Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 RPL30P7-201ENST00000479312 323 ntBASIC1.26□□□□□ -2.21
NPC1L1Q9UHC9 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.26□□□□□ -2.21
NPC1L1Q9UHC9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.26□□□□□ -2.21
NPC1L1Q9UHC9 AC022868.1-201ENST00000517767 391 ntBASIC1.26□□□□□ -2.21
NPC1L1Q9UHC9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.26□□□□□ -2.21
NPC1L1Q9UHC9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.26□□□□□ -2.21
NPC1L1Q9UHC9 AC018448.1-201ENST00000552843 316 ntBASIC1.26□□□□□ -2.21
NPC1L1Q9UHC9 AC019288.1-201ENST00000557918 224 ntBASIC1.26□□□□□ -2.21
NPC1L1Q9UHC9 MIR5690-201ENST00000583739 73 ntBASIC1.26□□□□□ -2.21
NPC1L1Q9UHC9 AC025253.1-201ENST00000613623 543 ntBASIC1.26□□□□□ -2.21
NPC1L1Q9UHC9 AL513423.1-201ENST00000621695 132 ntBASIC1.26□□□□□ -2.21
NPC1L1Q9UHC9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
NPC1L1Q9UHC9 Y_RNA.358-201ENST00000365491 99 ntBASIC1.25□□□□□ -2.21
NPC1L1Q9UHC9 MIR625-201ENST00000385047 85 ntBASIC1.25□□□□□ -2.21
NPC1L1Q9UHC9 MT-TL1-201ENST00000386347 75 ntBASIC1.25□□□□□ -2.21
NPC1L1Q9UHC9 AC114482.1-201ENST00000418010 247 ntBASIC1.25□□□□□ -2.21
NPC1L1Q9UHC9 AL606517.2-201ENST00000442855 241 ntBASIC1.25□□□□□ -2.21
NPC1L1Q9UHC9 MIR2053-201ENST00000459295 91 ntBASIC1.25□□□□□ -2.21
NPC1L1Q9UHC9 AC097462.1-201ENST00000514125 324 ntBASIC1.25□□□□□ -2.21
NPC1L1Q9UHC9 SNORA31.10-201ENST00000516482 106 ntBASIC1.25□□□□□ -2.21
NPC1L1Q9UHC9 SCARNA16.2-201ENST00000516520 172 ntBASIC1.25□□□□□ -2.21
NPC1L1Q9UHC9 RNU7-172P-201ENST00000517125 64 ntBASIC1.25□□□□□ -2.21
NPC1L1Q9UHC9 AC027419.1-201ENST00000522976 328 ntBASIC1.25□□□□□ -2.21
NPC1L1Q9UHC9 AC023157.2-201ENST00000540596 141 ntBASIC1.25□□□□□ -2.21
NPC1L1Q9UHC9 CYP3A137P-201ENST00000562436 69 ntBASIC1.25□□□□□ -2.21
NPC1L1Q9UHC9 MIR6857-201ENST00000613267 93 ntBASIC1.25□□□□□ -2.21
NPC1L1Q9UHC9 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.25□□□□□ -2.21
NPC1L1Q9UHC9 RNU1-133P-201ENST00000364867 167 ntBASIC1.24□□□□□ -2.21
NPC1L1Q9UHC9 Y_RNA.404-201ENST00000383978 102 ntBASIC1.24□□□□□ -2.21
NPC1L1Q9UHC9 SNORA20B-201ENST00000384220 132 ntBASIC1.24□□□□□ -2.21
NPC1L1Q9UHC9 Y_RNA.577-201ENST00000384794 101 ntBASIC1.24□□□□□ -2.21
NPC1L1Q9UHC9 ELOCP21-201ENST00000412558 336 ntBASIC1.24□□□□□ -2.21
NPC1L1Q9UHC9 RNU6-625P-201ENST00000459412 107 ntBASIC1.24□□□□□ -2.21
NPC1L1Q9UHC9 RNU6-1278P-201ENST00000516130 107 ntBASIC1.24□□□□□ -2.21
NPC1L1Q9UHC9 RNU7-28P-201ENST00000516759 62 ntBASIC1.24□□□□□ -2.21
NPC1L1Q9UHC9 MIR3973-201ENST00000579824 107 ntBASIC1.24□□□□□ -2.21
NPC1L1Q9UHC9 AL365434.2-201ENST00000607979 234 ntBASIC1.24□□□□□ -2.21
NPC1L1Q9UHC9 AC073349.3-201ENST00000617616 186 ntBASIC1.24□□□□□ -2.21
NPC1L1Q9UHC9 MIR8065-201ENST00000620577 100 ntBASIC1.24□□□□□ -2.21
NPC1L1Q9UHC9 AL669831.3-213ENST00000636676 183 ntBASIC1.24□□□□□ -2.21
NPC1L1Q9UHC9 TPTEP1-208ENST00000636884 213 ntBASIC1.24□□□□□ -2.21
NPC1L1Q9UHC9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.23□□□□□ -2.21
NPC1L1Q9UHC9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.23□□□□□ -2.21
NPC1L1Q9UHC9 RN7SL793P-201ENST00000583259 296 ntBASIC1.23□□□□□ -2.21
NPC1L1Q9UHC9 AL390123.1-201ENST00000603216 237 ntBASIC1.23□□□□□ -2.21
NPC1L1Q9UHC9 FAM71BP1-201ENST00000604431 523 ntBASIC1.23□□□□□ -2.21
NPC1L1Q9UHC9 AC133104.2-201ENST00000615272 193 ntBASIC1.23□□□□□ -2.21
NPC1L1Q9UHC9 AC022306.2-201ENST00000617563 647 ntBASIC1.23□□□□□ -2.21
NPC1L1Q9UHC9 MIR6079-201ENST00000635807 62 ntBASIC1.23□□□□□ -2.21
NPC1L1Q9UHC9 MIR3674-201ENST00000636576 68 ntBASIC1.23□□□□□ -2.21
NPC1L1Q9UHC9 RNU6-874P-201ENST00000362390 105 ntBASIC1.22□□□□□ -2.21
NPC1L1Q9UHC9 SNORD114-7-201ENST00000362520 77 ntBASIC1.22□□□□□ -2.21
NPC1L1Q9UHC9 SNORA27.1-201ENST00000362604 124 ntBASIC1.22□□□□□ -2.21
NPC1L1Q9UHC9 RNU6-407P-201ENST00000365280 104 ntBASIC1.22□□□□□ -2.21
NPC1L1Q9UHC9 MIR618-201ENST00000385287 98 ntBASIC1.22□□□□□ -2.21
NPC1L1Q9UHC9 Y_RNA.599-201ENST00000410489 109 ntBASIC1.22□□□□□ -2.21
NPC1L1Q9UHC9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.22□□□□□ -2.21
NPC1L1Q9UHC9 AC082651.2-201ENST00000496833 166 ntBASIC1.22□□□□□ -2.21
NPC1L1Q9UHC9 SNORA40.9-201ENST00000515895 93 ntBASIC1.22□□□□□ -2.21
NPC1L1Q9UHC9 RNA5SP20-201ENST00000515976 84 ntBASIC1.22□□□□□ -2.21
NPC1L1Q9UHC9 SUMO2P16-201ENST00000519475 264 ntBASIC1.22□□□□□ -2.21
NPC1L1Q9UHC9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.22□□□□□ -2.21
NPC1L1Q9UHC9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.22□□□□□ -2.21
NPC1L1Q9UHC9 AL021879.1-201ENST00000611756 288 ntBASIC1.22□□□□□ -2.21
NPC1L1Q9UHC9 RNA5SP361-201ENST00000362686 118 ntBASIC1.21□□□□□ -2.21
NPC1L1Q9UHC9 RNU6-376P-201ENST00000384731 106 ntBASIC1.21□□□□□ -2.21
NPC1L1Q9UHC9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.21□□□□□ -2.21
NPC1L1Q9UHC9 SNORA69.1-201ENST00000390904 137 ntBASIC1.21□□□□□ -2.21
NPC1L1Q9UHC9 RAB28P5-201ENST00000427490 651 ntBASIC1.21□□□□□ -2.21
NPC1L1Q9UHC9 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.21□□□□□ -2.21
NPC1L1Q9UHC9 RNU6-1132P-201ENST00000459214 107 ntBASIC1.21□□□□□ -2.21
NPC1L1Q9UHC9 RPL39P38-201ENST00000467018 153 ntBASIC1.21□□□□□ -2.21
NPC1L1Q9UHC9 RNU2-56P-201ENST00000516826 190 ntBASIC1.21□□□□□ -2.21
NPC1L1Q9UHC9 RNU7-4P-201ENST00000516961 62 ntBASIC1.21□□□□□ -2.21
NPC1L1Q9UHC9 AC144568.1-201ENST00000520139 137 ntBASIC1.21□□□□□ -2.21
NPC1L1Q9UHC9 AL512310.8-201ENST00000550183 120 ntBASIC1.21□□□□□ -2.21
NPC1L1Q9UHC9 SNORD3E-202ENST00000627253 216 ntBASIC1.21□□□□□ -2.21
NPC1L1Q9UHC9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
NPC1L1Q9UHC9 Y_RNA.265-201ENST00000364677 108 ntBASIC1.21□□□□□ -2.22
NPC1L1Q9UHC9 RNU6-99P-201ENST00000364721 107 ntBASIC1.21□□□□□ -2.22
NPC1L1Q9UHC9 MIR873-201ENST00000401120 77 ntBASIC1.21□□□□□ -2.22
NPC1L1Q9UHC9 AL355796.1-201ENST00000406706 323 ntBASIC1.21□□□□□ -2.22
NPC1L1Q9UHC9 RNU6-370P-201ENST00000411008 104 ntBASIC1.21□□□□□ -2.22
NPC1L1Q9UHC9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.21□□□□□ -2.22
NPC1L1Q9UHC9 PRDX4P1-201ENST00000507189 574 ntBASIC1.21□□□□□ -2.22
NPC1L1Q9UHC9 RNU6-341P-201ENST00000516973 96 ntBASIC1.21□□□□□ -2.22
NPC1L1Q9UHC9 CYP3A52P-201ENST00000563326 91 ntBASIC1.21□□□□□ -2.22
NPC1L1Q9UHC9 MIR1244-1-201ENST00000612829 85 ntBASIC1.21□□□□□ -2.22
NPC1L1Q9UHC9 AL357075.2-201ENST00000614906 189 ntBASIC1.21□□□□□ -2.22
NPC1L1Q9UHC9 MIR1244-3-201ENST00000635744 85 ntBASIC1.21□□□□□ -2.22
NPC1L1Q9UHC9 MIR1244-2-201ENST00000636449 85 ntBASIC1.21□□□□□ -2.22
NPC1L1Q9UHC9 MIR1244-4-202ENST00000636813 85 ntBASIC1.21□□□□□ -2.22
NPC1L1Q9UHC9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
NPC1L1Q9UHC9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
NPC1L1Q9UHC9 SNORA22-201ENST00000383907 134 ntBASIC1.2□□□□□ -2.22
NPC1L1Q9UHC9 RNU6-318P-201ENST00000384283 103 ntBASIC1.2□□□□□ -2.22
NPC1L1Q9UHC9 SNORA22C-201ENST00000384614 134 ntBASIC1.2□□□□□ -2.22
NPC1L1Q9UHC9 MIR520G-201ENST00000385064 90 ntBASIC1.2□□□□□ -2.22
NPC1L1Q9UHC9 MIR660-201ENST00000385235 97 ntBASIC1.2□□□□□ -2.22
NPC1L1Q9UHC9 SNORA75.6-201ENST00000391318 127 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms