Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 RNU6-443P-201ENST00000384780 107 ntBASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 RNU6-1186P-201ENST00000410429 97 ntBASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 AL392103.1-201ENST00000447000 198 ntBASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 RNU6-437P-201ENST00000459408 95 ntBASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 RN7SL297P-201ENST00000483161 293 ntBASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 RPS29P21-201ENST00000496272 170 ntBASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 RNU6-1146P-201ENST00000516282 102 ntBASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 SNORA9.3-201ENST00000516383 129 ntBASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 MIR5688-201ENST00000580619 83 ntBASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 U6.73-201ENST00000619194 103 ntBASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
KCMF1Q9P0J7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KCMF1Q9P0J7 snoU2-30.2-201ENST00000362805 70 ntBASIC2.58□□□□□ -2
KCMF1Q9P0J7 RNA5SP21-201ENST00000410917 96 ntBASIC2.58□□□□□ -2
KCMF1Q9P0J7 EBAG9P1-201ENST00000418955 543 ntBASIC2.58□□□□□ -2
KCMF1Q9P0J7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.58□□□□□ -2
KCMF1Q9P0J7 AC109810.1-201ENST00000534066 224 ntBASIC2.58□□□□□ -2
KCMF1Q9P0J7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.58□□□□□ -2
KCMF1Q9P0J7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
KCMF1Q9P0J7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KCMF1Q9P0J7 RNU1-109P-201ENST00000383960 147 ntBASIC2.57□□□□□ -2
KCMF1Q9P0J7 SNORA72-201ENST00000384339 132 ntBASIC2.57□□□□□ -2
KCMF1Q9P0J7 MIR9-1-201ENST00000385198 89 ntBASIC2.57□□□□□ -2
KCMF1Q9P0J7 AL606845.1-201ENST00000404881 255 ntBASIC2.57□□□□□ -2
KCMF1Q9P0J7 RPS4XP11-201ENST00000446897 772 ntBASIC2.57□□□□□ -2
KCMF1Q9P0J7 AL121914.1-201ENST00000450188 156 ntBASIC2.57□□□□□ -2
KCMF1Q9P0J7 RNU6-789P-201ENST00000517105 102 ntBASIC2.57□□□□□ -2
KCMF1Q9P0J7 MIR4319-201ENST00000577285 85 ntBASIC2.57□□□□□ -2
KCMF1Q9P0J7 AL929325.1-201ENST00000603096 117 ntBASIC2.57□□□□□ -2
KCMF1Q9P0J7 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.57□□□□□ -2
KCMF1Q9P0J7 AL391903.3-201ENST00000612158 163 ntBASIC2.57□□□□□ -2
KCMF1Q9P0J7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
KCMF1Q9P0J7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.57□□□□□ -2
KCMF1Q9P0J7 AC245060.5-201ENST00000610778 3293 ntBASIC2.57□□□□□ -2
KCMF1Q9P0J7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.57□□□□□ -2
KCMF1Q9P0J7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.56□□□□□ -2
KCMF1Q9P0J7 RNU4-84P-201ENST00000364200 139 ntBASIC2.56□□□□□ -2
KCMF1Q9P0J7 RNU6-449P-201ENST00000383914 107 ntBASIC2.56□□□□□ -2
KCMF1Q9P0J7 RNU6-160P-201ENST00000384591 107 ntBASIC2.56□□□□□ -2
KCMF1Q9P0J7 MIR1278-201ENST00000408753 81 ntBASIC2.56□□□□□ -2
KCMF1Q9P0J7 EDDM3CP-201ENST00000415977 425 ntBASIC2.56□□□□□ -2
KCMF1Q9P0J7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.56□□□□□ -2
KCMF1Q9P0J7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.56□□□□□ -2
KCMF1Q9P0J7 RNU7-26P-201ENST00000458980 63 ntBASIC2.56□□□□□ -2
KCMF1Q9P0J7 AC005840.1-201ENST00000498412 377 ntBASIC2.56□□□□□ -2
KCMF1Q9P0J7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.56□□□□□ -2
KCMF1Q9P0J7 AC073413.2-201ENST00000604332 360 ntBASIC2.56□□□□□ -2
KCMF1Q9P0J7 SNORD115-3-201ENST00000363100 82 ntBASIC2.55□□□□□ -2
KCMF1Q9P0J7 RNU4-41P-201ENST00000364426 143 ntBASIC2.55□□□□□ -2
KCMF1Q9P0J7 RNY1P5-201ENST00000383890 115 ntBASIC2.55□□□□□ -2
KCMF1Q9P0J7 Y_RNA.580-201ENST00000391004 95 ntBASIC2.55□□□□□ -2
KCMF1Q9P0J7 RNA5SP467-201ENST00000391274 118 ntBASIC2.55□□□□□ -2
KCMF1Q9P0J7 HMGN2P35-201ENST00000412164 270 ntBASIC2.55□□□□□ -2
KCMF1Q9P0J7 AL353689.1-201ENST00000438895 199 ntBASIC2.55□□□□□ -2
KCMF1Q9P0J7 UBE2DNL-203ENST00000474922 222 ntBASIC2.55□□□□□ -2
KCMF1Q9P0J7 RNU6-561P-201ENST00000516222 102 ntBASIC2.55□□□□□ -2
KCMF1Q9P0J7 RNU6-406P-201ENST00000516470 107 ntBASIC2.55□□□□□ -2
KCMF1Q9P0J7 AC004486.1-201ENST00000546846 233 ntBASIC2.55□□□□□ -2
KCMF1Q9P0J7 MIR4431-201ENST00000579990 94 ntBASIC2.55□□□□□ -2
KCMF1Q9P0J7 AC007229.1-201ENST00000590455 412 ntBASIC2.55□□□□□ -2
KCMF1Q9P0J7 AC006023.1-201ENST00000603944 259 ntBASIC2.55□□□□□ -2
KCMF1Q9P0J7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.55□□□□□ -2
KCMF1Q9P0J7 MTND1P7-201ENST00000632801 297 ntBASIC2.55□□□□□ -2
KCMF1Q9P0J7 MIR338-201ENST00000636369 67 ntBASIC2.55□□□□□ -2
KCMF1Q9P0J7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.55□□□□□ -2
KCMF1Q9P0J7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
KCMF1Q9P0J7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.54□□□□□ -2
KCMF1Q9P0J7 RNU6-674P-201ENST00000363831 107 ntBASIC2.54□□□□□ -2
KCMF1Q9P0J7 RNU1-96P-201ENST00000364163 162 ntBASIC2.54□□□□□ -2
KCMF1Q9P0J7 RNU1-91P-201ENST00000364746 163 ntBASIC2.54□□□□□ -2
KCMF1Q9P0J7 Y_RNA.500-201ENST00000384466 111 ntBASIC2.54□□□□□ -2
KCMF1Q9P0J7 RNU6-239P-201ENST00000390990 99 ntBASIC2.54□□□□□ -2
KCMF1Q9P0J7 RNU6-1228P-201ENST00000391014 107 ntBASIC2.54□□□□□ -2
KCMF1Q9P0J7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.54□□□□□ -2
KCMF1Q9P0J7 RNU1-131P-201ENST00000458943 161 ntBASIC2.54□□□□□ -2
KCMF1Q9P0J7 SNORD109B-201ENST00000458961 67 ntBASIC2.54□□□□□ -2
KCMF1Q9P0J7 SNORD109A-201ENST00000459128 67 ntBASIC2.54□□□□□ -2
KCMF1Q9P0J7 YWHAEP4-201ENST00000505390 198 ntBASIC2.54□□□□□ -2
KCMF1Q9P0J7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.54□□□□□ -2
KCMF1Q9P0J7 RNU6-1096P-201ENST00000517089 102 ntBASIC2.54□□□□□ -2
KCMF1Q9P0J7 AC011604.1-201ENST00000545978 196 ntBASIC2.54□□□□□ -2
KCMF1Q9P0J7 MIR3910-1-201ENST00000580936 111 ntBASIC2.54□□□□□ -2
KCMF1Q9P0J7 AC022202.1-201ENST00000613515 211 ntBASIC2.54□□□□□ -2
KCMF1Q9P0J7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.54□□□□□ -2
KCMF1Q9P0J7 MAPK10-266ENST00000641066 6555 ntBASIC2.54□□□□□ -2
KCMF1Q9P0J7 Z82195.2-201ENST00000612348 18351 ntBASIC2.53□□□□□ -2
KCMF1Q9P0J7 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.53□□□□□ -2
KCMF1Q9P0J7 MIR15B-201ENST00000385045 98 ntBASIC2.53□□□□□ -2
KCMF1Q9P0J7 RNU2-52P-201ENST00000410680 190 ntBASIC2.53□□□□□ -2
KCMF1Q9P0J7 RNA5SP184-201ENST00000411071 108 ntBASIC2.53□□□□□ -2
KCMF1Q9P0J7 AC006461.1-201ENST00000412637 326 ntBASIC2.53□□□□□ -2
KCMF1Q9P0J7 RPS15AP28-201ENST00000435088 386 ntBASIC2.53□□□□□ -2
KCMF1Q9P0J7 ATP5J2P3-201ENST00000451550 258 ntBASIC2.53□□□□□ -2
KCMF1Q9P0J7 RNU7-99P-201ENST00000516271 62 ntBASIC2.53□□□□□ -2
KCMF1Q9P0J7 RNU6-826P-201ENST00000516827 104 ntBASIC2.53□□□□□ -2
KCMF1Q9P0J7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.53□□□□□ -2
KCMF1Q9P0J7 AL359075.3-201ENST00000613288 217 ntBASIC2.53□□□□□ -2
KCMF1Q9P0J7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.53□□□□□ -2
KCMF1Q9P0J7 AC062016.1-201ENST00000355719 319 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms