Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 SNORA70.12-201ENST00000516084 153 ntBASIC2.21□□□□□ -2.06
PPP4R4Q6NUP7 SNORA31.10-201ENST00000516482 106 ntBASIC2.21□□□□□ -2.06
PPP4R4Q6NUP7 AC015720.1-201ENST00000565251 277 ntBASIC2.21□□□□□ -2.06
PPP4R4Q6NUP7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.21□□□□□ -2.06
PPP4R4Q6NUP7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
PPP4R4Q6NUP7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
PPP4R4Q6NUP7 AC018630.2-201ENST00000534866 2403 ntBASIC2.2□□□□□ -2.06
PPP4R4Q6NUP7 RNU6-238P-201ENST00000363313 106 ntBASIC2.2□□□□□ -2.06
PPP4R4Q6NUP7 Y_RNA.376-201ENST00000365638 108 ntBASIC2.2□□□□□ -2.06
PPP4R4Q6NUP7 MT-TW-201ENST00000387382 68 ntBASIC2.2□□□□□ -2.06
PPP4R4Q6NUP7 RNA5SP511-201ENST00000410487 115 ntBASIC2.2□□□□□ -2.06
PPP4R4Q6NUP7 RNU6-1203P-201ENST00000410703 110 ntBASIC2.2□□□□□ -2.06
PPP4R4Q6NUP7 RNU2-40P-201ENST00000410833 196 ntBASIC2.2□□□□□ -2.06
PPP4R4Q6NUP7 AC091021.1-201ENST00000468051 388 ntBASIC2.2□□□□□ -2.06
PPP4R4Q6NUP7 AL161670.1-201ENST00000554348 137 ntBASIC2.2□□□□□ -2.06
PPP4R4Q6NUP7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.2□□□□□ -2.06
PPP4R4Q6NUP7 AP001282.2-201ENST00000616149 309 ntBASIC2.2□□□□□ -2.06
PPP4R4Q6NUP7 MIR8062-201ENST00000621515 85 ntBASIC2.2□□□□□ -2.06
PPP4R4Q6NUP7 MIR6079-201ENST00000635807 62 ntBASIC2.2□□□□□ -2.06
PPP4R4Q6NUP7 AP000553.5-201ENST00000641933 54 ntBASIC2.2□□□□□ -2.06
PPP4R4Q6NUP7 AC016717.2-201ENST00000609089 5141 ntBASIC2.19□□□□□ -2.06
PPP4R4Q6NUP7 Y_RNA.310-201ENST00000365063 113 ntBASIC2.19□□□□□ -2.06
PPP4R4Q6NUP7 SNORA67.3-201ENST00000384366 140 ntBASIC2.19□□□□□ -2.06
PPP4R4Q6NUP7 AL359511.1-201ENST00000402970 211 ntBASIC2.19□□□□□ -2.06
PPP4R4Q6NUP7 MTCO1P5-201ENST00000433573 344 ntBASIC2.19□□□□□ -2.06
PPP4R4Q6NUP7 HMGN2P23-201ENST00000456759 269 ntBASIC2.19□□□□□ -2.06
PPP4R4Q6NUP7 RPL36AP21-201ENST00000490372 323 ntBASIC2.19□□□□□ -2.06
PPP4R4Q6NUP7 AC234781.5-201ENST00000508429 271 ntBASIC2.19□□□□□ -2.06
PPP4R4Q6NUP7 RNU6-1278P-201ENST00000516130 107 ntBASIC2.19□□□□□ -2.06
PPP4R4Q6NUP7 RNU6-191P-201ENST00000516295 94 ntBASIC2.19□□□□□ -2.06
PPP4R4Q6NUP7 RNA5SP24-201ENST00000516478 95 ntBASIC2.19□□□□□ -2.06
PPP4R4Q6NUP7 SNORA44.1-201ENST00000517031 108 ntBASIC2.19□□□□□ -2.06
PPP4R4Q6NUP7 RNU6-570P-201ENST00000517051 105 ntBASIC2.19□□□□□ -2.06
PPP4R4Q6NUP7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PPP4R4Q6NUP7 Y_RNA.47-201ENST00000362697 108 ntBASIC2.18□□□□□ -2.06
PPP4R4Q6NUP7 Y_RNA.368-201ENST00000365547 113 ntBASIC2.18□□□□□ -2.06
PPP4R4Q6NUP7 Y_RNA.518-201ENST00000384552 113 ntBASIC2.18□□□□□ -2.06
PPP4R4Q6NUP7 Y_RNA.569-201ENST00000384749 103 ntBASIC2.18□□□□□ -2.06
PPP4R4Q6NUP7 MIR30A-201ENST00000385092 71 ntBASIC2.18□□□□□ -2.06
PPP4R4Q6NUP7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PPP4R4Q6NUP7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.18□□□□□ -2.06
PPP4R4Q6NUP7 MTCYBP9-201ENST00000431021 303 ntBASIC2.18□□□□□ -2.06
PPP4R4Q6NUP7 AL162725.1-201ENST00000435405 301 ntBASIC2.18□□□□□ -2.06
PPP4R4Q6NUP7 HSPE1P21-201ENST00000438283 308 ntBASIC2.18□□□□□ -2.06
PPP4R4Q6NUP7 RPS20P10-201ENST00000451209 253 ntBASIC2.18□□□□□ -2.06
PPP4R4Q6NUP7 MTCO2P24-201ENST00000515611 426 ntBASIC2.18□□□□□ -2.06
PPP4R4Q6NUP7 MIR3198-2-201ENST00000577868 80 ntBASIC2.18□□□□□ -2.06
PPP4R4Q6NUP7 AC002984.1-201ENST00000591692 448 ntBASIC2.18□□□□□ -2.06
PPP4R4Q6NUP7 MIR8074-201ENST00000615081 81 ntBASIC2.18□□□□□ -2.06
PPP4R4Q6NUP7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PPP4R4Q6NUP7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
PPP4R4Q6NUP7 Y_RNA.483-201ENST00000384380 101 ntBASIC2.17□□□□□ -2.06
PPP4R4Q6NUP7 RNU6-376P-201ENST00000384731 106 ntBASIC2.17□□□□□ -2.06
PPP4R4Q6NUP7 RNU6-855P-201ENST00000410395 104 ntBASIC2.17□□□□□ -2.06
PPP4R4Q6NUP7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.17□□□□□ -2.06
PPP4R4Q6NUP7 OOSP1P1-201ENST00000423265 274 ntBASIC2.17□□□□□ -2.06
PPP4R4Q6NUP7 FTH1P12-201ENST00000432137 551 ntBASIC2.17□□□□□ -2.06
PPP4R4Q6NUP7 RPS15AP28-201ENST00000435088 386 ntBASIC2.17□□□□□ -2.06
PPP4R4Q6NUP7 RPS4XP11-201ENST00000446897 772 ntBASIC2.17□□□□□ -2.06
PPP4R4Q6NUP7 AC008834.1-201ENST00000511612 175 ntBASIC2.17□□□□□ -2.06
PPP4R4Q6NUP7 MIR3945-201ENST00000581853 98 ntBASIC2.17□□□□□ -2.06
PPP4R4Q6NUP7 AC104984.5-201ENST00000586878 94 ntBASIC2.17□□□□□ -2.06
PPP4R4Q6NUP7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PPP4R4Q6NUP7 RNA5SP289-201ENST00000362332 137 ntBASIC2.16□□□□□ -2.06
PPP4R4Q6NUP7 Y_RNA.396-201ENST00000383949 103 ntBASIC2.16□□□□□ -2.06
PPP4R4Q6NUP7 RNU6-136P-201ENST00000384663 107 ntBASIC2.16□□□□□ -2.06
PPP4R4Q6NUP7 MIR518C-201ENST00000384822 101 ntBASIC2.16□□□□□ -2.06
PPP4R4Q6NUP7 snoU13.27-201ENST00000459278 104 ntBASIC2.16□□□□□ -2.06
PPP4R4Q6NUP7 RNU6-1338P-201ENST00000516328 91 ntBASIC2.16□□□□□ -2.06
PPP4R4Q6NUP7 RPL21P9-201ENST00000556149 474 ntBASIC2.16□□□□□ -2.06
PPP4R4Q6NUP7 MIR4448-201ENST00000584360 86 ntBASIC2.16□□□□□ -2.06
PPP4R4Q6NUP7 CTSLP2-204ENST00000629029 392 ntBASIC2.16□□□□□ -2.06
PPP4R4Q6NUP7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
PPP4R4Q6NUP7 RNU6-414P-201ENST00000363705 104 ntBASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 Y_RNA.176-201ENST00000363815 109 ntBASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 RNU6-326P-201ENST00000365480 107 ntBASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 RNU6-710P-201ENST00000410424 105 ntBASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 RNA5SP489-201ENST00000410986 109 ntBASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 AC010154.1-201ENST00000425857 269 ntBASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 AC245047.3-201ENST00000429428 127 ntBASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 JTBP1-201ENST00000441314 247 ntBASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 TRBVB-201ENST00000477100 408 ntBASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 AC099513.1-201ENST00000490423 301 ntBASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 AC026436.1-201ENST00000510537 270 ntBASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 RNU6-341P-201ENST00000516973 96 ntBASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 SNORA77B-201ENST00000578179 125 ntBASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 MIR8054-201ENST00000620877 86 ntBASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 MIR6873-201ENST00000622788 63 ntBASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 MIR1291-201ENST00000627649 87 ntBASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
PPP4R4Q6NUP7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PPP4R4Q6NUP7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PPP4R4Q6NUP7 RNU6-801P-201ENST00000364087 105 ntBASIC2.14□□□□□ -2.07
PPP4R4Q6NUP7 Y_RNA.456-201ENST00000384232 111 ntBASIC2.14□□□□□ -2.07
PPP4R4Q6NUP7 Y_RNA.461-201ENST00000384263 103 ntBASIC2.14□□□□□ -2.07
PPP4R4Q6NUP7 RNU6-713P-201ENST00000384761 107 ntBASIC2.14□□□□□ -2.07
PPP4R4Q6NUP7 MTND3P2-201ENST00000438452 342 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms