Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL096840.1-201ENST00000603287 93 ntBASIC2.1□□□□□ -2.07
LRFN1Q9P244 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.1□□□□□ -2.07
LRFN1Q9P244 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
LRFN1Q9P244 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LRFN1Q9P244 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
LRFN1Q9P244 MIR21-201ENST00000362134 72 ntBASIC2.09□□□□□ -2.07
LRFN1Q9P244 Y_RNA.401-201ENST00000383965 117 ntBASIC2.09□□□□□ -2.07
LRFN1Q9P244 Y_RNA.446-201ENST00000384178 104 ntBASIC2.09□□□□□ -2.07
LRFN1Q9P244 Y_RNA.541-201ENST00000384640 113 ntBASIC2.09□□□□□ -2.07
LRFN1Q9P244 Y_RNA.581-201ENST00000391017 97 ntBASIC2.09□□□□□ -2.07
LRFN1Q9P244 U3.40-201ENST00000408706 208 ntBASIC2.09□□□□□ -2.07
LRFN1Q9P244 AC005042.3-201ENST00000453230 174 ntBASIC2.09□□□□□ -2.07
LRFN1Q9P244 TRBVB-201ENST00000477100 408 ntBASIC2.09□□□□□ -2.07
LRFN1Q9P244 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.09□□□□□ -2.07
LRFN1Q9P244 SEPT14P8-201ENST00000508026 178 ntBASIC2.09□□□□□ -2.07
LRFN1Q9P244 MRPS17P9-201ENST00000511924 393 ntBASIC2.09□□□□□ -2.07
LRFN1Q9P244 AC097462.1-201ENST00000514125 324 ntBASIC2.09□□□□□ -2.07
LRFN1Q9P244 RNA5SP20-201ENST00000515976 84 ntBASIC2.09□□□□□ -2.07
LRFN1Q9P244 RNU6-966P-201ENST00000516479 104 ntBASIC2.09□□□□□ -2.07
LRFN1Q9P244 AC023157.2-201ENST00000540596 141 ntBASIC2.09□□□□□ -2.07
LRFN1Q9P244 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.09□□□□□ -2.07
LRFN1Q9P244 SNORD113-5-201ENST00000607261 78 ntBASIC2.09□□□□□ -2.07
LRFN1Q9P244 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.09□□□□□ -2.07
LRFN1Q9P244 U6.104-201ENST00000637979 90 ntBASIC2.09□□□□□ -2.07
LRFN1Q9P244 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LRFN1Q9P244 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.08□□□□□ -2.08
LRFN1Q9P244 RNU1-22P-201ENST00000363334 158 ntBASIC2.08□□□□□ -2.08
LRFN1Q9P244 Y_RNA.288-201ENST00000364854 92 ntBASIC2.08□□□□□ -2.08
LRFN1Q9P244 RNU6-21P-201ENST00000384710 107 ntBASIC2.08□□□□□ -2.08
LRFN1Q9P244 RNU6-482P-201ENST00000391068 107 ntBASIC2.08□□□□□ -2.08
LRFN1Q9P244 EBAG9P1-201ENST00000418955 543 ntBASIC2.08□□□□□ -2.08
LRFN1Q9P244 HSPE1P25-201ENST00000455484 251 ntBASIC2.08□□□□□ -2.08
LRFN1Q9P244 SNORD127-201ENST00000458892 86 ntBASIC2.08□□□□□ -2.08
LRFN1Q9P244 AL163195.1-201ENST00000496941 348 ntBASIC2.08□□□□□ -2.08
LRFN1Q9P244 HMGB3P17-201ENST00000504195 649 ntBASIC2.08□□□□□ -2.08
LRFN1Q9P244 SNORA70.12-201ENST00000516084 153 ntBASIC2.08□□□□□ -2.08
LRFN1Q9P244 RNA5SP437-201ENST00000517249 129 ntBASIC2.08□□□□□ -2.08
LRFN1Q9P244 AC062037.2-201ENST00000610137 73 ntBASIC2.08□□□□□ -2.08
LRFN1Q9P244 AP001282.2-201ENST00000616149 309 ntBASIC2.08□□□□□ -2.08
LRFN1Q9P244 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.08□□□□□ -2.08
LRFN1Q9P244 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LRFN1Q9P244 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.07□□□□□ -2.08
LRFN1Q9P244 Y_RNA.16-201ENST00000362421 102 ntBASIC2.07□□□□□ -2.08
LRFN1Q9P244 SNORD114-1-201ENST00000362705 72 ntBASIC2.07□□□□□ -2.08
LRFN1Q9P244 RNU6-324P-201ENST00000363957 106 ntBASIC2.07□□□□□ -2.08
LRFN1Q9P244 Y_RNA.331-201ENST00000365267 102 ntBASIC2.07□□□□□ -2.08
LRFN1Q9P244 RNU6-407P-201ENST00000365280 104 ntBASIC2.07□□□□□ -2.08
LRFN1Q9P244 MIR221-201ENST00000385135 110 ntBASIC2.07□□□□□ -2.08
LRFN1Q9P244 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
LRFN1Q9P244 RNU11-5P-201ENST00000391216 129 ntBASIC2.07□□□□□ -2.08
LRFN1Q9P244 AL031003.1-201ENST00000404229 172 ntBASIC2.07□□□□□ -2.08
LRFN1Q9P244 RNU6-1186P-201ENST00000410429 97 ntBASIC2.07□□□□□ -2.08
LRFN1Q9P244 RPS26P55-201ENST00000471178 356 ntBASIC2.07□□□□□ -2.08
LRFN1Q9P244 RPL23AP63-201ENST00000498752 471 ntBASIC2.07□□□□□ -2.08
LRFN1Q9P244 RNU6-548P-201ENST00000517083 115 ntBASIC2.07□□□□□ -2.08
LRFN1Q9P244 AC006006.1-201ENST00000603082 144 ntBASIC2.07□□□□□ -2.08
LRFN1Q9P244 MIR6766-201ENST00000622641 72 ntBASIC2.07□□□□□ -2.08
LRFN1Q9P244 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.06□□□□□ -2.08
LRFN1Q9P244 RNU4-90P-201ENST00000362773 141 ntBASIC2.06□□□□□ -2.08
LRFN1Q9P244 SNORD81.1-201ENST00000363064 77 ntBASIC2.06□□□□□ -2.08
LRFN1Q9P244 Y_RNA.124-201ENST00000363339 93 ntBASIC2.06□□□□□ -2.08
LRFN1Q9P244 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
LRFN1Q9P244 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.06□□□□□ -2.08
LRFN1Q9P244 RNU6-1132P-201ENST00000459214 107 ntBASIC2.06□□□□□ -2.08
LRFN1Q9P244 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.06□□□□□ -2.08
LRFN1Q9P244 AC079804.2-201ENST00000490376 200 ntBASIC2.06□□□□□ -2.08
LRFN1Q9P244 DEFB108E-201ENST00000524692 240 ntBASIC2.06□□□□□ -2.08
LRFN1Q9P244 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.06□□□□□ -2.08
LRFN1Q9P244 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LRFN1Q9P244 AC005336.3-201ENST00000623833 2679 ntBASIC2.05□□□□□ -2.08
LRFN1Q9P244 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LRFN1Q9P244 Y_RNA.237-201ENST00000364439 102 ntBASIC2.05□□□□□ -2.08
LRFN1Q9P244 Y_RNA.518-201ENST00000384552 113 ntBASIC2.05□□□□□ -2.08
LRFN1Q9P244 RNU2-38P-201ENST00000410856 79 ntBASIC2.05□□□□□ -2.08
LRFN1Q9P244 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.05□□□□□ -2.08
LRFN1Q9P244 RPS27P1-201ENST00000450552 247 ntBASIC2.05□□□□□ -2.08
LRFN1Q9P244 RNU6-1338P-201ENST00000516328 91 ntBASIC2.05□□□□□ -2.08
LRFN1Q9P244 RNA5SP481-201ENST00000516814 122 ntBASIC2.05□□□□□ -2.08
LRFN1Q9P244 RNU7-172P-201ENST00000517125 64 ntBASIC2.05□□□□□ -2.08
LRFN1Q9P244 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.05□□□□□ -2.08
LRFN1Q9P244 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.05□□□□□ -2.08
LRFN1Q9P244 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.05□□□□□ -2.08
LRFN1Q9P244 MIR6132-201ENST00000622083 109 ntBASIC2.05□□□□□ -2.08
LRFN1Q9P244 AC127459.3-201ENST00000624328 466 ntBASIC2.05□□□□□ -2.08
LRFN1Q9P244 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.05□□□□□ -2.08
LRFN1Q9P244 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
LRFN1Q9P244 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
LRFN1Q9P244 AL391987.6-201ENST00000305671 199 ntBASIC2.04□□□□□ -2.08
LRFN1Q9P244 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
LRFN1Q9P244 RNU6-661P-201ENST00000362409 107 ntBASIC2.04□□□□□ -2.08
LRFN1Q9P244 Y_RNA.307-201ENST00000365022 117 ntBASIC2.04□□□□□ -2.08
LRFN1Q9P244 RNU6-290P-201ENST00000365212 101 ntBASIC2.04□□□□□ -2.08
LRFN1Q9P244 RNU6-117P-201ENST00000365415 107 ntBASIC2.04□□□□□ -2.08
LRFN1Q9P244 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
LRFN1Q9P244 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.04□□□□□ -2.08
LRFN1Q9P244 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.04□□□□□ -2.08
LRFN1Q9P244 RNU2-7P-201ENST00000410794 178 ntBASIC2.04□□□□□ -2.08
LRFN1Q9P244 RNU2-61P-201ENST00000411069 191 ntBASIC2.04□□□□□ -2.08
LRFN1Q9P244 AC024067.1-201ENST00000426199 223 ntBASIC2.04□□□□□ -2.08
LRFN1Q9P244 HSPE1P13-201ENST00000451143 297 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms