Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.96□□□□□ -2.1
DDX4Q9NQI0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.96□□□□□ -2.1
DDX4Q9NQI0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
DDX4Q9NQI0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
DDX4Q9NQI0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
DDX4Q9NQI0 Y_RNA.101-201ENST00000363154 102 ntBASIC1.95□□□□□ -2.1
DDX4Q9NQI0 SNORD115-30-201ENST00000364117 82 ntBASIC1.95□□□□□ -2.1
DDX4Q9NQI0 Y_RNA.214-201ENST00000364201 112 ntBASIC1.95□□□□□ -2.1
DDX4Q9NQI0 Y_RNA.331-201ENST00000365267 102 ntBASIC1.95□□□□□ -2.1
DDX4Q9NQI0 MIR597-201ENST00000384968 97 ntBASIC1.95□□□□□ -2.1
DDX4Q9NQI0 MIR548F4-201ENST00000408515 105 ntBASIC1.95□□□□□ -2.1
DDX4Q9NQI0 AC244636.1-201ENST00000421152 228 ntBASIC1.95□□□□□ -2.1
DDX4Q9NQI0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.95□□□□□ -2.1
DDX4Q9NQI0 RNY3P15-201ENST00000516297 97 ntBASIC1.95□□□□□ -2.1
DDX4Q9NQI0 RNU6-1046P-201ENST00000516538 107 ntBASIC1.95□□□□□ -2.1
DDX4Q9NQI0 AP005660.1-201ENST00000522972 293 ntBASIC1.95□□□□□ -2.1
DDX4Q9NQI0 AC136932.1-201ENST00000574771 208 ntBASIC1.95□□□□□ -2.1
DDX4Q9NQI0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.95□□□□□ -2.1
DDX4Q9NQI0 MIR338-201ENST00000636369 67 ntBASIC1.95□□□□□ -2.1
DDX4Q9NQI0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
DDX4Q9NQI0 Y_RNA.19-201ENST00000362462 99 ntBASIC1.94□□□□□ -2.1
DDX4Q9NQI0 Y_RNA.361-201ENST00000365515 120 ntBASIC1.94□□□□□ -2.1
DDX4Q9NQI0 SNORA20B-201ENST00000384220 132 ntBASIC1.94□□□□□ -2.1
DDX4Q9NQI0 RNU6-713P-201ENST00000384761 107 ntBASIC1.94□□□□□ -2.1
DDX4Q9NQI0 RNU6-1109P-201ENST00000391187 107 ntBASIC1.94□□□□□ -2.1
DDX4Q9NQI0 RNU11-5P-201ENST00000391216 129 ntBASIC1.94□□□□□ -2.1
DDX4Q9NQI0 MIR873-201ENST00000401120 77 ntBASIC1.94□□□□□ -2.1
DDX4Q9NQI0 ELOCP20-201ENST00000422460 345 ntBASIC1.94□□□□□ -2.1
DDX4Q9NQI0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.94□□□□□ -2.1
DDX4Q9NQI0 RNU7-95P-201ENST00000459222 64 ntBASIC1.94□□□□□ -2.1
DDX4Q9NQI0 RNA5SP364-201ENST00000516938 78 ntBASIC1.94□□□□□ -2.1
DDX4Q9NQI0 AC024995.1-201ENST00000523014 93 ntBASIC1.94□□□□□ -2.1
DDX4Q9NQI0 AC069114.2-201ENST00000604699 304 ntBASIC1.94□□□□□ -2.1
DDX4Q9NQI0 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.94□□□□□ -2.1
DDX4Q9NQI0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.94□□□□□ -2.1
DDX4Q9NQI0 SNORA27.1-201ENST00000362604 124 ntBASIC1.93□□□□□ -2.1
DDX4Q9NQI0 RNU4-90P-201ENST00000362773 141 ntBASIC1.93□□□□□ -2.1
DDX4Q9NQI0 SNORD113-8-201ENST00000363497 74 ntBASIC1.93□□□□□ -2.1
DDX4Q9NQI0 Y_RNA.176-201ENST00000363815 109 ntBASIC1.93□□□□□ -2.1
DDX4Q9NQI0 SNORA48.1-201ENST00000390879 135 ntBASIC1.93□□□□□ -2.1
DDX4Q9NQI0 Y_RNA.581-201ENST00000391017 97 ntBASIC1.93□□□□□ -2.1
DDX4Q9NQI0 AL117342.1-201ENST00000404861 406 ntBASIC1.93□□□□□ -2.1
DDX4Q9NQI0 RNU6-321P-201ENST00000410912 106 ntBASIC1.93□□□□□ -2.1
DDX4Q9NQI0 MRPS10P1-201ENST00000448483 130 ntBASIC1.93□□□□□ -2.1
DDX4Q9NQI0 MTND4LP30-201ENST00000454092 297 ntBASIC1.93□□□□□ -2.1
DDX4Q9NQI0 LINC01399-202ENST00000458450 244 ntBASIC1.93□□□□□ -2.1
DDX4Q9NQI0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.93□□□□□ -2.1
DDX4Q9NQI0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.93□□□□□ -2.1
DDX4Q9NQI0 RNU6-635P-201ENST00000516651 102 ntBASIC1.93□□□□□ -2.1
DDX4Q9NQI0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.93□□□□□ -2.1
DDX4Q9NQI0 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.93□□□□□ -2.1
DDX4Q9NQI0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
DDX4Q9NQI0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
DDX4Q9NQI0 Y_RNA.149-201ENST00000363558 117 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 RNU6-324P-201ENST00000363957 106 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 RNU1-96P-201ENST00000364163 162 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 Y_RNA.287-201ENST00000364853 94 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 RNA5SP212-201ENST00000391223 107 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 AL031003.1-201ENST00000404229 172 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 AL355796.1-201ENST00000406706 323 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 RNU6-710P-201ENST00000410424 105 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 RNU6-1199P-201ENST00000411249 104 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 AL358176.2-201ENST00000425769 204 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 AC024067.1-201ENST00000426199 223 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 AC069257.2-201ENST00000441819 155 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.92□□□□□ -2.1
DDX4Q9NQI0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.92□□□□□ -2.1
DDX4Q9NQI0 AP003733.2-201ENST00000529409 171 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.92□□□□□ -2.1
DDX4Q9NQI0 DNAJC19P9-201ENST00000555084 351 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 MIR3618-201ENST00000580330 88 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 MIR4781-201ENST00000585250 76 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 AL359075.3-201ENST00000613288 217 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 AC022513.1-201ENST00000624512 117 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 U6.104-201ENST00000637979 90 ntBASIC1.92□□□□□ -2.1
DDX4Q9NQI0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.91□□□□□ -2.1
DDX4Q9NQI0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.91□□□□□ -2.1
DDX4Q9NQI0 RNU6-862P-201ENST00000362804 105 ntBASIC1.91□□□□□ -2.1
DDX4Q9NQI0 RNU1-42P-201ENST00000364033 160 ntBASIC1.91□□□□□ -2.1
DDX4Q9NQI0 RNU6-417P-201ENST00000384712 107 ntBASIC1.91□□□□□ -2.1
DDX4Q9NQI0 Y_RNA.574-201ENST00000384766 95 ntBASIC1.91□□□□□ -2.1
DDX4Q9NQI0 MIR1323-201ENST00000408090 73 ntBASIC1.91□□□□□ -2.1
DDX4Q9NQI0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.91□□□□□ -2.1
DDX4Q9NQI0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.91□□□□□ -2.1
DDX4Q9NQI0 RPS27P22-201ENST00000478056 241 ntBASIC1.91□□□□□ -2.1
DDX4Q9NQI0 RNU6-496P-201ENST00000516145 99 ntBASIC1.91□□□□□ -2.1
DDX4Q9NQI0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.91□□□□□ -2.1
DDX4Q9NQI0 U6.73-201ENST00000619194 103 ntBASIC1.91□□□□□ -2.1
DDX4Q9NQI0 AC127459.3-201ENST00000624328 466 ntBASIC1.91□□□□□ -2.1
DDX4Q9NQI0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
DDX4Q9NQI0 AC245060.5-201ENST00000610778 3293 ntBASIC1.9□□□□□ -2.1
DDX4Q9NQI0 Y_RNA.222-201ENST00000364264 102 ntBASIC1.9□□□□□ -2.11
DDX4Q9NQI0 RNU6-60P-201ENST00000364792 103 ntBASIC1.9□□□□□ -2.11
DDX4Q9NQI0 RNU6-407P-201ENST00000365280 104 ntBASIC1.9□□□□□ -2.11
DDX4Q9NQI0 RNU6-1248P-201ENST00000391096 64 ntBASIC1.9□□□□□ -2.11
DDX4Q9NQI0 RNU4-30P-201ENST00000410245 143 ntBASIC1.9□□□□□ -2.11
DDX4Q9NQI0 RNU6-121P-201ENST00000410525 99 ntBASIC1.9□□□□□ -2.11
DDX4Q9NQI0 RNA5SP501-201ENST00000410990 112 ntBASIC1.9□□□□□ -2.11
DDX4Q9NQI0 POLR2KP2-201ENST00000438155 177 ntBASIC1.9□□□□□ -2.11
DDX4Q9NQI0 DYNLT3P2-201ENST00000442517 295 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms