Protein–RNA interactions for Protein: P20393

NR1D1, Nuclear receptor subfamily 1 group D member 1, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1P20393 RNU4-90P-201ENST00000362773 141 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 SNORA72.2-201ENST00000365028 127 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 RNU6-290P-201ENST00000365212 101 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 RNU6-1318P-201ENST00000365389 103 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 MIR548B-201ENST00000385247 97 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 MIR1185-2-201ENST00000408687 86 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 Y_RNA.602-201ENST00000410535 92 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 RNU6-847P-201ENST00000411115 108 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 BX510359.4-201ENST00000423750 193 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 SUMO1P2-201ENST00000452524 304 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 RNU6-1023P-201ENST00000516137 106 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 RNU6-1338P-201ENST00000516328 91 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 RNU6-107P-201ENST00000516643 102 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 AC024614.2-201ENST00000577584 372 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 MIR4299-201ENST00000577899 72 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.95□□□□□ -2.1
NR1D1P20393 AC022441.3-201ENST00000605737 136 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 AC011373.1-201ENST00000607270 237 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 Y_RNA.783-201ENST00000613546 102 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.95□□□□□ -2.1
NR1D1P20393 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
NR1D1P20393 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
NR1D1P20393 Y_RNA.99-201ENST00000363138 105 ntBASIC1.94□□□□□ -2.1
NR1D1P20393 Y_RNA.237-201ENST00000364439 102 ntBASIC1.94□□□□□ -2.1
NR1D1P20393 RNU6-1175P-201ENST00000365200 107 ntBASIC1.94□□□□□ -2.1
NR1D1P20393 RNU6-1235P-201ENST00000384559 107 ntBASIC1.94□□□□□ -2.1
NR1D1P20393 RNA5SP465-201ENST00000391195 109 ntBASIC1.94□□□□□ -2.1
NR1D1P20393 SNORA26.9-201ENST00000391322 122 ntBASIC1.94□□□□□ -2.1
NR1D1P20393 AL158823.1-201ENST00000418441 478 ntBASIC1.94□□□□□ -2.1
NR1D1P20393 AL445646.1-201ENST00000431784 216 ntBASIC1.94□□□□□ -2.1
NR1D1P20393 MTND2P29-201ENST00000438595 412 ntBASIC1.94□□□□□ -2.1
NR1D1P20393 AL357134.1-201ENST00000445848 426 ntBASIC1.94□□□□□ -2.1
NR1D1P20393 RNU6-498P-201ENST00000459468 107 ntBASIC1.94□□□□□ -2.1
NR1D1P20393 RNU7-57P-201ENST00000459540 60 ntBASIC1.94□□□□□ -2.1
NR1D1P20393 DEFB108E-201ENST00000524692 240 ntBASIC1.94□□□□□ -2.1
NR1D1P20393 AC087441.2-201ENST00000529141 262 ntBASIC1.94□□□□□ -2.1
NR1D1P20393 MIR3128-201ENST00000581957 66 ntBASIC1.94□□□□□ -2.1
NR1D1P20393 AC012433.1-201ENST00000588916 398 ntBASIC1.94□□□□□ -2.1
NR1D1P20393 AC004467.1-201ENST00000615678 330 ntBASIC1.94□□□□□ -2.1
NR1D1P20393 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.93□□□□□ -2.1
NR1D1P20393 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
NR1D1P20393 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
NR1D1P20393 Y_RNA.16-201ENST00000362421 102 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 RNU6-1164P-201ENST00000364428 107 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 Y_RNA.286-201ENST00000364813 102 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 SNORA25.9-201ENST00000365087 128 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 Y_RNA.478-201ENST00000384358 107 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 RNU6-21P-201ENST00000384710 107 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 MIR583-201ENST00000384846 75 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 MIR548H3-201ENST00000408771 118 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 RNU4-30P-201ENST00000410245 143 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 RNU2-54P-201ENST00000410299 190 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.93□□□□□ -2.1
NR1D1P20393 AC005042.3-201ENST00000453230 174 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 RNU6-221P-201ENST00000459541 99 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 RPL23AP63-201ENST00000498752 471 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 RNU7-110P-201ENST00000516891 62 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 AC055872.1-201ENST00000570978 278 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.93□□□□□ -2.1
NR1D1P20393 AL096840.1-201ENST00000603287 93 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 AC006380.1-201ENST00000603598 186 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 SNRPGP19-201ENST00000603826 189 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 snoU13.31-201ENST00000607291 104 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 AC090425.1-201ENST00000610007 140 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 AL773524.1-201ENST00000614065 229 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 snoZ196.1-201ENST00000625269 89 ntBASIC1.93□□□□□ -2.1
NR1D1P20393 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
NR1D1P20393 Y_RNA.20-201ENST00000362479 113 ntBASIC1.92□□□□□ -2.1
NR1D1P20393 Y_RNA.60-201ENST00000362831 98 ntBASIC1.92□□□□□ -2.1
NR1D1P20393 Y_RNA.352-201ENST00000365439 102 ntBASIC1.92□□□□□ -2.1
NR1D1P20393 Y_RNA.416-201ENST00000384014 113 ntBASIC1.92□□□□□ -2.1
NR1D1P20393 MIR676-201ENST00000390702 67 ntBASIC1.92□□□□□ -2.1
NR1D1P20393 SNORA40.18-201ENST00000391200 128 ntBASIC1.92□□□□□ -2.1
NR1D1P20393 AC108667.1-201ENST00000428618 249 ntBASIC1.92□□□□□ -2.1
NR1D1P20393 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.92□□□□□ -2.1
NR1D1P20393 MTCO1P44-201ENST00000441935 243 ntBASIC1.92□□□□□ -2.1
NR1D1P20393 MTND4LP30-201ENST00000454092 297 ntBASIC1.92□□□□□ -2.1
NR1D1P20393 HMGB3P17-201ENST00000504195 649 ntBASIC1.92□□□□□ -2.1
NR1D1P20393 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.92□□□□□ -2.1
NR1D1P20393 MRPS17P9-201ENST00000511924 393 ntBASIC1.92□□□□□ -2.1
NR1D1P20393 SERF1AP1-201ENST00000514575 187 ntBASIC1.92□□□□□ -2.1
NR1D1P20393 AP002001.1-203ENST00000534002 267 ntBASIC1.92□□□□□ -2.1
NR1D1P20393 AC005357.1-201ENST00000588399 301 ntBASIC1.92□□□□□ -2.1
NR1D1P20393 AL590240.4-201ENST00000616908 390 ntBASIC1.92□□□□□ -2.1
NR1D1P20393 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
NR1D1P20393 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
NR1D1P20393 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
NR1D1P20393 SNORD114-7-201ENST00000362520 77 ntBASIC1.91□□□□□ -2.1
NR1D1P20393 Y_RNA.101-201ENST00000363154 102 ntBASIC1.91□□□□□ -2.1
NR1D1P20393 SNORA16.1-201ENST00000364597 132 ntBASIC1.91□□□□□ -2.1
NR1D1P20393 SNORA20.1-201ENST00000364790 130 ntBASIC1.91□□□□□ -2.1
NR1D1P20393 RNU6-326P-201ENST00000365480 107 ntBASIC1.91□□□□□ -2.1
NR1D1P20393 SNORA8-201ENST00000384574 139 ntBASIC1.91□□□□□ -2.1
NR1D1P20393 RNU11-3P-201ENST00000391111 133 ntBASIC1.91□□□□□ -2.1
NR1D1P20393 SNORA17.3-201ENST00000391159 129 ntBASIC1.91□□□□□ -2.1
NR1D1P20393 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.91□□□□□ -2.1
NR1D1P20393 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.91□□□□□ -2.1
NR1D1P20393 AC008134.1-201ENST00000420943 193 ntBASIC1.91□□□□□ -2.1
NR1D1P20393 RNU6-388P-201ENST00000517012 105 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms