Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
ATXN3LQ9H3M9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ATXN3LQ9H3M9 MIR562-201ENST00000384894 95 ntBASIC3.17□□□□□ -1.9
ATXN3LQ9H3M9 MIR1289-1-201ENST00000408836 144 ntBASIC3.17□□□□□ -1.9
ATXN3LQ9H3M9 AC063976.3-201ENST00000426849 329 ntBASIC3.17□□□□□ -1.9
ATXN3LQ9H3M9 MTCO1P44-201ENST00000441935 243 ntBASIC3.17□□□□□ -1.9
ATXN3LQ9H3M9 RPS29P21-201ENST00000496272 170 ntBASIC3.17□□□□□ -1.9
ATXN3LQ9H3M9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.17□□□□□ -1.9
ATXN3LQ9H3M9 AL670379.3-201ENST00000605040 251 ntBASIC3.17□□□□□ -1.9
ATXN3LQ9H3M9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ATXN3LQ9H3M9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATXN3LQ9H3M9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATXN3LQ9H3M9 RNA5SP383-201ENST00000362934 120 ntBASIC3.16□□□□□ -1.9
ATXN3LQ9H3M9 SNORD58C-201ENST00000365223 64 ntBASIC3.16□□□□□ -1.9
ATXN3LQ9H3M9 Y_RNA.486-201ENST00000384398 107 ntBASIC3.16□□□□□ -1.9
ATXN3LQ9H3M9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ATXN3LQ9H3M9 AL603914.1-201ENST00000401964 204 ntBASIC3.16□□□□□ -1.9
ATXN3LQ9H3M9 RPL32P35-201ENST00000415214 394 ntBASIC3.16□□□□□ -1.9
ATXN3LQ9H3M9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.16□□□□□ -1.9
ATXN3LQ9H3M9 OR9P1P-201ENST00000496431 281 ntBASIC3.16□□□□□ -1.9
ATXN3LQ9H3M9 SCGB1D5P-201ENST00000515134 247 ntBASIC3.16□□□□□ -1.9
ATXN3LQ9H3M9 RNU6-991P-201ENST00000516168 107 ntBASIC3.16□□□□□ -1.9
ATXN3LQ9H3M9 RNU6-781P-201ENST00000516377 101 ntBASIC3.16□□□□□ -1.9
ATXN3LQ9H3M9 SNORD59.2-201ENST00000516873 68 ntBASIC3.16□□□□□ -1.9
ATXN3LQ9H3M9 SCARNA3-201ENST00000517097 143 ntBASIC3.16□□□□□ -1.9
ATXN3LQ9H3M9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ATXN3LQ9H3M9 AC080128.1-201ENST00000474389 1917 ntBASIC3.16□□□□□ -1.9
ATXN3LQ9H3M9 MAPK10-322ENST00000641485 4530 ntBASIC3.16□□□□□ -1.9
ATXN3LQ9H3M9 AL136360.1-201ENST00000503377 1900 ntBASIC3.15□□□□□ -1.9
ATXN3LQ9H3M9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.15□□□□□ -1.9
ATXN3LQ9H3M9 Y_RNA.52-201ENST00000362760 96 ntBASIC3.15□□□□□ -1.91
ATXN3LQ9H3M9 RNU1-23P-201ENST00000363361 144 ntBASIC3.15□□□□□ -1.91
ATXN3LQ9H3M9 CD24P4-201ENST00000382840 243 ntBASIC3.15□□□□□ -1.91
ATXN3LQ9H3M9 MIR1253-201ENST00000408273 105 ntBASIC3.15□□□□□ -1.91
ATXN3LQ9H3M9 U6atac.2-201ENST00000408644 118 ntBASIC3.15□□□□□ -1.91
ATXN3LQ9H3M9 AL513477.1-202ENST00000417061 214 ntBASIC3.15□□□□□ -1.91
ATXN3LQ9H3M9 AC063976.4-201ENST00000421971 163 ntBASIC3.15□□□□□ -1.91
ATXN3LQ9H3M9 AC009969.1-201ENST00000438726 172 ntBASIC3.15□□□□□ -1.91
ATXN3LQ9H3M9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.15□□□□□ -1.91
ATXN3LQ9H3M9 RPS26P45-201ENST00000471748 340 ntBASIC3.15□□□□□ -1.91
ATXN3LQ9H3M9 SNORA18.4-201ENST00000516440 124 ntBASIC3.15□□□□□ -1.91
ATXN3LQ9H3M9 RNU6-1096P-201ENST00000517089 102 ntBASIC3.15□□□□□ -1.91
ATXN3LQ9H3M9 MIR4513-201ENST00000581077 86 ntBASIC3.15□□□□□ -1.91
ATXN3LQ9H3M9 JPX_2.1-201ENST00000614161 69 ntBASIC3.15□□□□□ -1.91
ATXN3LQ9H3M9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
ATXN3LQ9H3M9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ATXN3LQ9H3M9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ATXN3LQ9H3M9 RNU6-1164P-201ENST00000364428 107 ntBASIC3.14□□□□□ -1.91
ATXN3LQ9H3M9 RNU6-1138P-201ENST00000365359 106 ntBASIC3.14□□□□□ -1.91
ATXN3LQ9H3M9 RNU6-147P-201ENST00000383983 107 ntBASIC3.14□□□□□ -1.91
ATXN3LQ9H3M9 MIR548A3-201ENST00000385297 97 ntBASIC3.14□□□□□ -1.91
ATXN3LQ9H3M9 SNORA26-201ENST00000391286 122 ntBASIC3.14□□□□□ -1.91
ATXN3LQ9H3M9 FO393413.1-201ENST00000402892 195 ntBASIC3.14□□□□□ -1.91
ATXN3LQ9H3M9 Y_RNA.621-201ENST00000411065 96 ntBASIC3.14□□□□□ -1.91
ATXN3LQ9H3M9 AL139132.1-201ENST00000431587 344 ntBASIC3.14□□□□□ -1.91
ATXN3LQ9H3M9 MICF-203ENST00000432679 129 ntBASIC3.14□□□□□ -1.91
ATXN3LQ9H3M9 RPL23AP94-201ENST00000512518 302 ntBASIC3.14□□□□□ -1.91
ATXN3LQ9H3M9 RNU1-104P-201ENST00000517280 175 ntBASIC3.14□□□□□ -1.91
ATXN3LQ9H3M9 AC007751.1-201ENST00000529260 376 ntBASIC3.14□□□□□ -1.91
ATXN3LQ9H3M9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.14□□□□□ -1.91
ATXN3LQ9H3M9 U6.73-201ENST00000619194 103 ntBASIC3.14□□□□□ -1.91
ATXN3LQ9H3M9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.14□□□□□ -1.91
ATXN3LQ9H3M9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
ATXN3LQ9H3M9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
ATXN3LQ9H3M9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ATXN3LQ9H3M9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
ATXN3LQ9H3M9 Y_RNA.35-201ENST00000362601 101 ntBASIC3.13□□□□□ -1.91
ATXN3LQ9H3M9 RNU6-647P-201ENST00000364243 107 ntBASIC3.13□□□□□ -1.91
ATXN3LQ9H3M9 RNU1-101P-201ENST00000391171 127 ntBASIC3.13□□□□□ -1.91
ATXN3LQ9H3M9 Y_RNA.617-201ENST00000410920 90 ntBASIC3.13□□□□□ -1.91
ATXN3LQ9H3M9 HMGN2P34-201ENST00000437647 269 ntBASIC3.13□□□□□ -1.91
ATXN3LQ9H3M9 AL161788.1-201ENST00000441805 169 ntBASIC3.13□□□□□ -1.91
ATXN3LQ9H3M9 AC093259.1-201ENST00000509755 300 ntBASIC3.13□□□□□ -1.91
ATXN3LQ9H3M9 SNORA4.4-201ENST00000515921 135 ntBASIC3.13□□□□□ -1.91
ATXN3LQ9H3M9 RNA5SP170-201ENST00000517150 101 ntBASIC3.13□□□□□ -1.91
ATXN3LQ9H3M9 MIR4679-2-201ENST00000578358 77 ntBASIC3.13□□□□□ -1.91
ATXN3LQ9H3M9 AC073413.2-201ENST00000604332 360 ntBASIC3.13□□□□□ -1.91
ATXN3LQ9H3M9 U2.20-201ENST00000613956 192 ntBASIC3.13□□□□□ -1.91
ATXN3LQ9H3M9 MIR7157-201ENST00000635801 60 ntBASIC3.13□□□□□ -1.91
ATXN3LQ9H3M9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 Y_RNA.43-201ENST00000362670 111 ntBASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 Y_RNA.66-201ENST00000362862 102 ntBASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 SNORD116-21-201ENST00000384507 92 ntBASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 RNU6-1186P-201ENST00000410429 97 ntBASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 RNA5SP127-201ENST00000411051 133 ntBASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 AC123900.1-201ENST00000420390 96 ntBASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 AC060773.1-201ENST00000421698 310 ntBASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 AC244505.4-201ENST00000434905 287 ntBASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 SSXP5-201ENST00000443473 287 ntBASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 CKS1BP2-201ENST00000497342 240 ntBASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 RNA5SP367-201ENST00000516557 118 ntBASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 RNU6-856P-201ENST00000516959 98 ntBASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 RNU6-365P-201ENST00000517113 106 ntBASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 MIR4662B-201ENST00000579498 81 ntBASIC3.12□□□□□ -1.91
ATXN3LQ9H3M9 AC091178.2-201ENST00000584401 117 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms