Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 SNORA22-201ENST00000383907 134 ntBASIC3.58□□□□□ -1.84
NOD1Q9Y239 SNORA12.1-201ENST00000390873 148 ntBASIC3.58□□□□□ -1.84
NOD1Q9Y239 MIR1289-1-201ENST00000408836 144 ntBASIC3.58□□□□□ -1.84
NOD1Q9Y239 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.58□□□□□ -1.84
NOD1Q9Y239 SNRPGP10-201ENST00000432323 225 ntBASIC3.58□□□□□ -1.84
NOD1Q9Y239 MRPS17P9-201ENST00000511924 393 ntBASIC3.58□□□□□ -1.84
NOD1Q9Y239 NDUFA5P6-201ENST00000542110 379 ntBASIC3.58□□□□□ -1.84
NOD1Q9Y239 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.58□□□□□ -1.84
NOD1Q9Y239 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.58□□□□□ -1.84
NOD1Q9Y239 AL359075.3-201ENST00000613288 217 ntBASIC3.58□□□□□ -1.84
NOD1Q9Y239 AL021368.2-201ENST00000606125 5352 ntBASIC3.58□□□□□ -1.84
NOD1Q9Y239 Y_RNA.253-201ENST00000364562 112 ntBASIC3.57□□□□□ -1.84
NOD1Q9Y239 SNORD58C-201ENST00000365223 64 ntBASIC3.57□□□□□ -1.84
NOD1Q9Y239 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
NOD1Q9Y239 RNU6-220P-201ENST00000390919 107 ntBASIC3.57□□□□□ -1.84
NOD1Q9Y239 MIR891A-201ENST00000401237 79 ntBASIC3.57□□□□□ -1.84
NOD1Q9Y239 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NOD1Q9Y239 EDDM3CP-201ENST00000415977 425 ntBASIC3.57□□□□□ -1.84
NOD1Q9Y239 AC022018.1-201ENST00000430685 241 ntBASIC3.57□□□□□ -1.84
NOD1Q9Y239 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.57□□□□□ -1.84
NOD1Q9Y239 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
NOD1Q9Y239 RPS26P45-201ENST00000471748 340 ntBASIC3.57□□□□□ -1.84
NOD1Q9Y239 MIR3129-201ENST00000581095 76 ntBASIC3.57□□□□□ -1.84
NOD1Q9Y239 RNVU1-4-201ENST00000612985 164 ntBASIC3.57□□□□□ -1.84
NOD1Q9Y239 PWAR6-201ENST00000552334 4618 ntBASIC3.57□□□□□ -1.84
NOD1Q9Y239 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
NOD1Q9Y239 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.57□□□□□ -1.84
NOD1Q9Y239 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NOD1Q9Y239 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
NOD1Q9Y239 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NOD1Q9Y239 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NOD1Q9Y239 RNU1-70P-201ENST00000362618 164 ntBASIC3.56□□□□□ -1.84
NOD1Q9Y239 Y_RNA.267-201ENST00000364679 109 ntBASIC3.56□□□□□ -1.84
NOD1Q9Y239 SNORA44-201ENST00000384584 132 ntBASIC3.56□□□□□ -1.84
NOD1Q9Y239 Y_RNA.617-201ENST00000410920 90 ntBASIC3.56□□□□□ -1.84
NOD1Q9Y239 AC018634.1-201ENST00000437554 401 ntBASIC3.56□□□□□ -1.84
NOD1Q9Y239 AC018868.1-201ENST00000491307 315 ntBASIC3.56□□□□□ -1.84
NOD1Q9Y239 AC096725.1-201ENST00000514266 313 ntBASIC3.56□□□□□ -1.84
NOD1Q9Y239 MIR5047-201ENST00000579212 100 ntBASIC3.56□□□□□ -1.84
NOD1Q9Y239 AL022345.2-201ENST00000606307 135 ntBASIC3.56□□□□□ -1.84
NOD1Q9Y239 MIR6079-201ENST00000635807 62 ntBASIC3.56□□□□□ -1.84
NOD1Q9Y239 MIR338-201ENST00000636369 67 ntBASIC3.56□□□□□ -1.84
NOD1Q9Y239 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NOD1Q9Y239 AC018630.2-201ENST00000534866 2403 ntBASIC3.55□□□□□ -1.84
NOD1Q9Y239 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NOD1Q9Y239 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.55□□□□□ -1.84
NOD1Q9Y239 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.55□□□□□ -1.84
NOD1Q9Y239 SNORA1-201ENST00000384107 130 ntBASIC3.55□□□□□ -1.84
NOD1Q9Y239 MIR548A3-201ENST00000385297 97 ntBASIC3.55□□□□□ -1.84
NOD1Q9Y239 AL353689.1-201ENST00000438895 199 ntBASIC3.55□□□□□ -1.84
NOD1Q9Y239 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.55□□□□□ -1.84
NOD1Q9Y239 AC006539.3-201ENST00000454258 129 ntBASIC3.55□□□□□ -1.84
NOD1Q9Y239 RNU7-170P-201ENST00000459303 61 ntBASIC3.55□□□□□ -1.84
NOD1Q9Y239 AC008885.1-201ENST00000514930 301 ntBASIC3.55□□□□□ -1.84
NOD1Q9Y239 RNU6-781P-201ENST00000516377 101 ntBASIC3.55□□□□□ -1.84
NOD1Q9Y239 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.55□□□□□ -1.84
NOD1Q9Y239 UBL5P2-201ENST00000583788 219 ntBASIC3.55□□□□□ -1.84
NOD1Q9Y239 MTND5P32-201ENST00000560711 1802 ntBASIC3.55□□□□□ -1.84
NOD1Q9Y239 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
NOD1Q9Y239 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NOD1Q9Y239 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
NOD1Q9Y239 RNU6-755P-201ENST00000364400 103 ntBASIC3.54□□□□□ -1.84
NOD1Q9Y239 AC003685.2-201ENST00000422795 395 ntBASIC3.54□□□□□ -1.84
NOD1Q9Y239 MTATP6P21-201ENST00000440681 189 ntBASIC3.54□□□□□ -1.84
NOD1Q9Y239 RNU1-142P-201ENST00000516682 145 ntBASIC3.54□□□□□ -1.84
NOD1Q9Y239 RNU6-341P-201ENST00000516973 96 ntBASIC3.54□□□□□ -1.84
NOD1Q9Y239 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
NOD1Q9Y239 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NOD1Q9Y239 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
NOD1Q9Y239 SNORD72-201ENST00000390994 80 ntBASIC3.53□□□□□ -1.84
NOD1Q9Y239 SRIP3-201ENST00000413200 219 ntBASIC3.53□□□□□ -1.84
NOD1Q9Y239 AF228730.3-201ENST00000436691 102 ntBASIC3.53□□□□□ -1.84
NOD1Q9Y239 RNU6-1270P-201ENST00000517128 108 ntBASIC3.53□□□□□ -1.84
NOD1Q9Y239 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.53□□□□□ -1.84
NOD1Q9Y239 AL121890.5-201ENST00000620848 304 ntBASIC3.53□□□□□ -1.84
NOD1Q9Y239 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NOD1Q9Y239 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.52□□□□□ -1.85
NOD1Q9Y239 MIR126-201ENST00000362291 85 ntBASIC3.52□□□□□ -1.85
NOD1Q9Y239 SNORA71.1-201ENST00000364523 117 ntBASIC3.52□□□□□ -1.85
NOD1Q9Y239 RNA5SP125-201ENST00000364843 120 ntBASIC3.52□□□□□ -1.85
NOD1Q9Y239 SNORD61-201ENST00000384252 73 ntBASIC3.52□□□□□ -1.85
NOD1Q9Y239 SNORD116-21-201ENST00000384507 92 ntBASIC3.52□□□□□ -1.85
NOD1Q9Y239 AC107083.1-201ENST00000439643 279 ntBASIC3.52□□□□□ -1.85
NOD1Q9Y239 RN7SKP19-201ENST00000516016 252 ntBASIC3.52□□□□□ -1.85
NOD1Q9Y239 MIR2682-201ENST00000580305 110 ntBASIC3.52□□□□□ -1.85
NOD1Q9Y239 AC008507.4-201ENST00000585464 127 ntBASIC3.52□□□□□ -1.85
NOD1Q9Y239 AL353149.1-201ENST00000610667 244 ntBASIC3.52□□□□□ -1.85
NOD1Q9Y239 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.52□□□□□ -1.85
NOD1Q9Y239 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.52□□□□□ -1.85
NOD1Q9Y239 U6.108-201ENST00000637764 58 ntBASIC3.52□□□□□ -1.85
NOD1Q9Y239 MAPK10-362ENST00000641864 4484 ntBASIC3.52□□□□□ -1.85
NOD1Q9Y239 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NOD1Q9Y239 ZNF271P-202ENST00000465539 1970 ntBASIC3.51□□□□□ -1.85
NOD1Q9Y239 SNORD114-6-201ENST00000364393 72 ntBASIC3.51□□□□□ -1.85
NOD1Q9Y239 SNORA25B-201ENST00000365507 128 ntBASIC3.51□□□□□ -1.85
NOD1Q9Y239 SNORA7.4-201ENST00000384249 137 ntBASIC3.51□□□□□ -1.85
NOD1Q9Y239 RNA5SP323-201ENST00000391094 133 ntBASIC3.51□□□□□ -1.85
NOD1Q9Y239 AC063976.4-201ENST00000421971 163 ntBASIC3.51□□□□□ -1.85
NOD1Q9Y239 Y_RNA.651-201ENST00000459380 103 ntBASIC3.51□□□□□ -1.85
NOD1Q9Y239 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms