Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SH3RF1Q7Z6J0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.88□□□□□ -1.79
SH3RF1Q7Z6J0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SH3RF1Q7Z6J0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.87□□□□□ -1.79
SH3RF1Q7Z6J0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SH3RF1Q7Z6J0 RPS15AP28-201ENST00000435088 386 ntBASIC3.87□□□□□ -1.79
SH3RF1Q7Z6J0 RNU6-893P-201ENST00000458841 100 ntBASIC3.87□□□□□ -1.79
SH3RF1Q7Z6J0 NDUFA4P2-201ENST00000489989 244 ntBASIC3.87□□□□□ -1.79
SH3RF1Q7Z6J0 RNU6-693P-201ENST00000516134 107 ntBASIC3.87□□□□□ -1.79
SH3RF1Q7Z6J0 RNU6-965P-201ENST00000516721 96 ntBASIC3.87□□□□□ -1.79
SH3RF1Q7Z6J0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.87□□□□□ -1.79
SH3RF1Q7Z6J0 MIR5004-201ENST00000579078 107 ntBASIC3.87□□□□□ -1.79
SH3RF1Q7Z6J0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.87□□□□□ -1.79
SH3RF1Q7Z6J0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SH3RF1Q7Z6J0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SH3RF1Q7Z6J0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SH3RF1Q7Z6J0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SH3RF1Q7Z6J0 Y_RNA.17-201ENST00000362433 111 ntBASIC3.86□□□□□ -1.79
SH3RF1Q7Z6J0 Y_RNA.213-201ENST00000364178 111 ntBASIC3.86□□□□□ -1.79
SH3RF1Q7Z6J0 RN7SKP111-201ENST00000410349 271 ntBASIC3.86□□□□□ -1.79
SH3RF1Q7Z6J0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.86□□□□□ -1.79
SH3RF1Q7Z6J0 AC233266.1-201ENST00000454518 96 ntBASIC3.86□□□□□ -1.79
SH3RF1Q7Z6J0 Y_RNA.714-201ENST00000517065 90 ntBASIC3.86□□□□□ -1.79
SH3RF1Q7Z6J0 AC242852.1-201ENST00000612151 96 ntBASIC3.86□□□□□ -1.79
SH3RF1Q7Z6J0 AC244015.1-201ENST00000622301 99 ntBASIC3.86□□□□□ -1.79
SH3RF1Q7Z6J0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SH3RF1Q7Z6J0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SH3RF1Q7Z6J0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SH3RF1Q7Z6J0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.86□□□□□ -1.79
SH3RF1Q7Z6J0 AP001486.2-201ENST00000561652 5113 ntBASIC3.85□□□□□ -1.79
SH3RF1Q7Z6J0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.85□□□□□ -1.79
SH3RF1Q7Z6J0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SH3RF1Q7Z6J0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.85□□□□□ -1.79
SH3RF1Q7Z6J0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SH3RF1Q7Z6J0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SH3RF1Q7Z6J0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.85□□□□□ -1.79
SH3RF1Q7Z6J0 AC141557.1-201ENST00000540982 400 ntBASIC3.85□□□□□ -1.79
SH3RF1Q7Z6J0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.85□□□□□ -1.79
SH3RF1Q7Z6J0 AC073413.2-201ENST00000604332 360 ntBASIC3.85□□□□□ -1.79
SH3RF1Q7Z6J0 AC022217.4-201ENST00000604389 163 ntBASIC3.85□□□□□ -1.79
SH3RF1Q7Z6J0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SH3RF1Q7Z6J0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SH3RF1Q7Z6J0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SH3RF1Q7Z6J0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.84□□□□□ -1.79
SH3RF1Q7Z6J0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
SH3RF1Q7Z6J0 HMGN2P34-201ENST00000437647 269 ntBASIC3.84□□□□□ -1.79
SH3RF1Q7Z6J0 SNRPGP13-201ENST00000442212 177 ntBASIC3.84□□□□□ -1.79
SH3RF1Q7Z6J0 AC025750.2-201ENST00000442609 450 ntBASIC3.84□□□□□ -1.79
SH3RF1Q7Z6J0 AC022137.1-201ENST00000483735 151 ntBASIC3.84□□□□□ -1.79
SH3RF1Q7Z6J0 RN7SKP282-201ENST00000516824 299 ntBASIC3.84□□□□□ -1.79
SH3RF1Q7Z6J0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.84□□□□□ -1.79
SH3RF1Q7Z6J0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.84□□□□□ -1.79
SH3RF1Q7Z6J0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.84□□□□□ -1.8
SH3RF1Q7Z6J0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
SH3RF1Q7Z6J0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SH3RF1Q7Z6J0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SH3RF1Q7Z6J0 Y_RNA.107-201ENST00000363190 121 ntBASIC3.83□□□□□ -1.8
SH3RF1Q7Z6J0 Y_RNA.253-201ENST00000364562 112 ntBASIC3.83□□□□□ -1.8
SH3RF1Q7Z6J0 MIR802-201ENST00000390235 94 ntBASIC3.83□□□□□ -1.8
SH3RF1Q7Z6J0 AL117342.1-201ENST00000404861 406 ntBASIC3.83□□□□□ -1.8
SH3RF1Q7Z6J0 RNU6-1186P-201ENST00000410429 97 ntBASIC3.83□□□□□ -1.8
SH3RF1Q7Z6J0 RPL39P39-201ENST00000455840 151 ntBASIC3.83□□□□□ -1.8
SH3RF1Q7Z6J0 Y_RNA.666-201ENST00000516187 112 ntBASIC3.83□□□□□ -1.8
SH3RF1Q7Z6J0 RNA5SP367-201ENST00000516557 118 ntBASIC3.83□□□□□ -1.8
SH3RF1Q7Z6J0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.83□□□□□ -1.8
SH3RF1Q7Z6J0 AC084364.2-201ENST00000546924 395 ntBASIC3.83□□□□□ -1.8
SH3RF1Q7Z6J0 AC110741.2-201ENST00000605278 268 ntBASIC3.83□□□□□ -1.8
SH3RF1Q7Z6J0 MIR1248-201ENST00000629190 106 ntBASIC3.83□□□□□ -1.8
SH3RF1Q7Z6J0 AC080128.1-201ENST00000474389 1917 ntBASIC3.83□□□□□ -1.8
SH3RF1Q7Z6J0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SH3RF1Q7Z6J0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.83□□□□□ -1.8
SH3RF1Q7Z6J0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 RNU6-546P-201ENST00000383991 107 ntBASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 RNU6-301P-201ENST00000384277 107 ntBASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 MIR591-201ENST00000385290 95 ntBASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 SNORD77.3-201ENST00000391113 65 ntBASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 RNU6-279P-201ENST00000391297 101 ntBASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 RNU6-240P-201ENST00000516098 97 ntBASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 SCARNA15-202ENST00000516881 127 ntBASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 AC068657.1-201ENST00000520807 306 ntBASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 MIR4672-201ENST00000583126 81 ntBASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 AC008507.4-201ENST00000585464 127 ntBASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 AC087685.1-201ENST00000587507 141 ntBASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 AC091152.2-201ENST00000591628 2569 ntBASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF1Q7Z6J0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.81□□□□□ -1.8
SH3RF1Q7Z6J0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.81□□□□□ -1.8
SH3RF1Q7Z6J0 RNU6-414P-201ENST00000363705 104 ntBASIC3.81□□□□□ -1.8
SH3RF1Q7Z6J0 RNA5SP126-201ENST00000365092 109 ntBASIC3.81□□□□□ -1.8
SH3RF1Q7Z6J0 RNU6-787P-201ENST00000384032 107 ntBASIC3.81□□□□□ -1.8
SH3RF1Q7Z6J0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.81□□□□□ -1.8
SH3RF1Q7Z6J0 RNU6-830P-201ENST00000516353 107 ntBASIC3.81□□□□□ -1.8
SH3RF1Q7Z6J0 RNU6-711P-201ENST00000517255 106 ntBASIC3.81□□□□□ -1.8
SH3RF1Q7Z6J0 MIR4276-201ENST00000584832 70 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms