Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RNF20Q5VTR2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
RNF20Q5VTR2 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF20Q5VTR2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF20Q5VTR2 RNA5SP72-201ENST00000364442 117 ntBASIC3.74□□□□□ -1.81
RNF20Q5VTR2 SNORD61-201ENST00000384252 73 ntBASIC3.74□□□□□ -1.81
RNF20Q5VTR2 Y_RNA.528-201ENST00000384575 108 ntBASIC3.74□□□□□ -1.81
RNF20Q5VTR2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.74□□□□□ -1.81
RNF20Q5VTR2 RNY4P30-201ENST00000410216 95 ntBASIC3.74□□□□□ -1.81
RNF20Q5VTR2 AC005326.1-201ENST00000429197 123 ntBASIC3.74□□□□□ -1.81
RNF20Q5VTR2 AC018634.1-201ENST00000437554 401 ntBASIC3.74□□□□□ -1.81
RNF20Q5VTR2 AL161788.1-201ENST00000441805 169 ntBASIC3.74□□□□□ -1.81
RNF20Q5VTR2 RN7SL601P-201ENST00000471221 293 ntBASIC3.74□□□□□ -1.81
RNF20Q5VTR2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.74□□□□□ -1.81
RNF20Q5VTR2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF20Q5VTR2 MIR4444-1-201ENST00000581696 74 ntBASIC3.74□□□□□ -1.81
RNF20Q5VTR2 MIR4444-2-201ENST00000584390 74 ntBASIC3.74□□□□□ -1.81
RNF20Q5VTR2 MIR6075-201ENST00000620782 95 ntBASIC3.74□□□□□ -1.81
RNF20Q5VTR2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF20Q5VTR2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF20Q5VTR2 SNORA71.3-201ENST00000362582 128 ntBASIC3.73□□□□□ -1.81
RNF20Q5VTR2 SNORD15B-201ENST00000384714 146 ntBASIC3.73□□□□□ -1.81
RNF20Q5VTR2 MIR520G-201ENST00000385064 90 ntBASIC3.73□□□□□ -1.81
RNF20Q5VTR2 SNORD72-201ENST00000390994 80 ntBASIC3.73□□□□□ -1.81
RNF20Q5VTR2 SNORA48.7-201ENST00000391302 135 ntBASIC3.73□□□□□ -1.81
RNF20Q5VTR2 AC123900.1-201ENST00000420390 96 ntBASIC3.73□□□□□ -1.81
RNF20Q5VTR2 AC060773.1-201ENST00000421698 310 ntBASIC3.73□□□□□ -1.81
RNF20Q5VTR2 SNRPGP10-201ENST00000432323 225 ntBASIC3.73□□□□□ -1.81
RNF20Q5VTR2 RN7SL863P-201ENST00000462370 296 ntBASIC3.73□□□□□ -1.81
RNF20Q5VTR2 RPS29P24-201ENST00000486345 171 ntBASIC3.73□□□□□ -1.81
RNF20Q5VTR2 CKS1BP2-201ENST00000497342 240 ntBASIC3.73□□□□□ -1.81
RNF20Q5VTR2 AC093259.1-201ENST00000509755 300 ntBASIC3.73□□□□□ -1.81
RNF20Q5VTR2 Y_RNA.677-201ENST00000516401 85 ntBASIC3.73□□□□□ -1.81
RNF20Q5VTR2 RNU6-1291P-201ENST00000516591 104 ntBASIC3.73□□□□□ -1.81
RNF20Q5VTR2 SCARNA3-201ENST00000517097 143 ntBASIC3.73□□□□□ -1.81
RNF20Q5VTR2 AC012314.7-201ENST00000619693 93 ntBASIC3.73□□□□□ -1.81
RNF20Q5VTR2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF20Q5VTR2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
RNF20Q5VTR2 RNU1-23P-201ENST00000363361 144 ntBASIC3.72□□□□□ -1.81
RNF20Q5VTR2 SNORA7.4-201ENST00000384249 137 ntBASIC3.72□□□□□ -1.81
RNF20Q5VTR2 FO393413.1-201ENST00000402892 195 ntBASIC3.72□□□□□ -1.81
RNF20Q5VTR2 PRSS3P4-201ENST00000453323 162 ntBASIC3.72□□□□□ -1.81
RNF20Q5VTR2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.72□□□□□ -1.81
RNF20Q5VTR2 HMGN1P7-201ENST00000491722 313 ntBASIC3.72□□□□□ -1.81
RNF20Q5VTR2 RNA5SP236-201ENST00000516169 116 ntBASIC3.72□□□□□ -1.81
RNF20Q5VTR2 Y_RNA.666-201ENST00000516187 112 ntBASIC3.72□□□□□ -1.81
RNF20Q5VTR2 RNU6-856P-201ENST00000516959 98 ntBASIC3.72□□□□□ -1.81
RNF20Q5VTR2 MIR5680-201ENST00000577577 84 ntBASIC3.72□□□□□ -1.81
RNF20Q5VTR2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.72□□□□□ -1.81
RNF20Q5VTR2 MIR5739-201ENST00000619803 80 ntBASIC3.72□□□□□ -1.81
RNF20Q5VTR2 MIR622-201ENST00000638396 96 ntBASIC3.72□□□□□ -1.81
RNF20Q5VTR2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
RNF20Q5VTR2 RNA5SP125-201ENST00000364843 120 ntBASIC3.71□□□□□ -1.82
RNF20Q5VTR2 RNU6-106P-201ENST00000384405 107 ntBASIC3.71□□□□□ -1.82
RNF20Q5VTR2 SNORA46-201ENST00000384762 135 ntBASIC3.71□□□□□ -1.82
RNF20Q5VTR2 MIR670-201ENST00000390142 98 ntBASIC3.71□□□□□ -1.82
RNF20Q5VTR2 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF20Q5VTR2 RNA5SP385-201ENST00000515947 110 ntBASIC3.71□□□□□ -1.82
RNF20Q5VTR2 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNF20Q5VTR2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RNF20Q5VTR2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RNF20Q5VTR2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNF20Q5VTR2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
RNF20Q5VTR2 MAPK10-362ENST00000641864 4484 ntBASIC3.71□□□□□ -1.82
RNF20Q5VTR2 MAPK10-322ENST00000641485 4530 ntBASIC3.71□□□□□ -1.82
RNF20Q5VTR2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.71□□□□□ -1.82
RNF20Q5VTR2 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RNF20Q5VTR2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RNF20Q5VTR2 Y_RNA.253-201ENST00000364562 112 ntBASIC3.7□□□□□ -1.82
RNF20Q5VTR2 AL031121.1-201ENST00000406553 254 ntBASIC3.7□□□□□ -1.82
RNF20Q5VTR2 RNA5SP120-201ENST00000410900 112 ntBASIC3.7□□□□□ -1.82
RNF20Q5VTR2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.7□□□□□ -1.82
RNF20Q5VTR2 CALM2P4-201ENST00000430810 426 ntBASIC3.7□□□□□ -1.82
RNF20Q5VTR2 UQCRHP3-201ENST00000451503 251 ntBASIC3.7□□□□□ -1.82
RNF20Q5VTR2 RNU6-1149P-201ENST00000516810 97 ntBASIC3.7□□□□□ -1.82
RNF20Q5VTR2 AC022217.4-201ENST00000604389 163 ntBASIC3.7□□□□□ -1.82
RNF20Q5VTR2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF20Q5VTR2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF20Q5VTR2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RNF20Q5VTR2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF20Q5VTR2 MIR340-201ENST00000362125 95 ntBASIC3.69□□□□□ -1.82
RNF20Q5VTR2 RNU1-96P-201ENST00000364163 162 ntBASIC3.69□□□□□ -1.82
RNF20Q5VTR2 Y_RNA.267-201ENST00000364679 109 ntBASIC3.69□□□□□ -1.82
RNF20Q5VTR2 Y_RNA.332-201ENST00000365271 113 ntBASIC3.69□□□□□ -1.82
RNF20Q5VTR2 RNU6-554P-201ENST00000410466 106 ntBASIC3.69□□□□□ -1.82
RNF20Q5VTR2 RNA5SP274-201ENST00000410484 108 ntBASIC3.69□□□□□ -1.82
RNF20Q5VTR2 AC007064.1-201ENST00000412238 351 ntBASIC3.69□□□□□ -1.82
RNF20Q5VTR2 RPS15AP28-201ENST00000435088 386 ntBASIC3.69□□□□□ -1.82
RNF20Q5VTR2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.69□□□□□ -1.82
RNF20Q5VTR2 RNU6-693P-201ENST00000516134 107 ntBASIC3.69□□□□□ -1.82
RNF20Q5VTR2 RNU6-412P-201ENST00000516434 106 ntBASIC3.69□□□□□ -1.82
RNF20Q5VTR2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
RNF20Q5VTR2 AC093831.2-201ENST00000624393 3427 ntBASIC3.68□□□□□ -1.82
RNF20Q5VTR2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
RNF20Q5VTR2 RNU6-1107P-201ENST00000364817 104 ntBASIC3.68□□□□□ -1.82
RNF20Q5VTR2 RNU6-1292P-201ENST00000383856 107 ntBASIC3.68□□□□□ -1.82
RNF20Q5VTR2 RNA5SP171-201ENST00000391071 115 ntBASIC3.68□□□□□ -1.82
RNF20Q5VTR2 RNA5SP467-201ENST00000391274 118 ntBASIC3.68□□□□□ -1.82
RNF20Q5VTR2 RN7SKP123-201ENST00000410732 291 ntBASIC3.68□□□□□ -1.82
RNF20Q5VTR2 MICF-203ENST00000432679 129 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms