 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.74□□□□□ -1.97
SH3D21A4FU49 AL022345.2-201ENST00000606307 135 ntBASIC2.74□□□□□ -1.97
SH3D21A4FU49 JPX_2.1-201ENST00000614161 69 ntBASIC2.74□□□□□ -1.97
SH3D21A4FU49 MIR1248-201ENST00000629190 106 ntBASIC2.74□□□□□ -1.97
SH3D21A4FU49 MIR622-201ENST00000638396 96 ntBASIC2.74□□□□□ -1.97
SH3D21A4FU49 AC009487.4-201ENST00000624969 3585 ntBASIC2.74□□□□□ -1.97
SH3D21A4FU49 AL136360.1-201ENST00000503377 1900 ntBASIC2.74□□□□□ -1.97
SH3D21A4FU49 MIR450A1-201ENST00000362262 91 ntBASIC2.73□□□□□ -1.97
SH3D21A4FU49 RNU1-72P-201ENST00000362976 153 ntBASIC2.73□□□□□ -1.97
SH3D21A4FU49 RNU6-743P-201ENST00000364151 106 ntBASIC2.73□□□□□ -1.97
SH3D21A4FU49 Y_RNA.346-201ENST00000365385 112 ntBASIC2.73□□□□□ -1.97
SH3D21A4FU49 Y_RNA.486-201ENST00000384398 107 ntBASIC2.73□□□□□ -1.97
SH3D21A4FU49 RNU6-880P-201ENST00000384526 107 ntBASIC2.73□□□□□ -1.97
SH3D21A4FU49 RNA5SP127-201ENST00000411051 133 ntBASIC2.73□□□□□ -1.97
SH3D21A4FU49 Y_RNA.621-201ENST00000411065 96 ntBASIC2.73□□□□□ -1.97
SH3D21A4FU49 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.73□□□□□ -1.97
SH3D21A4FU49 AC092427.1-202ENST00000430569 476 ntBASIC2.73□□□□□ -1.97
SH3D21A4FU49 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.73□□□□□ -1.97
SH3D21A4FU49 HMGN2P18-201ENST00000450680 270 ntBASIC2.73□□□□□ -1.97
SH3D21A4FU49 UBE2DNL-203ENST00000474922 222 ntBASIC2.73□□□□□ -1.97
SH3D21A4FU49 OR9P1P-201ENST00000496431 281 ntBASIC2.73□□□□□ -1.97
SH3D21A4FU49 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms