Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 U6.92-201ENST00000636464 89 ntBASIC1.03□□□□□ -2.25
COL5A1P20908 RNU6-222P-201ENST00000362438 107 ntBASIC1.02□□□□□ -2.25
COL5A1P20908 Y_RNA.153-201ENST00000363615 91 ntBASIC1.02□□□□□ -2.25
COL5A1P20908 Y_RNA.258-201ENST00000364613 105 ntBASIC1.02□□□□□ -2.25
COL5A1P20908 RNU6-472P-201ENST00000384299 107 ntBASIC1.02□□□□□ -2.25
COL5A1P20908 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
COL5A1P20908 RNU6-1109P-201ENST00000391187 107 ntBASIC1.02□□□□□ -2.25
COL5A1P20908 MIR208B-201ENST00000401172 77 ntBASIC1.02□□□□□ -2.25
COL5A1P20908 MTCO3P19-201ENST00000415864 321 ntBASIC1.02□□□□□ -2.25
COL5A1P20908 CBX3P6-201ENST00000430257 527 ntBASIC1.02□□□□□ -2.25
COL5A1P20908 RPS29P23-201ENST00000458635 123 ntBASIC1.02□□□□□ -2.25
COL5A1P20908 AC025465.3-201ENST00000510570 311 ntBASIC1.02□□□□□ -2.25
COL5A1P20908 Y_RNA.683-201ENST00000516508 93 ntBASIC1.02□□□□□ -2.25
COL5A1P20908 Y_RNA.721-201ENST00000517207 102 ntBASIC1.02□□□□□ -2.25
COL5A1P20908 AC131281.1-201ENST00000522984 164 ntBASIC1.02□□□□□ -2.25
COL5A1P20908 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.02□□□□□ -2.25
COL5A1P20908 AC004817.2-201ENST00000561794 651 ntBASIC1.02□□□□□ -2.25
COL5A1P20908 RPL17P51-201ENST00000605218 238 ntBASIC1.02□□□□□ -2.25
COL5A1P20908 AC022441.3-201ENST00000605737 136 ntBASIC1.02□□□□□ -2.25
COL5A1P20908 AC010999.1-201ENST00000611856 324 ntBASIC1.02□□□□□ -2.25
COL5A1P20908 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.02□□□□□ -2.25
COL5A1P20908 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.01□□□□□ -2.25
COL5A1P20908 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
COL5A1P20908 MIR410-201ENST00000362222 80 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 Y_RNA.193-201ENST00000363979 102 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 Y_RNA.222-201ENST00000364264 102 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 Y_RNA.332-201ENST00000365271 113 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 Y_RNA.389-201ENST00000383924 113 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 RNU6-160P-201ENST00000384591 107 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 MIR329-1-201ENST00000385028 80 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 RNU6-1093P-201ENST00000391194 107 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
COL5A1P20908 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.01□□□□□ -2.25
COL5A1P20908 AC139712.2-201ENST00000424302 339 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 AC067942.3-201ENST00000512025 362 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.01□□□□□ -2.25
COL5A1P20908 RNU7-4P-201ENST00000516961 62 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 SNORD116.3-201ENST00000517176 78 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 AC023157.2-201ENST00000540596 141 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 RRN3P3-201ENST00000549207 578 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 AC233702.2-202ENST00000562547 291 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 MIR5695-201ENST00000579717 85 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.01□□□□□ -2.25
COL5A1P20908 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.01□□□□□ -2.25
COL5A1P20908 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 AC090517.3-201ENST00000625170 141 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
COL5A1P20908 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 RNU6-1309P-201ENST00000363305 108 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 U3.9-201ENST00000363823 204 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 Y_RNA.210-201ENST00000364161 110 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 RNU6-454P-201ENST00000364292 107 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 SNORA63C-201ENST00000364578 129 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 RNU1-78P-201ENST00000391248 165 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 RNU6-121P-201ENST00000410525 99 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 RNA5SP475-201ENST00000410568 110 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 RNU2-63P-201ENST00000410792 194 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 ELOCP20-201ENST00000422460 345 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 MTND2P23-201ENST00000422990 651 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 AC096920.1-201ENST00000423991 241 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 snoU13.6-201ENST00000458785 104 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 HAR1A.1-201ENST00000459583 118 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 MTCO2P24-201ENST00000515611 426 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 SNORA40.9-201ENST00000515895 93 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 RNU6-1338P-201ENST00000516328 91 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 RNU6-1098P-201ENST00000516772 96 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.01□□□□□ -2.25
COL5A1P20908 AP003733.2-201ENST00000529409 171 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 MIR5188-201ENST00000583467 113 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.01□□□□□ -2.25
COL5A1P20908 AC124312.5-201ENST00000604451 268 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 SNORD11B-201ENST00000607707 90 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.01□□□□□ -2.25
COL5A1P20908 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.01□□□□□ -2.25
COL5A1P20908 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
COL5A1P20908 AC010615.1-201ENST00000594254 1764 ntBASIC1□□□□□ -2.25
COL5A1P20908 LINC02555-201ENST00000563933 1951 ntBASIC1□□□□□ -2.25
COL5A1P20908 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
COL5A1P20908 AC008555.8-201ENST00000623602 2168 ntBASIC1□□□□□ -2.25
COL5A1P20908 Y_RNA.106-201ENST00000363189 100 ntBASIC1□□□□□ -2.25
COL5A1P20908 Y_RNA.143-201ENST00000363520 106 ntBASIC1□□□□□ -2.25
COL5A1P20908 SNORD114-6-201ENST00000364393 72 ntBASIC1□□□□□ -2.25
COL5A1P20908 RNU6-450P-201ENST00000364654 107 ntBASIC1□□□□□ -2.25
COL5A1P20908 MIR532-201ENST00000385025 91 ntBASIC1□□□□□ -2.25
COL5A1P20908 RNU2-54P-201ENST00000410299 190 ntBASIC1□□□□□ -2.25
COL5A1P20908 RNU6-1001P-201ENST00000411265 100 ntBASIC1□□□□□ -2.25
COL5A1P20908 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1□□□□□ -2.25
COL5A1P20908 SDAD1P3-201ENST00000427380 333 ntBASIC1□□□□□ -2.25
COL5A1P20908 RAB28P5-201ENST00000427490 651 ntBASIC1□□□□□ -2.25
COL5A1P20908 RPL30P4-201ENST00000429309 333 ntBASIC1□□□□□ -2.25
COL5A1P20908 MTCYBP9-201ENST00000431021 303 ntBASIC1□□□□□ -2.25
COL5A1P20908 MTND3P2-201ENST00000438452 342 ntBASIC1□□□□□ -2.25
COL5A1P20908 HSPE1P13-201ENST00000451143 297 ntBASIC1□□□□□ -2.25
COL5A1P20908 AC114982.1-201ENST00000469402 321 ntBASIC1□□□□□ -2.25
COL5A1P20908 HMGN1P10-201ENST00000474557 553 ntBASIC1□□□□□ -2.25
COL5A1P20908 HMGN2P9-201ENST00000476875 229 ntBASIC1□□□□□ -2.25
COL5A1P20908 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms