Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 AC027419.1-201ENST00000522976 328 ntBASIC2.83□□□□□ -1.96
SIT1Q9Y3P8 MIR378D2-201ENST00000580636 98 ntBASIC2.83□□□□□ -1.96
SIT1Q9Y3P8 MIR2681-201ENST00000581814 105 ntBASIC2.83□□□□□ -1.96
SIT1Q9Y3P8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.83□□□□□ -1.96
SIT1Q9Y3P8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SIT1Q9Y3P8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SIT1Q9Y3P8 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SIT1Q9Y3P8 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.82□□□□□ -1.96
SIT1Q9Y3P8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SIT1Q9Y3P8 MIR181A2-201ENST00000384863 110 ntBASIC2.82□□□□□ -1.96
SIT1Q9Y3P8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.82□□□□□ -1.96
SIT1Q9Y3P8 SCARNA20.6-201ENST00000517251 106 ntBASIC2.82□□□□□ -1.96
SIT1Q9Y3P8 NDUFA5P6-201ENST00000542110 379 ntBASIC2.82□□□□□ -1.96
SIT1Q9Y3P8 MIR4438-201ENST00000585271 93 ntBASIC2.82□□□□□ -1.96
SIT1Q9Y3P8 U2.20-201ENST00000613956 192 ntBASIC2.82□□□□□ -1.96
SIT1Q9Y3P8 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.82□□□□□ -1.96
SIT1Q9Y3P8 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SIT1Q9Y3P8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.82□□□□□ -1.96
SIT1Q9Y3P8 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SIT1Q9Y3P8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
SIT1Q9Y3P8 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.82□□□□□ -1.96
SIT1Q9Y3P8 ZNF658B-202ENST00000615961 3375 ntBASIC2.81□□□□□ -1.96
SIT1Q9Y3P8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SIT1Q9Y3P8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.81□□□□□ -1.96
SIT1Q9Y3P8 RNU1-23P-201ENST00000363361 144 ntBASIC2.81□□□□□ -1.96
SIT1Q9Y3P8 Y_RNA.203-201ENST00000364106 102 ntBASIC2.81□□□□□ -1.96
SIT1Q9Y3P8 DYNLT3P1-201ENST00000378574 347 ntBASIC2.81□□□□□ -1.96
SIT1Q9Y3P8 SNORA20-201ENST00000384662 132 ntBASIC2.81□□□□□ -1.96
SIT1Q9Y3P8 Y_RNA.587-201ENST00000391210 103 ntBASIC2.81□□□□□ -1.96
SIT1Q9Y3P8 SNORA3.2-201ENST00000408221 125 ntBASIC2.81□□□□□ -1.96
SIT1Q9Y3P8 RPS29P12-201ENST00000460178 152 ntBASIC2.81□□□□□ -1.96
SIT1Q9Y3P8 AC023141.11-201ENST00000508864 202 ntBASIC2.81□□□□□ -1.96
SIT1Q9Y3P8 SNORA4.4-201ENST00000515921 135 ntBASIC2.81□□□□□ -1.96
SIT1Q9Y3P8 RNA5SP153-201ENST00000516498 76 ntBASIC2.81□□□□□ -1.96
SIT1Q9Y3P8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.81□□□□□ -1.96
SIT1Q9Y3P8 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SIT1Q9Y3P8 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SIT1Q9Y3P8 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SIT1Q9Y3P8 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 MIR340-201ENST00000362125 95 ntBASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 RNU1-96P-201ENST00000364163 162 ntBASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 RNU6-978P-201ENST00000364371 103 ntBASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 Y_RNA.261-201ENST00000364631 102 ntBASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 Y_RNA.432-201ENST00000384087 111 ntBASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 Y_RNA.622-201ENST00000411091 108 ntBASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 AC245047.4-201ENST00000433189 144 ntBASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 RPS4XP11-201ENST00000446897 772 ntBASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 SNORD77.4-201ENST00000516158 81 ntBASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 RNU6-1333P-201ENST00000516162 93 ntBASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 RNU7-172P-201ENST00000517125 64 ntBASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 AC093331.1-201ENST00000521474 169 ntBASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 AL929325.1-201ENST00000603096 117 ntBASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 AC097639.2-201ENST00000603159 172 ntBASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 U6.73-201ENST00000619194 103 ntBASIC2.8□□□□□ -1.96
SIT1Q9Y3P8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SIT1Q9Y3P8 MAPK10-362ENST00000641864 4484 ntBASIC2.79□□□□□ -1.96
SIT1Q9Y3P8 MIR592-201ENST00000384959 97 ntBASIC2.79□□□□□ -1.96
SIT1Q9Y3P8 RNU6-588P-201ENST00000410281 105 ntBASIC2.79□□□□□ -1.96
SIT1Q9Y3P8 RNU6-1211P-201ENST00000459179 105 ntBASIC2.79□□□□□ -1.96
SIT1Q9Y3P8 RN7SL633P-201ENST00000488974 297 ntBASIC2.79□□□□□ -1.96
SIT1Q9Y3P8 RNU6-1299P-201ENST00000516316 100 ntBASIC2.79□□□□□ -1.96
SIT1Q9Y3P8 RNU6-126P-201ENST00000516685 103 ntBASIC2.79□□□□□ -1.96
SIT1Q9Y3P8 AP001328.1-201ENST00000528550 176 ntBASIC2.79□□□□□ -1.96
SIT1Q9Y3P8 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.79□□□□□ -1.96
SIT1Q9Y3P8 AC120024.3-201ENST00000603167 156 ntBASIC2.79□□□□□ -1.96
SIT1Q9Y3P8 U7.2-201ENST00000607576 63 ntBASIC2.79□□□□□ -1.96
SIT1Q9Y3P8 uc_338.4-201ENST00000616635 176 ntBASIC2.79□□□□□ -1.96
SIT1Q9Y3P8 AC110774.1-201ENST00000623567 2018 ntBASIC2.79□□□□□ -1.96
SIT1Q9Y3P8 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.79□□□□□ -1.96
SIT1Q9Y3P8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SIT1Q9Y3P8 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
SIT1Q9Y3P8 RNU6-834P-201ENST00000362367 110 ntBASIC2.78□□□□□ -1.96
SIT1Q9Y3P8 RNU6-1180P-201ENST00000364935 107 ntBASIC2.78□□□□□ -1.96
SIT1Q9Y3P8 Y_RNA.353-201ENST00000365440 108 ntBASIC2.78□□□□□ -1.96
SIT1Q9Y3P8 Y_RNA.563-201ENST00000384707 108 ntBASIC2.78□□□□□ -1.96
SIT1Q9Y3P8 RNU6-460P-201ENST00000391158 108 ntBASIC2.78□□□□□ -1.96
SIT1Q9Y3P8 RNU2-63P-201ENST00000410792 194 ntBASIC2.78□□□□□ -1.96
SIT1Q9Y3P8 RN7SKP192-201ENST00000411291 327 ntBASIC2.78□□□□□ -1.96
SIT1Q9Y3P8 SNORD11-201ENST00000459124 84 ntBASIC2.78□□□□□ -1.96
SIT1Q9Y3P8 CKS1BP2-201ENST00000497342 240 ntBASIC2.78□□□□□ -1.96
SIT1Q9Y3P8 RNU6-1146P-201ENST00000516282 102 ntBASIC2.78□□□□□ -1.96
SIT1Q9Y3P8 MIR3117-201ENST00000584034 78 ntBASIC2.78□□□□□ -1.96
SIT1Q9Y3P8 MIR3616-201ENST00000584070 92 ntBASIC2.78□□□□□ -1.96
SIT1Q9Y3P8 CTSLP2-204ENST00000629029 392 ntBASIC2.78□□□□□ -1.96
SIT1Q9Y3P8 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SIT1Q9Y3P8 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.97
SIT1Q9Y3P8 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
SIT1Q9Y3P8 Y_RNA.796-201ENST00000364268 102 ntBASIC2.77□□□□□ -1.97
SIT1Q9Y3P8 RNU6-1082P-201ENST00000364574 107 ntBASIC2.77□□□□□ -1.97
SIT1Q9Y3P8 Y_RNA.799-201ENST00000364992 102 ntBASIC2.77□□□□□ -1.97
SIT1Q9Y3P8 MIR561-201ENST00000385216 97 ntBASIC2.77□□□□□ -1.97
SIT1Q9Y3P8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SIT1Q9Y3P8 AC023449.1-201ENST00000454464 154 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms