Protein–RNA interactions for Protein: Q15270

NKX1-1, NK1 transcription factor-related protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-1Q15270 AL449363.1-201ENST00000617815 186 ntBASIC4.49□□□□□ -1.69
NKX1-1Q15270 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX1-1Q15270 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX1-1Q15270 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NKX1-1Q15270 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX1-1Q15270 MIR592-201ENST00000384959 97 ntBASIC4.48□□□□□ -1.69
NKX1-1Q15270 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX1-1Q15270 RNU7-164P-201ENST00000459221 62 ntBASIC4.48□□□□□ -1.69
NKX1-1Q15270 AC021205.2-201ENST00000480069 347 ntBASIC4.48□□□□□ -1.69
NKX1-1Q15270 RNU7-25P-201ENST00000516544 62 ntBASIC4.48□□□□□ -1.69
NKX1-1Q15270 AC084364.2-201ENST00000546924 395 ntBASIC4.48□□□□□ -1.69
NKX1-1Q15270 MIR376A2-201ENST00000636782 80 ntBASIC4.48□□□□□ -1.69
NKX1-1Q15270 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX1-1Q15270 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX1-1Q15270 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX1-1Q15270 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
NKX1-1Q15270 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX1-1Q15270 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NKX1-1Q15270 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
NKX1-1Q15270 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NKX1-1Q15270 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.47□□□□□ -1.69
NKX1-1Q15270 RNU6-268P-201ENST00000364174 107 ntBASIC4.47□□□□□ -1.69
NKX1-1Q15270 RPL21P3-201ENST00000395517 478 ntBASIC4.47□□□□□ -1.69
NKX1-1Q15270 AL627390.1-201ENST00000396055 340 ntBASIC4.47□□□□□ -1.69
NKX1-1Q15270 SNORA18.7-201ENST00000516910 131 ntBASIC4.47□□□□□ -1.69
NKX1-1Q15270 SUMO2P16-201ENST00000519475 264 ntBASIC4.47□□□□□ -1.69
NKX1-1Q15270 MIR3683-201ENST00000580847 82 ntBASIC4.47□□□□□ -1.69
NKX1-1Q15270 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.47□□□□□ -1.69
NKX1-1Q15270 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX1-1Q15270 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX1-1Q15270 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
NKX1-1Q15270 SNORD74.4-201ENST00000364129 80 ntBASIC4.46□□□□□ -1.7
NKX1-1Q15270 SNORA51.10-201ENST00000384418 136 ntBASIC4.46□□□□□ -1.7
NKX1-1Q15270 Y_RNA.547-201ENST00000384654 119 ntBASIC4.46□□□□□ -1.7
NKX1-1Q15270 RNU4-47P-201ENST00000410876 114 ntBASIC4.46□□□□□ -1.7
NKX1-1Q15270 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX1-1Q15270 SNORD45.4-201ENST00000516629 73 ntBASIC4.46□□□□□ -1.7
NKX1-1Q15270 MIR4276-201ENST00000584832 70 ntBASIC4.46□□□□□ -1.7
NKX1-1Q15270 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NKX1-1Q15270 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX1-1Q15270 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX1-1Q15270 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX1-1Q15270 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX1-1Q15270 Y_RNA.351-201ENST00000365436 96 ntBASIC4.45□□□□□ -1.7
NKX1-1Q15270 Y_RNA.440-201ENST00000384120 114 ntBASIC4.45□□□□□ -1.7
NKX1-1Q15270 MIR548D2-201ENST00000384955 97 ntBASIC4.45□□□□□ -1.7
NKX1-1Q15270 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NKX1-1Q15270 RNY4P29-201ENST00000410801 97 ntBASIC4.45□□□□□ -1.7
NKX1-1Q15270 AC003685.2-201ENST00000422795 395 ntBASIC4.45□□□□□ -1.7
NKX1-1Q15270 RPS29P31-201ENST00000446147 164 ntBASIC4.45□□□□□ -1.7
NKX1-1Q15270 SNORA70.14-201ENST00000516205 110 ntBASIC4.45□□□□□ -1.7
NKX1-1Q15270 EIF4BP1-201ENST00000554881 351 ntBASIC4.45□□□□□ -1.7
NKX1-1Q15270 AC110741.2-201ENST00000605278 268 ntBASIC4.45□□□□□ -1.7
NKX1-1Q15270 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.45□□□□□ -1.7
NKX1-1Q15270 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX1-1Q15270 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.44□□□□□ -1.7
NKX1-1Q15270 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.44□□□□□ -1.7
NKX1-1Q15270 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NKX1-1Q15270 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX1-1Q15270 SNORA25B-201ENST00000365507 128 ntBASIC4.44□□□□□ -1.7
NKX1-1Q15270 MIR1912-201ENST00000410389 80 ntBASIC4.44□□□□□ -1.7
NKX1-1Q15270 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX1-1Q15270 RN7SL297P-201ENST00000483161 293 ntBASIC4.44□□□□□ -1.7
NKX1-1Q15270 AL163195.1-201ENST00000496941 348 ntBASIC4.44□□□□□ -1.7
NKX1-1Q15270 AC025445.1-201ENST00000502728 300 ntBASIC4.44□□□□□ -1.7
NKX1-1Q15270 AP003484.1-201ENST00000530974 250 ntBASIC4.44□□□□□ -1.7
NKX1-1Q15270 AC026333.2-201ENST00000542164 106 ntBASIC4.44□□□□□ -1.7
NKX1-1Q15270 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX1-1Q15270 SCARNA15.3-201ENST00000626315 122 ntBASIC4.44□□□□□ -1.7
NKX1-1Q15270 SCARNA4.1-201ENST00000628597 123 ntBASIC4.44□□□□□ -1.7
NKX1-1Q15270 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
NKX1-1Q15270 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NKX1-1Q15270 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NKX1-1Q15270 SNORA80E-201ENST00000384744 137 ntBASIC4.43□□□□□ -1.7
NKX1-1Q15270 SNORA11.4-201ENST00000408823 129 ntBASIC4.43□□□□□ -1.7
NKX1-1Q15270 RPS26P15-201ENST00000488067 348 ntBASIC4.43□□□□□ -1.7
NKX1-1Q15270 MIR4305-201ENST00000583252 102 ntBASIC4.43□□□□□ -1.7
NKX1-1Q15270 MIR4298-201ENST00000584380 73 ntBASIC4.43□□□□□ -1.7
NKX1-1Q15270 XIST_intron.1-201ENST00000619444 68 ntBASIC4.43□□□□□ -1.7
NKX1-1Q15270 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NKX1-1Q15270 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NKX1-1Q15270 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NKX1-1Q15270 RNA5SP322-201ENST00000363617 119 ntBASIC4.42□□□□□ -1.7
NKX1-1Q15270 Y_RNA.265-201ENST00000364677 108 ntBASIC4.42□□□□□ -1.7
NKX1-1Q15270 SNORD38C-201ENST00000384381 69 ntBASIC4.42□□□□□ -1.7
NKX1-1Q15270 Y_RNA.510-201ENST00000384511 114 ntBASIC4.42□□□□□ -1.7
NKX1-1Q15270 MIR1289-1-201ENST00000408836 144 ntBASIC4.42□□□□□ -1.7
NKX1-1Q15270 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX1-1Q15270 RNU6-830P-201ENST00000516353 107 ntBASIC4.42□□□□□ -1.7
NKX1-1Q15270 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NKX1-1Q15270 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.42□□□□□ -1.7
NKX1-1Q15270 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
NKX1-1Q15270 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
NKX1-1Q15270 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NKX1-1Q15270 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NKX1-1Q15270 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NKX1-1Q15270 MIR590-201ENST00000385008 97 ntBASIC4.41□□□□□ -1.7
NKX1-1Q15270 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NKX1-1Q15270 AL162726.3-218ENST00000636401 95 ntBASIC4.41□□□□□ -1.7
NKX1-1Q15270 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms