Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
RAPGEF4Q8WZA2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
RAPGEF4Q8WZA2 SNORD114-6-201ENST00000364393 72 ntBASIC2.4□□□□□ -2.03
RAPGEF4Q8WZA2 RNU6-1164P-201ENST00000364428 107 ntBASIC2.4□□□□□ -2.03
RAPGEF4Q8WZA2 RNU6-1240P-201ENST00000365155 104 ntBASIC2.4□□□□□ -2.03
RAPGEF4Q8WZA2 Y_RNA.329-201ENST00000365209 107 ntBASIC2.4□□□□□ -2.03
RAPGEF4Q8WZA2 Y_RNA.447-201ENST00000384184 113 ntBASIC2.4□□□□□ -2.03
RAPGEF4Q8WZA2 SNORA20B-201ENST00000384220 132 ntBASIC2.4□□□□□ -2.03
RAPGEF4Q8WZA2 RNU6-160P-201ENST00000384591 107 ntBASIC2.4□□□□□ -2.03
RAPGEF4Q8WZA2 MIR29C-201ENST00000385231 88 ntBASIC2.4□□□□□ -2.03
RAPGEF4Q8WZA2 RNU2-61P-201ENST00000411069 191 ntBASIC2.4□□□□□ -2.03
RAPGEF4Q8WZA2 MTCO1P5-201ENST00000433573 344 ntBASIC2.4□□□□□ -2.03
RAPGEF4Q8WZA2 MRPS10P1-201ENST00000448483 130 ntBASIC2.4□□□□□ -2.03
RAPGEF4Q8WZA2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.4□□□□□ -2.03
RAPGEF4Q8WZA2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.4□□□□□ -2.03
RAPGEF4Q8WZA2 AC037487.3-201ENST00000606668 112 ntBASIC2.4□□□□□ -2.03
RAPGEF4Q8WZA2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
RAPGEF4Q8WZA2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RAPGEF4Q8WZA2 RNU6-1266P-201ENST00000362794 105 ntBASIC2.39□□□□□ -2.03
RAPGEF4Q8WZA2 Y_RNA.188-201ENST00000363952 111 ntBASIC2.39□□□□□ -2.03
RAPGEF4Q8WZA2 Y_RNA.352-201ENST00000365439 102 ntBASIC2.39□□□□□ -2.03
RAPGEF4Q8WZA2 MIR524-201ENST00000385242 87 ntBASIC2.39□□□□□ -2.03
RAPGEF4Q8WZA2 MIR548H3-201ENST00000408771 118 ntBASIC2.39□□□□□ -2.03
RAPGEF4Q8WZA2 AC060773.1-201ENST00000421698 310 ntBASIC2.39□□□□□ -2.03
RAPGEF4Q8WZA2 SUMO2P18-201ENST00000518873 252 ntBASIC2.39□□□□□ -2.03
RAPGEF4Q8WZA2 MIR3126-201ENST00000577443 74 ntBASIC2.39□□□□□ -2.03
RAPGEF4Q8WZA2 DEFB117-201ENST00000602356 141 ntBASIC2.39□□□□□ -2.03
RAPGEF4Q8WZA2 AL353149.1-201ENST00000610667 244 ntBASIC2.39□□□□□ -2.03
RAPGEF4Q8WZA2 AC022202.1-201ENST00000613515 211 ntBASIC2.39□□□□□ -2.03
RAPGEF4Q8WZA2 U2.14-201ENST00000615943 113 ntBASIC2.39□□□□□ -2.03
RAPGEF4Q8WZA2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RAPGEF4Q8WZA2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RAPGEF4Q8WZA2 UBE2WP1-201ENST00000362030 340 ntBASIC2.38□□□□□ -2.03
RAPGEF4Q8WZA2 SNORA27.1-201ENST00000362604 124 ntBASIC2.38□□□□□ -2.03
RAPGEF4Q8WZA2 Y_RNA.478-201ENST00000384358 107 ntBASIC2.38□□□□□ -2.03
RAPGEF4Q8WZA2 MIR873-201ENST00000401120 77 ntBASIC2.38□□□□□ -2.03
RAPGEF4Q8WZA2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.38□□□□□ -2.03
RAPGEF4Q8WZA2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.38□□□□□ -2.03
RAPGEF4Q8WZA2 AC079804.2-201ENST00000490376 200 ntBASIC2.38□□□□□ -2.03
RAPGEF4Q8WZA2 SNORA70.12-201ENST00000516084 153 ntBASIC2.38□□□□□ -2.03
RAPGEF4Q8WZA2 RNU6-1023P-201ENST00000516137 106 ntBASIC2.38□□□□□ -2.03
RAPGEF4Q8WZA2 Y_RNA.673-201ENST00000516306 88 ntBASIC2.38□□□□□ -2.03
RAPGEF4Q8WZA2 Y_RNA.680-201ENST00000516441 93 ntBASIC2.38□□□□□ -2.03
RAPGEF4Q8WZA2 SCARNA24.2-201ENST00000516968 130 ntBASIC2.38□□□□□ -2.03
RAPGEF4Q8WZA2 IGLV3-17-201ENST00000519099 244 ntBASIC2.38□□□□□ -2.03
RAPGEF4Q8WZA2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.38□□□□□ -2.03
RAPGEF4Q8WZA2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RAPGEF4Q8WZA2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 SNORA25.1-201ENST00000362326 128 ntBASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 RNU6-661P-201ENST00000362409 107 ntBASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 RNU6-271P-201ENST00000363858 105 ntBASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 RNU6-324P-201ENST00000363957 106 ntBASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 Y_RNA.416-201ENST00000384014 113 ntBASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 RNU6-1248P-201ENST00000391096 64 ntBASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 SNORD58.1-201ENST00000391313 66 ntBASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 RNU6-710P-201ENST00000410424 105 ntBASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 RNA5SP270-201ENST00000411361 118 ntBASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 BTF3P4-201ENST00000418852 495 ntBASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 AC011753.1-201ENST00000451001 220 ntBASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 RNU6-191P-201ENST00000516295 94 ntBASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 RNU6-1271P-201ENST00000517049 105 ntBASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 MIR3169-201ENST00000578032 83 ntBASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 MIR3671-201ENST00000580455 88 ntBASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 MIR5694-201ENST00000581190 76 ntBASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.37□□□□□ -2.03
RAPGEF4Q8WZA2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
RAPGEF4Q8WZA2 Y_RNA.20-201ENST00000362479 113 ntBASIC2.36□□□□□ -2.03
RAPGEF4Q8WZA2 RNU4-80P-201ENST00000363200 141 ntBASIC2.36□□□□□ -2.03
RAPGEF4Q8WZA2 RNA5SP493-201ENST00000364115 91 ntBASIC2.36□□□□□ -2.03
RAPGEF4Q8WZA2 SNORA40.19-201ENST00000390846 128 ntBASIC2.36□□□□□ -2.03
RAPGEF4Q8WZA2 AC091959.1-201ENST00000495857 238 ntBASIC2.36□□□□□ -2.03
RAPGEF4Q8WZA2 AC011406.1-201ENST00000512440 370 ntBASIC2.36□□□□□ -2.03
RAPGEF4Q8WZA2 SNORA27.4-201ENST00000516650 95 ntBASIC2.36□□□□□ -2.03
RAPGEF4Q8WZA2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.36□□□□□ -2.03
RAPGEF4Q8WZA2 MIR3145-201ENST00000580727 82 ntBASIC2.36□□□□□ -2.03
RAPGEF4Q8WZA2 MIR3128-201ENST00000581957 66 ntBASIC2.36□□□□□ -2.03
RAPGEF4Q8WZA2 MIR4781-201ENST00000585250 76 ntBASIC2.36□□□□□ -2.03
RAPGEF4Q8WZA2 AL031274.2-201ENST00000599419 203 ntBASIC2.36□□□□□ -2.03
RAPGEF4Q8WZA2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.36□□□□□ -2.03
RAPGEF4Q8WZA2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.36□□□□□ -2.03
RAPGEF4Q8WZA2 Y_RNA.44-201ENST00000362676 108 ntBASIC2.35□□□□□ -2.03
RAPGEF4Q8WZA2 Y_RNA.489-201ENST00000384410 101 ntBASIC2.35□□□□□ -2.03
RAPGEF4Q8WZA2 AL603910.2-201ENST00000407268 136 ntBASIC2.35□□□□□ -2.03
RAPGEF4Q8WZA2 AC024067.1-201ENST00000426199 223 ntBASIC2.35□□□□□ -2.03
RAPGEF4Q8WZA2 HSPE1P13-201ENST00000451143 297 ntBASIC2.35□□□□□ -2.03
RAPGEF4Q8WZA2 RNU6-1146P-201ENST00000516282 102 ntBASIC2.35□□□□□ -2.03
RAPGEF4Q8WZA2 MIR4255-201ENST00000579351 72 ntBASIC2.35□□□□□ -2.03
RAPGEF4Q8WZA2 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.35□□□□□ -2.03
RAPGEF4Q8WZA2 CENPCP1-201ENST00000533085 2578 ntBASIC2.35□□□□□ -2.03
RAPGEF4Q8WZA2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
RAPGEF4Q8WZA2 RNU1-58P-201ENST00000362413 163 ntBASIC2.34□□□□□ -2.03
RAPGEF4Q8WZA2 snoU2-30.2-201ENST00000362805 70 ntBASIC2.34□□□□□ -2.03
RAPGEF4Q8WZA2 Y_RNA.124-201ENST00000363339 93 ntBASIC2.34□□□□□ -2.03
RAPGEF4Q8WZA2 Y_RNA.275-201ENST00000364726 110 ntBASIC2.34□□□□□ -2.03
RAPGEF4Q8WZA2 RNU6-514P-201ENST00000384208 107 ntBASIC2.34□□□□□ -2.03
RAPGEF4Q8WZA2 SNORA67.5-201ENST00000391036 107 ntBASIC2.34□□□□□ -2.03
RAPGEF4Q8WZA2 RNU4-62P-201ENST00000410125 130 ntBASIC2.34□□□□□ -2.03
RAPGEF4Q8WZA2 RNU6-717P-201ENST00000459076 104 ntBASIC2.34□□□□□ -2.03
RAPGEF4Q8WZA2 RPS26P55-201ENST00000471178 356 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms