Protein–RNA interactions for Protein: P48436

SOX9, Transcription factor SOX-9, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9P48436 AC023449.1-201ENST00000454464 154 ntBASIC2.93□□□□□ -1.94
SOX9P48436 AC091021.1-201ENST00000468051 388 ntBASIC2.93□□□□□ -1.94
SOX9P48436 MIR2681-201ENST00000581814 105 ntBASIC2.93□□□□□ -1.94
SOX9P48436 AL391903.3-201ENST00000612158 163 ntBASIC2.93□□□□□ -1.94
SOX9P48436 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.93□□□□□ -1.94
SOX9P48436 AC096644.4-201ENST00000563417 2912 ntBASIC2.92□□□□□ -1.94
SOX9P48436 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SOX9P48436 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SOX9P48436 AC068700.1-201ENST00000565862 3754 ntBASIC2.92□□□□□ -1.94
SOX9P48436 AC131280.1-202ENST00000624067 4211 ntBASIC2.92□□□□□ -1.94
SOX9P48436 RNU1-58P-201ENST00000362413 163 ntBASIC2.92□□□□□ -1.94
SOX9P48436 Y_RNA.23-201ENST00000362496 106 ntBASIC2.92□□□□□ -1.94
SOX9P48436 RNU6-674P-201ENST00000363831 107 ntBASIC2.92□□□□□ -1.94
SOX9P48436 Y_RNA.229-201ENST00000364347 113 ntBASIC2.92□□□□□ -1.94
SOX9P48436 RNU1-112P-201ENST00000364401 164 ntBASIC2.92□□□□□ -1.94
SOX9P48436 RNU6-1164P-201ENST00000364428 107 ntBASIC2.92□□□□□ -1.94
SOX9P48436 Y_RNA.412-201ENST00000384001 104 ntBASIC2.92□□□□□ -1.94
SOX9P48436 SNORA8-201ENST00000384574 139 ntBASIC2.92□□□□□ -1.94
SOX9P48436 Y_RNA.572-201ENST00000384757 98 ntBASIC2.92□□□□□ -1.94
SOX9P48436 MIR562-201ENST00000384894 95 ntBASIC2.92□□□□□ -1.94
SOX9P48436 RNA5SP137-201ENST00000516833 135 ntBASIC2.92□□□□□ -1.94
SOX9P48436 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.92□□□□□ -1.94
SOX9P48436 AC024995.1-201ENST00000523014 93 ntBASIC2.92□□□□□ -1.94
SOX9P48436 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.92□□□□□ -1.94
SOX9P48436 AC011604.1-201ENST00000545978 196 ntBASIC2.92□□□□□ -1.94
SOX9P48436 AC107016.2-201ENST00000547968 190 ntBASIC2.92□□□□□ -1.94
SOX9P48436 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.92□□□□□ -1.94
SOX9P48436 AC022202.1-201ENST00000613515 211 ntBASIC2.92□□□□□ -1.94
SOX9P48436 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SOX9P48436 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SOX9P48436 RNU6-862P-201ENST00000362804 105 ntBASIC2.91□□□□□ -1.94
SOX9P48436 RNU6-275P-201ENST00000364910 107 ntBASIC2.91□□□□□ -1.94
SOX9P48436 RNU6-578P-201ENST00000390980 103 ntBASIC2.91□□□□□ -1.94
SOX9P48436 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.91□□□□□ -1.94
SOX9P48436 AC233266.1-201ENST00000454518 96 ntBASIC2.91□□□□□ -1.94
SOX9P48436 RNU7-94P-201ENST00000459576 63 ntBASIC2.91□□□□□ -1.94
SOX9P48436 RN7SL499P-201ENST00000481141 276 ntBASIC2.91□□□□□ -1.94
SOX9P48436 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.91□□□□□ -1.94
SOX9P48436 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.91□□□□□ -1.94
SOX9P48436 MIR4435-1-201ENST00000582552 80 ntBASIC2.91□□□□□ -1.94
SOX9P48436 AC242852.1-201ENST00000612151 96 ntBASIC2.91□□□□□ -1.94
SOX9P48436 AC244015.1-201ENST00000622301 99 ntBASIC2.91□□□□□ -1.94
SOX9P48436 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SOX9P48436 RNA5SP496-201ENST00000391240 109 ntBASIC2.9□□□□□ -1.95
SOX9P48436 AL451074.5-201ENST00000415894 435 ntBASIC2.9□□□□□ -1.95
SOX9P48436 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.9□□□□□ -1.95
SOX9P48436 AC091544.4-201ENST00000555268 342 ntBASIC2.9□□□□□ -1.95
SOX9P48436 MIR3169-201ENST00000578032 83 ntBASIC2.9□□□□□ -1.95
SOX9P48436 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.9□□□□□ -1.95
SOX9P48436 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.9□□□□□ -1.95
SOX9P48436 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.9□□□□□ -1.95
SOX9P48436 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.9□□□□□ -1.95
SOX9P48436 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
SOX9P48436 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SOX9P48436 Y_RNA.203-201ENST00000364106 102 ntBASIC2.89□□□□□ -1.95
SOX9P48436 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
SOX9P48436 RNU6-1228P-201ENST00000391014 107 ntBASIC2.89□□□□□ -1.95
SOX9P48436 AL138827.1-201ENST00000402666 306 ntBASIC2.89□□□□□ -1.95
SOX9P48436 MIR1261-201ENST00000408659 82 ntBASIC2.89□□□□□ -1.95
SOX9P48436 RNA5SP274-201ENST00000410484 108 ntBASIC2.89□□□□□ -1.95
SOX9P48436 BMS1P22-201ENST00000414726 313 ntBASIC2.89□□□□□ -1.95
SOX9P48436 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.89□□□□□ -1.95
SOX9P48436 AL121914.1-201ENST00000450188 156 ntBASIC2.89□□□□□ -1.95
SOX9P48436 RNU6-453P-201ENST00000516819 85 ntBASIC2.89□□□□□ -1.95
SOX9P48436 RNU6-1212P-201ENST00000517023 104 ntBASIC2.89□□□□□ -1.95
SOX9P48436 AC005786.1-201ENST00000588553 154 ntBASIC2.89□□□□□ -1.95
SOX9P48436 AL929325.1-201ENST00000603096 117 ntBASIC2.89□□□□□ -1.95
SOX9P48436 AC108706.1-201ENST00000611053 297 ntBASIC2.89□□□□□ -1.95
SOX9P48436 AC104465.1-201ENST00000611365 139 ntBASIC2.89□□□□□ -1.95
SOX9P48436 JPX_2.1-201ENST00000614161 69 ntBASIC2.89□□□□□ -1.95
SOX9P48436 MIR6079-201ENST00000635807 62 ntBASIC2.89□□□□□ -1.95
SOX9P48436 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SOX9P48436 AC018630.2-201ENST00000534866 2403 ntBASIC2.89□□□□□ -1.95
SOX9P48436 Y_RNA.8-201ENST00000362353 102 ntBASIC2.88□□□□□ -1.95
SOX9P48436 Y_RNA.267-201ENST00000364679 109 ntBASIC2.88□□□□□ -1.95
SOX9P48436 MIR887-201ENST00000401258 79 ntBASIC2.88□□□□□ -1.95
SOX9P48436 AL117342.1-201ENST00000404861 406 ntBASIC2.88□□□□□ -1.95
SOX9P48436 AL606845.1-201ENST00000404881 255 ntBASIC2.88□□□□□ -1.95
SOX9P48436 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.88□□□□□ -1.95
SOX9P48436 RNA5SP508-201ENST00000411327 119 ntBASIC2.88□□□□□ -1.95
SOX9P48436 TRBV12-1-201ENST00000479785 344 ntBASIC2.88□□□□□ -1.95
SOX9P48436 RN7SL633P-201ENST00000488974 297 ntBASIC2.88□□□□□ -1.95
SOX9P48436 AC005840.1-201ENST00000498412 377 ntBASIC2.88□□□□□ -1.95
SOX9P48436 AC109810.1-201ENST00000534066 224 ntBASIC2.88□□□□□ -1.95
SOX9P48436 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.88□□□□□ -1.95
SOX9P48436 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
SOX9P48436 AC100821.1-201ENST00000523153 2479 ntBASIC2.88□□□□□ -1.95
SOX9P48436 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SOX9P48436 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SOX9P48436 RNU6-859P-201ENST00000362728 107 ntBASIC2.87□□□□□ -1.95
SOX9P48436 RNU6-728P-201ENST00000365375 104 ntBASIC2.87□□□□□ -1.95
SOX9P48436 RNY3P5-201ENST00000384127 102 ntBASIC2.87□□□□□ -1.95
SOX9P48436 RNU11-3P-201ENST00000391111 133 ntBASIC2.87□□□□□ -1.95
SOX9P48436 BX510359.4-201ENST00000423750 193 ntBASIC2.87□□□□□ -1.95
SOX9P48436 SEPT7P4-201ENST00000437076 306 ntBASIC2.87□□□□□ -1.95
SOX9P48436 MTND2P29-201ENST00000438595 412 ntBASIC2.87□□□□□ -1.95
SOX9P48436 SCARNA8-201ENST00000515924 131 ntBASIC2.87□□□□□ -1.95
SOX9P48436 RNA5SP76-201ENST00000516277 87 ntBASIC2.87□□□□□ -1.95
SOX9P48436 RNU7-128P-201ENST00000517247 62 ntBASIC2.87□□□□□ -1.95
SOX9P48436 MIR6733-201ENST00000635723 61 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms