Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
PCDHGB3Q9Y5G1 RNU2-56P-201ENST00000516826 190 ntBASIC1.87□□□□□ -2.11
PCDHGB3Q9Y5G1 AC055872.1-201ENST00000570978 278 ntBASIC1.87□□□□□ -2.11
PCDHGB3Q9Y5G1 MIR4524B-201ENST00000581569 115 ntBASIC1.87□□□□□ -2.11
PCDHGB3Q9Y5G1 AL929325.1-201ENST00000603096 117 ntBASIC1.87□□□□□ -2.11
PCDHGB3Q9Y5G1 AC016925.2-201ENST00000605108 242 ntBASIC1.87□□□□□ -2.11
PCDHGB3Q9Y5G1 AC011373.1-201ENST00000607270 237 ntBASIC1.87□□□□□ -2.11
PCDHGB3Q9Y5G1 AL513423.1-201ENST00000621695 132 ntBASIC1.87□□□□□ -2.11
PCDHGB3Q9Y5G1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.87□□□□□ -2.11
PCDHGB3Q9Y5G1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PCDHGB3Q9Y5G1 AC091812.1-201ENST00000432235 1948 ntBASIC1.87□□□□□ -2.11
PCDHGB3Q9Y5G1 Y_RNA.124-201ENST00000363339 93 ntBASIC1.86□□□□□ -2.11
PCDHGB3Q9Y5G1 RNU6-101P-201ENST00000410323 104 ntBASIC1.86□□□□□ -2.11
PCDHGB3Q9Y5G1 MTND1P14-201ENST00000427400 950 ntBASIC1.86□□□□□ -2.11
PCDHGB3Q9Y5G1 HSPE1P21-201ENST00000438283 308 ntBASIC1.86□□□□□ -2.11
PCDHGB3Q9Y5G1 AL606517.2-201ENST00000442855 241 ntBASIC1.86□□□□□ -2.11
PCDHGB3Q9Y5G1 HSPE1P24-201ENST00000450782 238 ntBASIC1.86□□□□□ -2.11
PCDHGB3Q9Y5G1 MIR4285-201ENST00000581001 85 ntBASIC1.86□□□□□ -2.11
PCDHGB3Q9Y5G1 AC091178.2-201ENST00000584401 117 ntBASIC1.86□□□□□ -2.11
PCDHGB3Q9Y5G1 AC124312.5-201ENST00000604451 268 ntBASIC1.86□□□□□ -2.11
PCDHGB3Q9Y5G1 Y_RNA.331-201ENST00000365267 102 ntBASIC1.85□□□□□ -2.11
PCDHGB3Q9Y5G1 Y_RNA.485-201ENST00000384395 102 ntBASIC1.85□□□□□ -2.11
PCDHGB3Q9Y5G1 RNU6-21P-201ENST00000384710 107 ntBASIC1.85□□□□□ -2.11
PCDHGB3Q9Y5G1 RNU6-308P-201ENST00000390957 107 ntBASIC1.85□□□□□ -2.11
PCDHGB3Q9Y5G1 AL023284.1-201ENST00000403956 276 ntBASIC1.85□□□□□ -2.11
PCDHGB3Q9Y5G1 RNU2-61P-201ENST00000411069 191 ntBASIC1.85□□□□□ -2.11
PCDHGB3Q9Y5G1 SNORA31.10-201ENST00000516482 106 ntBASIC1.85□□□□□ -2.11
PCDHGB3Q9Y5G1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.85□□□□□ -2.11
PCDHGB3Q9Y5G1 AC015688.6-201ENST00000577737 104 ntBASIC1.85□□□□□ -2.11
PCDHGB3Q9Y5G1 AC040896.1-201ENST00000613819 479 ntBASIC1.85□□□□□ -2.11
PCDHGB3Q9Y5G1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PCDHGB3Q9Y5G1 MIR302D-201ENST00000362275 68 ntBASIC1.84□□□□□ -2.11
PCDHGB3Q9Y5G1 Y_RNA.148-201ENST00000363557 117 ntBASIC1.84□□□□□ -2.11
PCDHGB3Q9Y5G1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.84□□□□□ -2.11
PCDHGB3Q9Y5G1 RNA5SP482-201ENST00000391269 118 ntBASIC1.84□□□□□ -2.11
PCDHGB3Q9Y5G1 SNORA26.9-201ENST00000391322 122 ntBASIC1.84□□□□□ -2.11
PCDHGB3Q9Y5G1 MIR1289-2-201ENST00000408360 111 ntBASIC1.84□□□□□ -2.11
PCDHGB3Q9Y5G1 AL445685.2-201ENST00000422551 342 ntBASIC1.84□□□□□ -2.11
PCDHGB3Q9Y5G1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.84□□□□□ -2.11
PCDHGB3Q9Y5G1 AC091021.1-201ENST00000468051 388 ntBASIC1.84□□□□□ -2.11
PCDHGB3Q9Y5G1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.84□□□□□ -2.11
PCDHGB3Q9Y5G1 RNA5SP445-201ENST00000515889 115 ntBASIC1.84□□□□□ -2.11
PCDHGB3Q9Y5G1 RNU7-110P-201ENST00000516891 62 ntBASIC1.84□□□□□ -2.11
PCDHGB3Q9Y5G1 MIR3122-201ENST00000577243 73 ntBASIC1.84□□□□□ -2.11
PCDHGB3Q9Y5G1 MIR5089-201ENST00000580047 84 ntBASIC1.84□□□□□ -2.11
PCDHGB3Q9Y5G1 Y_RNA.783-201ENST00000613546 102 ntBASIC1.84□□□□□ -2.11
PCDHGB3Q9Y5G1 AC073349.3-201ENST00000617616 186 ntBASIC1.84□□□□□ -2.11
PCDHGB3Q9Y5G1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
PCDHGB3Q9Y5G1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
PCDHGB3Q9Y5G1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.84□□□□□ -2.12
PCDHGB3Q9Y5G1 Y_RNA.31-201ENST00000362574 102 ntBASIC1.83□□□□□ -2.12
PCDHGB3Q9Y5G1 RNU4-13P-201ENST00000364019 141 ntBASIC1.83□□□□□ -2.12
PCDHGB3Q9Y5G1 Y_RNA.265-201ENST00000364677 108 ntBASIC1.83□□□□□ -2.12
PCDHGB3Q9Y5G1 RNU6-474P-201ENST00000384243 107 ntBASIC1.83□□□□□ -2.12
PCDHGB3Q9Y5G1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.83□□□□□ -2.12
PCDHGB3Q9Y5G1 U8.13-201ENST00000390842 128 ntBASIC1.83□□□□□ -2.12
PCDHGB3Q9Y5G1 RNU2-2P-201ENST00000410396 191 ntBASIC1.83□□□□□ -2.12
PCDHGB3Q9Y5G1 AL354751.2-201ENST00000415471 210 ntBASIC1.83□□□□□ -2.12
PCDHGB3Q9Y5G1 AC079140.2-201ENST00000506193 142 ntBASIC1.83□□□□□ -2.12
PCDHGB3Q9Y5G1 RNU6-1337P-201ENST00000516525 95 ntBASIC1.83□□□□□ -2.12
PCDHGB3Q9Y5G1 AC015712.3-201ENST00000559380 164 ntBASIC1.83□□□□□ -2.12
PCDHGB3Q9Y5G1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.83□□□□□ -2.12
PCDHGB3Q9Y5G1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.83□□□□□ -2.12
PCDHGB3Q9Y5G1 AC021506.2-201ENST00000612354 169 ntBASIC1.83□□□□□ -2.12
PCDHGB3Q9Y5G1 MIR8063-201ENST00000621930 81 ntBASIC1.83□□□□□ -2.12
PCDHGB3Q9Y5G1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.83□□□□□ -2.12
PCDHGB3Q9Y5G1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.82□□□□□ -2.12
PCDHGB3Q9Y5G1 Y_RNA.267-201ENST00000364679 109 ntBASIC1.82□□□□□ -2.12
PCDHGB3Q9Y5G1 Y_RNA.380-201ENST00000365663 111 ntBASIC1.82□□□□□ -2.12
PCDHGB3Q9Y5G1 RNU6-482P-201ENST00000391068 107 ntBASIC1.82□□□□□ -2.12
PCDHGB3Q9Y5G1 RNU2-20P-201ENST00000410425 191 ntBASIC1.82□□□□□ -2.12
PCDHGB3Q9Y5G1 RNU6-1199P-201ENST00000411249 104 ntBASIC1.82□□□□□ -2.12
PCDHGB3Q9Y5G1 AL139156.1-201ENST00000412785 841 ntBASIC1.82□□□□□ -2.12
PCDHGB3Q9Y5G1 AL591806.2-201ENST00000433122 173 ntBASIC1.82□□□□□ -2.12
PCDHGB3Q9Y5G1 AL162725.1-201ENST00000435405 301 ntBASIC1.82□□□□□ -2.12
PCDHGB3Q9Y5G1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.82□□□□□ -2.12
PCDHGB3Q9Y5G1 AC005908.1-201ENST00000468701 347 ntBASIC1.82□□□□□ -2.12
PCDHGB3Q9Y5G1 AC099513.1-201ENST00000490423 301 ntBASIC1.82□□□□□ -2.12
PCDHGB3Q9Y5G1 RNU6-436P-201ENST00000516171 114 ntBASIC1.82□□□□□ -2.12
PCDHGB3Q9Y5G1 Y_RNA.711-201ENST00000516993 102 ntBASIC1.82□□□□□ -2.12
PCDHGB3Q9Y5G1 Y_RNA.715-201ENST00000517082 110 ntBASIC1.82□□□□□ -2.12
PCDHGB3Q9Y5G1 RNU6-1096P-201ENST00000517089 102 ntBASIC1.82□□□□□ -2.12
PCDHGB3Q9Y5G1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
PCDHGB3Q9Y5G1 SNORD1A-201ENST00000364968 72 ntBASIC1.81□□□□□ -2.12
PCDHGB3Q9Y5G1 Y_RNA.389-201ENST00000383924 113 ntBASIC1.81□□□□□ -2.12
PCDHGB3Q9Y5G1 RNU6-203P-201ENST00000384038 104 ntBASIC1.81□□□□□ -2.12
PCDHGB3Q9Y5G1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.81□□□□□ -2.12
PCDHGB3Q9Y5G1 STAG3L5P-204ENST00000443759 179 ntBASIC1.81□□□□□ -2.12
PCDHGB3Q9Y5G1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.81□□□□□ -2.12
PCDHGB3Q9Y5G1 RNU6-970P-201ENST00000516312 107 ntBASIC1.81□□□□□ -2.12
PCDHGB3Q9Y5G1 AC044792.1-201ENST00000593294 196 ntBASIC1.81□□□□□ -2.12
PCDHGB3Q9Y5G1 SNORD113-5-201ENST00000607261 78 ntBASIC1.81□□□□□ -2.12
PCDHGB3Q9Y5G1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.81□□□□□ -2.12
PCDHGB3Q9Y5G1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.81□□□□□ -2.12
PCDHGB3Q9Y5G1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.81□□□□□ -2.12
PCDHGB3Q9Y5G1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
PCDHGB3Q9Y5G1 Y_RNA.202-201ENST00000364083 110 ntBASIC1.8□□□□□ -2.12
PCDHGB3Q9Y5G1 MIR513A1-201ENST00000385138 129 ntBASIC1.8□□□□□ -2.12
PCDHGB3Q9Y5G1 RNU6-1248P-201ENST00000391096 64 ntBASIC1.8□□□□□ -2.12
PCDHGB3Q9Y5G1 MIR1252-201ENST00000408861 65 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms