Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.56□□□□□ -2
SDHAP31040 AC018634.1-201ENST00000437554 401 ntBASIC2.56□□□□□ -2
SDHAP31040 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.56□□□□□ -2
SDHAP31040 SNORA9.3-201ENST00000516383 129 ntBASIC2.56□□□□□ -2
SDHAP31040 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.56□□□□□ -2
SDHAP31040 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.56□□□□□ -2
SDHAP31040 RPL23AP91-201ENST00000569211 455 ntBASIC2.56□□□□□ -2
SDHAP31040 AL031274.2-201ENST00000599419 203 ntBASIC2.56□□□□□ -2
SDHAP31040 AL049861.1-201ENST00000603130 150 ntBASIC2.56□□□□□ -2
SDHAP31040 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.56□□□□□ -2
SDHAP31040 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SDHAP31040 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.56□□□□□ -2
SDHAP31040 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SDHAP31040 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.56□□□□□ -2
SDHAP31040 RNA5SP374-201ENST00000362939 125 ntBASIC2.55□□□□□ -2
SDHAP31040 RNU6-1164P-201ENST00000364428 107 ntBASIC2.55□□□□□ -2
SDHAP31040 RNY3P5-201ENST00000384127 102 ntBASIC2.55□□□□□ -2
SDHAP31040 MIR515-2-201ENST00000384883 83 ntBASIC2.55□□□□□ -2
SDHAP31040 MIR515-1-201ENST00000384884 83 ntBASIC2.55□□□□□ -2
SDHAP31040 MIR29C-201ENST00000385231 88 ntBASIC2.55□□□□□ -2
SDHAP31040 Y_RNA.580-201ENST00000391004 95 ntBASIC2.55□□□□□ -2
SDHAP31040 AL590004.2-201ENST00000404787 371 ntBASIC2.55□□□□□ -2
SDHAP31040 SNORA79-201ENST00000408376 140 ntBASIC2.55□□□□□ -2
SDHAP31040 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.55□□□□□ -2
SDHAP31040 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.55□□□□□ -2
SDHAP31040 AC022018.1-201ENST00000430685 241 ntBASIC2.55□□□□□ -2
SDHAP31040 AL049873.1-201ENST00000480540 376 ntBASIC2.55□□□□□ -2
SDHAP31040 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
SDHAP31040 RNU6-561P-201ENST00000516222 102 ntBASIC2.55□□□□□ -2
SDHAP31040 RPPH1-2P-201ENST00000516688 293 ntBASIC2.55□□□□□ -2
SDHAP31040 JPX_2.1-201ENST00000614161 69 ntBASIC2.55□□□□□ -2
SDHAP31040 MIR6079-201ENST00000635807 62 ntBASIC2.55□□□□□ -2
SDHAP31040 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SDHAP31040 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.54□□□□□ -2
SDHAP31040 MIR26A1-201ENST00000362205 77 ntBASIC2.54□□□□□ -2
SDHAP31040 SNORA33-201ENST00000363664 130 ntBASIC2.54□□□□□ -2
SDHAP31040 RNU6-151P-201ENST00000364158 107 ntBASIC2.54□□□□□ -2
SDHAP31040 RNU1-148P-201ENST00000384472 162 ntBASIC2.54□□□□□ -2
SDHAP31040 RN7SKP101-201ENST00000411376 320 ntBASIC2.54□□□□□ -2
SDHAP31040 RNU6-1291P-201ENST00000516591 104 ntBASIC2.54□□□□□ -2
SDHAP31040 SNORA70.24-201ENST00000517233 118 ntBASIC2.54□□□□□ -2
SDHAP31040 RNU7-128P-201ENST00000517247 62 ntBASIC2.54□□□□□ -2
SDHAP31040 MIR3169-201ENST00000578032 83 ntBASIC2.54□□□□□ -2
SDHAP31040 MIR3605-201ENST00000583214 100 ntBASIC2.54□□□□□ -2
SDHAP31040 MIR4658-201ENST00000584344 65 ntBASIC2.54□□□□□ -2
SDHAP31040 AL161756.2-201ENST00000604597 246 ntBASIC2.54□□□□□ -2
SDHAP31040 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SDHAP31040 AC100821.1-201ENST00000523153 2479 ntBASIC2.53□□□□□ -2
SDHAP31040 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.53□□□□□ -2
SDHAP31040 MIR422A-201ENST00000362286 90 ntBASIC2.53□□□□□ -2
SDHAP31040 Y_RNA.337-201ENST00000365312 102 ntBASIC2.53□□□□□ -2
SDHAP31040 RNU6-1080P-201ENST00000383982 107 ntBASIC2.53□□□□□ -2
SDHAP31040 RNU6-643P-201ENST00000384018 107 ntBASIC2.53□□□□□ -2
SDHAP31040 AL117342.1-201ENST00000404861 406 ntBASIC2.53□□□□□ -2
SDHAP31040 SNORA11.4-201ENST00000408823 129 ntBASIC2.53□□□□□ -2
SDHAP31040 CST2P1-201ENST00000425770 87 ntBASIC2.53□□□□□ -2
SDHAP31040 AC063976.3-201ENST00000426849 329 ntBASIC2.53□□□□□ -2
SDHAP31040 SCGB1D5P-201ENST00000515134 247 ntBASIC2.53□□□□□ -2
SDHAP31040 AC004486.1-201ENST00000546846 233 ntBASIC2.53□□□□□ -2
SDHAP31040 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.53□□□□□ -2
SDHAP31040 MIR3651-201ENST00000630427 90 ntBASIC2.53□□□□□ -2
SDHAP31040 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.53□□□□□ -2
SDHAP31040 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.53□□□□□ -2
SDHAP31040 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SDHAP31040 AC018630.2-201ENST00000534866 2403 ntBASIC2.52□□□□□ -2.01
SDHAP31040 AL161431.1-201ENST00000618966 4205 ntBASIC2.52□□□□□ -2.01
SDHAP31040 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.52□□□□□ -2.01
SDHAP31040 MIR491-201ENST00000384877 84 ntBASIC2.52□□□□□ -2.01
SDHAP31040 AC003982.1-202ENST00000469928 248 ntBASIC2.52□□□□□ -2.01
SDHAP31040 SCARNA13-201ENST00000516672 275 ntBASIC2.52□□□□□ -2.01
SDHAP31040 AC024995.1-201ENST00000523014 93 ntBASIC2.52□□□□□ -2.01
SDHAP31040 MIR3910-1-201ENST00000580936 111 ntBASIC2.52□□□□□ -2.01
SDHAP31040 MIR5195-201ENST00000583555 115 ntBASIC2.52□□□□□ -2.01
SDHAP31040 AC091178.2-201ENST00000584401 117 ntBASIC2.52□□□□□ -2.01
SDHAP31040 RPL12P50-201ENST00000603116 116 ntBASIC2.52□□□□□ -2.01
SDHAP31040 MIR8057-201ENST00000620957 69 ntBASIC2.52□□□□□ -2.01
SDHAP31040 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SDHAP31040 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SDHAP31040 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SDHAP31040 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SDHAP31040 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SDHAP31040 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.52□□□□□ -2.01
SDHAP31040 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.51□□□□□ -2.01
SDHAP31040 ZNF271P-202ENST00000465539 1970 ntBASIC2.51□□□□□ -2.01
SDHAP31040 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SDHAP31040 RNU1-58P-201ENST00000362413 163 ntBASIC2.51□□□□□ -2.01
SDHAP31040 RNU6-1209P-201ENST00000363655 107 ntBASIC2.51□□□□□ -2.01
SDHAP31040 SNORD45.3-201ENST00000363836 72 ntBASIC2.51□□□□□ -2.01
SDHAP31040 Y_RNA.343-201ENST00000365354 112 ntBASIC2.51□□□□□ -2.01
SDHAP31040 Y_RNA.400-201ENST00000383963 111 ntBASIC2.51□□□□□ -2.01
SDHAP31040 Y_RNA.521-201ENST00000384560 114 ntBASIC2.51□□□□□ -2.01
SDHAP31040 MIR562-201ENST00000384894 95 ntBASIC2.51□□□□□ -2.01
SDHAP31040 MIR613-201ENST00000385248 95 ntBASIC2.51□□□□□ -2.01
SDHAP31040 BX510359.4-201ENST00000423750 193 ntBASIC2.51□□□□□ -2.01
SDHAP31040 RNU7-94P-201ENST00000459576 63 ntBASIC2.51□□□□□ -2.01
SDHAP31040 RNU6-406P-201ENST00000516470 107 ntBASIC2.51□□□□□ -2.01
SDHAP31040 RNU6-341P-201ENST00000516973 96 ntBASIC2.51□□□□□ -2.01
SDHAP31040 MIR3670-2-201ENST00000582974 65 ntBASIC2.51□□□□□ -2.01
SDHAP31040 MIR3670-1-201ENST00000584160 65 ntBASIC2.51□□□□□ -2.01
SDHAP31040 MIR3670-3-201ENST00000584855 65 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms