Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.85□□□□□ -1.95
NUP43Q8NFH3 RN7SL75P-201ENST00000461926 281 ntBASIC2.85□□□□□ -1.95
NUP43Q8NFH3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.85□□□□□ -1.95
NUP43Q8NFH3 RNU6-991P-201ENST00000516168 107 ntBASIC2.85□□□□□ -1.95
NUP43Q8NFH3 RNU2-60P-201ENST00000517290 128 ntBASIC2.85□□□□□ -1.95
NUP43Q8NFH3 AC131055.1-201ENST00000584626 316 ntBASIC2.85□□□□□ -1.95
NUP43Q8NFH3 MIR6129-201ENST00000616087 109 ntBASIC2.85□□□□□ -1.95
NUP43Q8NFH3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.85□□□□□ -1.95
NUP43Q8NFH3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
NUP43Q8NFH3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.85□□□□□ -1.95
NUP43Q8NFH3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NUP43Q8NFH3 MIR22-201ENST00000362190 85 ntBASIC2.84□□□□□ -1.95
NUP43Q8NFH3 RNU6-1144P-201ENST00000384247 104 ntBASIC2.84□□□□□ -1.95
NUP43Q8NFH3 SNORA40.5-201ENST00000391061 128 ntBASIC2.84□□□□□ -1.95
NUP43Q8NFH3 AC060773.1-201ENST00000421698 310 ntBASIC2.84□□□□□ -1.95
NUP43Q8NFH3 RN7SL633P-201ENST00000488974 297 ntBASIC2.84□□□□□ -1.95
NUP43Q8NFH3 RN7SKP43-201ENST00000516173 320 ntBASIC2.84□□□□□ -1.95
NUP43Q8NFH3 Y_RNA.692-201ENST00000516627 105 ntBASIC2.84□□□□□ -1.95
NUP43Q8NFH3 SNORA48.11-201ENST00000517015 89 ntBASIC2.84□□□□□ -1.95
NUP43Q8NFH3 MIR4325-201ENST00000583049 90 ntBASIC2.84□□□□□ -1.95
NUP43Q8NFH3 AC004832.5-201ENST00000608677 401 ntBASIC2.84□□□□□ -1.95
NUP43Q8NFH3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.84□□□□□ -1.96
NUP43Q8NFH3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
NUP43Q8NFH3 AC093831.2-201ENST00000624393 3427 ntBASIC2.84□□□□□ -1.96
NUP43Q8NFH3 SNORA63.4-201ENST00000362763 126 ntBASIC2.83□□□□□ -1.96
NUP43Q8NFH3 RNU6-1138P-201ENST00000365359 106 ntBASIC2.83□□□□□ -1.96
NUP43Q8NFH3 MLLT10P1-201ENST00000418346 262 ntBASIC2.83□□□□□ -1.96
NUP43Q8NFH3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.83□□□□□ -1.96
NUP43Q8NFH3 AL158147.1-201ENST00000443970 75 ntBASIC2.83□□□□□ -1.96
NUP43Q8NFH3 RPL39P40-201ENST00000445481 146 ntBASIC2.83□□□□□ -1.96
NUP43Q8NFH3 RN7SL504P-201ENST00000494496 287 ntBASIC2.83□□□□□ -1.96
NUP43Q8NFH3 RNU7-149P-201ENST00000516739 59 ntBASIC2.83□□□□□ -1.96
NUP43Q8NFH3 RN7SKP282-201ENST00000516824 299 ntBASIC2.83□□□□□ -1.96
NUP43Q8NFH3 MIR5004-201ENST00000579078 107 ntBASIC2.83□□□□□ -1.96
NUP43Q8NFH3 MIR3121-201ENST00000579680 77 ntBASIC2.83□□□□□ -1.96
NUP43Q8NFH3 AL356280.1-201ENST00000603614 379 ntBASIC2.83□□□□□ -1.96
NUP43Q8NFH3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NUP43Q8NFH3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NUP43Q8NFH3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.83□□□□□ -1.96
NUP43Q8NFH3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.82□□□□□ -1.96
NUP43Q8NFH3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.82□□□□□ -1.96
NUP43Q8NFH3 AC073325.2-201ENST00000339545 159 ntBASIC2.82□□□□□ -1.96
NUP43Q8NFH3 RNU1-96P-201ENST00000364163 162 ntBASIC2.82□□□□□ -1.96
NUP43Q8NFH3 SNORD21-201ENST00000383953 95 ntBASIC2.82□□□□□ -1.96
NUP43Q8NFH3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.82□□□□□ -1.96
NUP43Q8NFH3 AL513477.1-202ENST00000417061 214 ntBASIC2.82□□□□□ -1.96
NUP43Q8NFH3 AC023449.1-201ENST00000454464 154 ntBASIC2.82□□□□□ -1.96
NUP43Q8NFH3 CYP2C59P-201ENST00000457790 269 ntBASIC2.82□□□□□ -1.96
NUP43Q8NFH3 PDCD5P2-201ENST00000507570 312 ntBASIC2.82□□□□□ -1.96
NUP43Q8NFH3 SNORA4.4-201ENST00000515921 135 ntBASIC2.82□□□□□ -1.96
NUP43Q8NFH3 RNU6-1096P-201ENST00000517089 102 ntBASIC2.82□□□□□ -1.96
NUP43Q8NFH3 RNU7-128P-201ENST00000517247 62 ntBASIC2.82□□□□□ -1.96
NUP43Q8NFH3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.82□□□□□ -1.96
NUP43Q8NFH3 AC007318.2-201ENST00000620999 243 ntBASIC2.82□□□□□ -1.96
NUP43Q8NFH3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.82□□□□□ -1.96
NUP43Q8NFH3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
NUP43Q8NFH3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
NUP43Q8NFH3 FAM35CP-201ENST00000554755 2470 ntBASIC2.81□□□□□ -1.96
NUP43Q8NFH3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
NUP43Q8NFH3 Y_RNA.66-201ENST00000362862 102 ntBASIC2.81□□□□□ -1.96
NUP43Q8NFH3 Y_RNA.114-201ENST00000363265 113 ntBASIC2.81□□□□□ -1.96
NUP43Q8NFH3 MIR1253-201ENST00000408273 105 ntBASIC2.81□□□□□ -1.96
NUP43Q8NFH3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.81□□□□□ -1.96
NUP43Q8NFH3 HMGN2P34-201ENST00000437647 269 ntBASIC2.81□□□□□ -1.96
NUP43Q8NFH3 RPS29P21-201ENST00000496272 170 ntBASIC2.81□□□□□ -1.96
NUP43Q8NFH3 OR9P1P-201ENST00000496431 281 ntBASIC2.81□□□□□ -1.96
NUP43Q8NFH3 AC023141.11-201ENST00000508864 202 ntBASIC2.81□□□□□ -1.96
NUP43Q8NFH3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.81□□□□□ -1.96
NUP43Q8NFH3 CYCSP26-201ENST00000534107 320 ntBASIC2.81□□□□□ -1.96
NUP43Q8NFH3 AC073413.2-201ENST00000604332 360 ntBASIC2.81□□□□□ -1.96
NUP43Q8NFH3 Pinc.1-201ENST00000616452 154 ntBASIC2.81□□□□□ -1.96
NUP43Q8NFH3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
NUP43Q8NFH3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.81□□□□□ -1.96
NUP43Q8NFH3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.81□□□□□ -1.96
NUP43Q8NFH3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NUP43Q8NFH3 RNU6-508P-201ENST00000363231 103 ntBASIC2.8□□□□□ -1.96
NUP43Q8NFH3 SNORA71.1-201ENST00000364523 117 ntBASIC2.8□□□□□ -1.96
NUP43Q8NFH3 Y_RNA.486-201ENST00000384398 107 ntBASIC2.8□□□□□ -1.96
NUP43Q8NFH3 MIR520G-201ENST00000385064 90 ntBASIC2.8□□□□□ -1.96
NUP43Q8NFH3 SNORA26-201ENST00000391286 122 ntBASIC2.8□□□□□ -1.96
NUP43Q8NFH3 RN7SKP284-201ENST00000411002 343 ntBASIC2.8□□□□□ -1.96
NUP43Q8NFH3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.8□□□□□ -1.96
NUP43Q8NFH3 NDUFA4P2-201ENST00000489989 244 ntBASIC2.8□□□□□ -1.96
NUP43Q8NFH3 YWHAEP4-201ENST00000505390 198 ntBASIC2.8□□□□□ -1.96
NUP43Q8NFH3 AC008885.1-201ENST00000514930 301 ntBASIC2.8□□□□□ -1.96
NUP43Q8NFH3 RNU6-589P-201ENST00000516485 107 ntBASIC2.8□□□□□ -1.96
NUP43Q8NFH3 Y_RNA.709-201ENST00000516952 92 ntBASIC2.8□□□□□ -1.96
NUP43Q8NFH3 AC007751.1-201ENST00000529260 376 ntBASIC2.8□□□□□ -1.96
NUP43Q8NFH3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.8□□□□□ -1.96
NUP43Q8NFH3 MIR4662B-201ENST00000579498 81 ntBASIC2.8□□□□□ -1.96
NUP43Q8NFH3 AC091178.2-201ENST00000584401 117 ntBASIC2.8□□□□□ -1.96
NUP43Q8NFH3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.8□□□□□ -1.96
NUP43Q8NFH3 AC092435.3-201ENST00000565538 3654 ntBASIC2.8□□□□□ -1.96
NUP43Q8NFH3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
NUP43Q8NFH3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.8□□□□□ -1.96
NUP43Q8NFH3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NUP43Q8NFH3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.8□□□□□ -1.96
NUP43Q8NFH3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.79□□□□□ -1.96
NUP43Q8NFH3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.79□□□□□ -1.96
NUP43Q8NFH3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms