Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.56□□□□□ -1.68
ATN1P54259 U6.108-201ENST00000637764 58 ntBASIC4.56□□□□□ -1.68
ATN1P54259 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
ATN1P54259 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
ATN1P54259 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
ATN1P54259 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATN1P54259 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
ATN1P54259 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATN1P54259 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATN1P54259 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATN1P54259 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.55□□□□□ -1.68
ATN1P54259 SNORD66.1-201ENST00000391230 76 ntBASIC4.55□□□□□ -1.68
ATN1P54259 Y_RNA.596-201ENST00000410462 109 ntBASIC4.55□□□□□ -1.68
ATN1P54259 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.55□□□□□ -1.68
ATN1P54259 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.55□□□□□ -1.68
ATN1P54259 RNU6-826P-201ENST00000516827 104 ntBASIC4.55□□□□□ -1.68
ATN1P54259 MIR6868-201ENST00000611215 58 ntBASIC4.55□□□□□ -1.68
ATN1P54259 MIR1248-201ENST00000629190 106 ntBASIC4.55□□□□□ -1.68
ATN1P54259 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATN1P54259 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
ATN1P54259 AC011266.1-201ENST00000624119 3569 ntBASIC4.55□□□□□ -1.68
ATN1P54259 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATN1P54259 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATN1P54259 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATN1P54259 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ATN1P54259 RNU6-865P-201ENST00000364772 107 ntBASIC4.54□□□□□ -1.68
ATN1P54259 AC123900.1-201ENST00000420390 96 ntBASIC4.54□□□□□ -1.68
ATN1P54259 AC244636.1-201ENST00000421152 228 ntBASIC4.54□□□□□ -1.68
ATN1P54259 SNORA59A-201ENST00000459326 152 ntBASIC4.54□□□□□ -1.68
ATN1P54259 AC025445.1-201ENST00000502728 300 ntBASIC4.54□□□□□ -1.68
ATN1P54259 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.54□□□□□ -1.68
ATN1P54259 AC012676.2-201ENST00000619258 186 ntBASIC4.54□□□□□ -1.68
ATN1P54259 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.54□□□□□ -1.68
ATN1P54259 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATN1P54259 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
ATN1P54259 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.54□□□□□ -1.68
ATN1P54259 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ATN1P54259 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ATN1P54259 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.53□□□□□ -1.68
ATN1P54259 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
ATN1P54259 RNU6-205P-201ENST00000390858 107 ntBASIC4.53□□□□□ -1.68
ATN1P54259 AC234781.5-201ENST00000508429 271 ntBASIC4.53□□□□□ -1.68
ATN1P54259 RNU6-1108P-201ENST00000516308 104 ntBASIC4.53□□□□□ -1.68
ATN1P54259 MIR4796-201ENST00000580742 81 ntBASIC4.53□□□□□ -1.68
ATN1P54259 FAM106DP-201ENST00000586416 501 ntBASIC4.53□□□□□ -1.68
ATN1P54259 SNORA25.6-201ENST00000364121 118 ntBASIC4.52□□□□□ -1.69
ATN1P54259 Y_RNA.508-201ENST00000384502 114 ntBASIC4.52□□□□□ -1.69
ATN1P54259 SNORA26.6-201ENST00000391256 115 ntBASIC4.52□□□□□ -1.69
ATN1P54259 RPS26P2-201ENST00000440331 348 ntBASIC4.52□□□□□ -1.69
ATN1P54259 CYCSP30-201ENST00000546447 172 ntBASIC4.52□□□□□ -1.69
ATN1P54259 DNAJC19P9-201ENST00000555084 351 ntBASIC4.52□□□□□ -1.69
ATN1P54259 AC005520.4-201ENST00000604337 90 ntBASIC4.52□□□□□ -1.69
ATN1P54259 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.52□□□□□ -1.69
ATN1P54259 AC092435.4-201ENST00000623012 4159 ntBASIC4.52□□□□□ -1.69
ATN1P54259 DHX9P1-201ENST00000436565 3076 ntBASIC4.52□□□□□ -1.69
ATN1P54259 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATN1P54259 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATN1P54259 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATN1P54259 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATN1P54259 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.51□□□□□ -1.69
ATN1P54259 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATN1P54259 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.51□□□□□ -1.69
ATN1P54259 RNA5SP133-201ENST00000363368 119 ntBASIC4.51□□□□□ -1.69
ATN1P54259 RNA5SP138-201ENST00000365098 114 ntBASIC4.51□□□□□ -1.69
ATN1P54259 RNU6-424P-201ENST00000384367 105 ntBASIC4.51□□□□□ -1.69
ATN1P54259 MIR3074-201ENST00000384885 81 ntBASIC4.51□□□□□ -1.69
ATN1P54259 MIR1267-201ENST00000408723 78 ntBASIC4.51□□□□□ -1.69
ATN1P54259 RPS29P4-201ENST00000414733 161 ntBASIC4.51□□□□□ -1.69
ATN1P54259 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.51□□□□□ -1.69
ATN1P54259 AC108751.2-201ENST00000469993 231 ntBASIC4.51□□□□□ -1.69
ATN1P54259 RNU6-586P-201ENST00000517265 104 ntBASIC4.51□□□□□ -1.69
ATN1P54259 MIR5684-201ENST00000585074 65 ntBASIC4.51□□□□□ -1.69
ATN1P54259 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATN1P54259 AL138721.1-201ENST00000616756 179 ntBASIC4.51□□□□□ -1.69
ATN1P54259 CTSLP2-204ENST00000629029 392 ntBASIC4.51□□□□□ -1.69
ATN1P54259 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
ATN1P54259 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATN1P54259 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATN1P54259 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.5□□□□□ -1.69
ATN1P54259 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATN1P54259 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.5□□□□□ -1.69
ATN1P54259 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATN1P54259 SNORA2B-201ENST00000384583 137 ntBASIC4.5□□□□□ -1.69
ATN1P54259 MIR635-201ENST00000384830 98 ntBASIC4.5□□□□□ -1.69
ATN1P54259 MIR183-201ENST00000384958 110 ntBASIC4.5□□□□□ -1.69
ATN1P54259 RNA5SP482-201ENST00000391269 118 ntBASIC4.5□□□□□ -1.69
ATN1P54259 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.5□□□□□ -1.69
ATN1P54259 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.5□□□□□ -1.69
ATN1P54259 RNU6-965P-201ENST00000516721 96 ntBASIC4.5□□□□□ -1.69
ATN1P54259 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.5□□□□□ -1.69
ATN1P54259 MTND5P40-201ENST00000559945 246 ntBASIC4.5□□□□□ -1.69
ATN1P54259 uc_338.25-201ENST00000613756 156 ntBASIC4.5□□□□□ -1.69
ATN1P54259 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATN1P54259 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATN1P54259 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATN1P54259 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ATN1P54259 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATN1P54259 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATN1P54259 SNORA60-201ENST00000362396 134 ntBASIC4.49□□□□□ -1.69
ATN1P54259 RNA5SP72-201ENST00000364442 117 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms