Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 RNA5SP87-201ENST00000384155 118 ntBASIC4.15□□□□□ -1.75
MS4A3Q96HJ5 MIR218-1-201ENST00000384999 110 ntBASIC4.15□□□□□ -1.75
MS4A3Q96HJ5 MIR937-201ENST00000401271 86 ntBASIC4.15□□□□□ -1.75
MS4A3Q96HJ5 AC026726.1-201ENST00000512859 601 ntBASIC4.15□□□□□ -1.75
MS4A3Q96HJ5 RNU6-75P-201ENST00000515944 104 ntBASIC4.15□□□□□ -1.75
MS4A3Q96HJ5 IGLV3-26-201ENST00000520756 302 ntBASIC4.15□□□□□ -1.75
MS4A3Q96HJ5 SNORD92-201ENST00000585078 85 ntBASIC4.15□□□□□ -1.75
MS4A3Q96HJ5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.15□□□□□ -1.75
MS4A3Q96HJ5 AL391358.1-201ENST00000605342 190 ntBASIC4.15□□□□□ -1.75
MS4A3Q96HJ5 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
MS4A3Q96HJ5 AC107068.1-201ENST00000563286 4218 ntBASIC4.15□□□□□ -1.75
MS4A3Q96HJ5 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
MS4A3Q96HJ5 AC092435.4-201ENST00000623012 4159 ntBASIC4.15□□□□□ -1.75
MS4A3Q96HJ5 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
MS4A3Q96HJ5 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
MS4A3Q96HJ5 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
MS4A3Q96HJ5 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
MS4A3Q96HJ5 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MS4A3Q96HJ5 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.14□□□□□ -1.75
MS4A3Q96HJ5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.14□□□□□ -1.75
MS4A3Q96HJ5 RPL23AP6-201ENST00000446637 472 ntBASIC4.14□□□□□ -1.75
MS4A3Q96HJ5 AL031183.1-201ENST00000457667 207 ntBASIC4.14□□□□□ -1.75
MS4A3Q96HJ5 SNORD123-201ENST00000459473 70 ntBASIC4.14□□□□□ -1.75
MS4A3Q96HJ5 SCARNA22-201ENST00000503991 125 ntBASIC4.14□□□□□ -1.75
MS4A3Q96HJ5 RNU7-12P-201ENST00000516030 62 ntBASIC4.14□□□□□ -1.75
MS4A3Q96HJ5 RNU4ATAC9P-201ENST00000517146 126 ntBASIC4.14□□□□□ -1.75
MS4A3Q96HJ5 AC091042.1-201ENST00000579213 173 ntBASIC4.14□□□□□ -1.75
MS4A3Q96HJ5 MIR6853-201ENST00000619642 74 ntBASIC4.14□□□□□ -1.75
MS4A3Q96HJ5 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MS4A3Q96HJ5 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MS4A3Q96HJ5 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MS4A3Q96HJ5 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 MAPK10-303ENST00000641324 3959 ntBASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 Y_RNA.236-201ENST00000364427 111 ntBASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 MIR585-201ENST00000384887 94 ntBASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 RNU6-667P-201ENST00000517186 102 ntBASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 AC209154.1-201ENST00000582156 337 ntBASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 AC069114.2-201ENST00000604699 304 ntBASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 SNORA62.6-201ENST00000606322 83 ntBASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 AC139713.2-215ENST00000641428 5037 ntBASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 AP000648.3-201ENST00000623539 4507 ntBASIC4.13□□□□□ -1.75
MS4A3Q96HJ5 AL136164.3-201ENST00000624429 3978 ntBASIC4.12□□□□□ -1.75
MS4A3Q96HJ5 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
MS4A3Q96HJ5 RNA5SP72-201ENST00000364442 117 ntBASIC4.12□□□□□ -1.75
MS4A3Q96HJ5 Y_RNA.283-201ENST00000364798 112 ntBASIC4.12□□□□□ -1.75
MS4A3Q96HJ5 MIR708-201ENST00000390708 88 ntBASIC4.12□□□□□ -1.75
MS4A3Q96HJ5 AL034345.1-201ENST00000407768 123 ntBASIC4.12□□□□□ -1.75
MS4A3Q96HJ5 AC069285.2-201ENST00000440210 275 ntBASIC4.12□□□□□ -1.75
MS4A3Q96HJ5 RNU1-6P-201ENST00000516290 144 ntBASIC4.12□□□□□ -1.75
MS4A3Q96HJ5 RNU6-881P-201ENST00000516813 102 ntBASIC4.12□□□□□ -1.75
MS4A3Q96HJ5 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.12□□□□□ -1.75
MS4A3Q96HJ5 MIR4270-201ENST00000581799 70 ntBASIC4.12□□□□□ -1.75
MS4A3Q96HJ5 MIR3199-1-201ENST00000582434 88 ntBASIC4.12□□□□□ -1.75
MS4A3Q96HJ5 MIR8053-201ENST00000613344 75 ntBASIC4.12□□□□□ -1.75
MS4A3Q96HJ5 AC022149.2-201ENST00000621061 203 ntBASIC4.12□□□□□ -1.75
MS4A3Q96HJ5 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.12□□□□□ -1.75
MS4A3Q96HJ5 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MS4A3Q96HJ5 MFSD8-216ENST00000641147 4009 ntBASIC4.12□□□□□ -1.75
MS4A3Q96HJ5 GABRG2-229ENST00000641017 3628 ntBASIC4.12□□□□□ -1.75
MS4A3Q96HJ5 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
MS4A3Q96HJ5 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.11□□□□□ -1.75
MS4A3Q96HJ5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MS4A3Q96HJ5 SNORD45A-201ENST00000384512 84 ntBASIC4.11□□□□□ -1.75
MS4A3Q96HJ5 RNU6-291P-201ENST00000384720 107 ntBASIC4.11□□□□□ -1.75
MS4A3Q96HJ5 CYCSP35-201ENST00000451978 304 ntBASIC4.11□□□□□ -1.75
MS4A3Q96HJ5 SCARNA10-201ENST00000459255 330 ntBASIC4.11□□□□□ -1.75
MS4A3Q96HJ5 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.11□□□□□ -1.75
MS4A3Q96HJ5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC4.11□□□□□ -1.75
MS4A3Q96HJ5 SNORA31.10-201ENST00000516482 106 ntBASIC4.11□□□□□ -1.75
MS4A3Q96HJ5 RNA5SP168-201ENST00000516642 112 ntBASIC4.11□□□□□ -1.75
MS4A3Q96HJ5 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.11□□□□□ -1.75
MS4A3Q96HJ5 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
MS4A3Q96HJ5 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MS4A3Q96HJ5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
MS4A3Q96HJ5 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.11□□□□□ -1.75
MS4A3Q96HJ5 MIR448-201ENST00000362131 111 ntBASIC4.1□□□□□ -1.75
MS4A3Q96HJ5 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
MS4A3Q96HJ5 SNORA11.4-201ENST00000408823 129 ntBASIC4.1□□□□□ -1.75
MS4A3Q96HJ5 AC016831.4-201ENST00000438302 307 ntBASIC4.1□□□□□ -1.75
MS4A3Q96HJ5 RPS27P21-201ENST00000486977 252 ntBASIC4.1□□□□□ -1.75
MS4A3Q96HJ5 RPL12P50-201ENST00000603116 116 ntBASIC4.1□□□□□ -1.75
MS4A3Q96HJ5 MIR7154-201ENST00000620673 73 ntBASIC4.1□□□□□ -1.75
MS4A3Q96HJ5 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
MS4A3Q96HJ5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
MS4A3Q96HJ5 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MS4A3Q96HJ5 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MS4A3Q96HJ5 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.09□□□□□ -1.75
MS4A3Q96HJ5 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
MS4A3Q96HJ5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
MS4A3Q96HJ5 MAPK10-253ENST00000641010 4072 ntBASIC4.09□□□□□ -1.75
MS4A3Q96HJ5 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms