Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 RPS29P11-201ENST00000496507 171 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 RNVU1-2-201ENST00000516326 135 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 AC027419.1-201ENST00000522976 328 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 SUB1P4-201ENST00000566062 339 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 AC055872.1-201ENST00000570978 278 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 snoU13.31-201ENST00000607291 104 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 AC022513.1-201ENST00000624512 117 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 AC010615.1-201ENST00000594254 1764 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 SNORA16B-201ENST00000364674 135 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-407P-201ENST00000365280 104 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 Y_RNA.361-201ENST00000365515 120 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 Y_RNA.459-201ENST00000384251 102 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 SNORA8-201ENST00000384574 139 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 MIR520A-201ENST00000384862 85 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 SNORD115-46-201ENST00000390982 71 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-1248P-201ENST00000391096 64 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 AL031003.1-201ENST00000404229 172 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 AC108667.1-201ENST00000428618 249 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 MTND5P22-201ENST00000458380 195 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 RNA5SP233-201ENST00000459153 113 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 RNA5SP57-201ENST00000459463 123 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 MTATP8P1-201ENST00000467115 207 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 RPS27P21-201ENST00000486977 252 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 MRPS35P2-201ENST00000508242 191 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 AC107393.1-201ENST00000512403 346 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-1278P-201ENST00000516130 107 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 RNY3P15-201ENST00000516297 97 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-1045P-201ENST00000516321 107 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 MIR3683-201ENST00000580847 82 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 AC136443.5-201ENST00000603741 370 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 PRR13P7-201ENST00000605538 430 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 AL773524.1-201ENST00000614065 229 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 MIR7111-201ENST00000619751 72 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 AC084768.2-201ENST00000622736 221 ntBASIC1.96□□□□□ -2.1
CLSTN3Q9BQT9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 RNA5SP276-201ENST00000362580 94 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 Y_RNA.214-201ENST00000364201 112 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-1186P-201ENST00000410429 97 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-1199P-201ENST00000411249 104 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 AC244636.1-201ENST00000421152 228 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 ELOCP20-201ENST00000422460 345 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 AL731563.1-201ENST00000442202 214 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 HSPE1P13-201ENST00000451143 297 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 MTND4LP30-201ENST00000454092 297 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 RPS26P55-201ENST00000471178 356 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-1046P-201ENST00000516538 107 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 RNA5SP481-201ENST00000516814 122 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 RNU1-40P-201ENST00000516816 164 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 RNU1-97P-201ENST00000516872 164 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 AC084364.2-201ENST00000546924 395 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 MIR4300-201ENST00000581016 96 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 AC012493.3-201ENST00000604494 112 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 AC127459.3-201ENST00000624328 466 ntBASIC1.95□□□□□ -2.1
CLSTN3Q9BQT9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 MIR378A-201ENST00000362177 66 ntBASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 Y_RNA.19-201ENST00000362462 99 ntBASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 RNU4-90P-201ENST00000362773 141 ntBASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 SNORD113-8-201ENST00000363497 74 ntBASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 RNA5SP190-201ENST00000365222 118 ntBASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-950P-201ENST00000384651 107 ntBASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 RNA5SP467-201ENST00000391274 118 ntBASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 MIR548F4-201ENST00000408515 105 ntBASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 RNU2-7P-201ENST00000410794 178 ntBASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 RNU2-40P-201ENST00000410833 196 ntBASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 AC097462.1-201ENST00000514125 324 ntBASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-436P-201ENST00000516171 114 ntBASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-250P-201ENST00000516958 103 ntBASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 RNU7-172P-201ENST00000517125 64 ntBASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 AC023157.2-201ENST00000540596 141 ntBASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 AC136932.1-201ENST00000574771 208 ntBASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 MIR8081-201ENST00000611533 95 ntBASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 U6.104-201ENST00000637979 90 ntBASIC1.94□□□□□ -2.1
CLSTN3Q9BQT9 Y_RNA.105-201ENST00000363182 111 ntBASIC1.93□□□□□ -2.1
CLSTN3Q9BQT9 RNU1-22P-201ENST00000363334 158 ntBASIC1.93□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-713P-201ENST00000384761 107 ntBASIC1.93□□□□□ -2.1
CLSTN3Q9BQT9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CLSTN3Q9BQT9 AL627390.1-201ENST00000396055 340 ntBASIC1.93□□□□□ -2.1
CLSTN3Q9BQT9 RPL21P1-201ENST00000399532 476 ntBASIC1.93□□□□□ -2.1
CLSTN3Q9BQT9 SUMO2P12-201ENST00000405924 140 ntBASIC1.93□□□□□ -2.1
CLSTN3Q9BQT9 AC009310.1-201ENST00000414414 451 ntBASIC1.93□□□□□ -2.1
CLSTN3Q9BQT9 POLR2KP2-201ENST00000438155 177 ntBASIC1.93□□□□□ -2.1
CLSTN3Q9BQT9 SNORD13-201ENST00000459299 104 ntBASIC1.93□□□□□ -2.1
CLSTN3Q9BQT9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.93□□□□□ -2.1
CLSTN3Q9BQT9 SNORA25.15-201ENST00000516487 89 ntBASIC1.93□□□□□ -2.1
CLSTN3Q9BQT9 AL359851.1-201ENST00000569460 4997 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 322 ms