Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL356292.1-201ENST00000283110 373 ntBASIC3.95□□□□□ -1.78
CSB-PGBD3P0DP91 AC073325.2-201ENST00000339545 159 ntBASIC3.95□□□□□ -1.78
CSB-PGBD3P0DP91 RNU6-880P-201ENST00000384526 107 ntBASIC3.95□□□□□ -1.78
CSB-PGBD3P0DP91 MIRLET7F2-201ENST00000385277 83 ntBASIC3.95□□□□□ -1.78
CSB-PGBD3P0DP91 AL603914.1-201ENST00000401964 204 ntBASIC3.95□□□□□ -1.78
CSB-PGBD3P0DP91 AL135786.1-201ENST00000415892 214 ntBASIC3.95□□□□□ -1.78
CSB-PGBD3P0DP91 AC009969.1-201ENST00000438726 172 ntBASIC3.95□□□□□ -1.78
CSB-PGBD3P0DP91 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.95□□□□□ -1.78
CSB-PGBD3P0DP91 Y_RNA.649-201ENST00000459077 103 ntBASIC3.95□□□□□ -1.78
CSB-PGBD3P0DP91 RPS29P24-201ENST00000486345 171 ntBASIC3.95□□□□□ -1.78
CSB-PGBD3P0DP91 RNU6-63P-201ENST00000516690 95 ntBASIC3.95□□□□□ -1.78
CSB-PGBD3P0DP91 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.95□□□□□ -1.78
CSB-PGBD3P0DP91 MIR1248-201ENST00000629190 106 ntBASIC3.95□□□□□ -1.78
CSB-PGBD3P0DP91 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CSB-PGBD3P0DP91 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CSB-PGBD3P0DP91 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CSB-PGBD3P0DP91 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CSB-PGBD3P0DP91 SNORA27.1-201ENST00000362604 124 ntBASIC3.94□□□□□ -1.78
CSB-PGBD3P0DP91 RNU6-674P-201ENST00000363831 107 ntBASIC3.94□□□□□ -1.78
CSB-PGBD3P0DP91 RNU6-851P-201ENST00000384565 107 ntBASIC3.94□□□□□ -1.78
CSB-PGBD3P0DP91 MIR95-201ENST00000385072 81 ntBASIC3.94□□□□□ -1.78
CSB-PGBD3P0DP91 RNA5SP496-201ENST00000391240 109 ntBASIC3.94□□□□□ -1.78
CSB-PGBD3P0DP91 AC063976.3-201ENST00000426849 329 ntBASIC3.94□□□□□ -1.78
CSB-PGBD3P0DP91 RPS26P55-201ENST00000471178 356 ntBASIC3.94□□□□□ -1.78
CSB-PGBD3P0DP91 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.94□□□□□ -1.78
CSB-PGBD3P0DP91 RN7SKP19-201ENST00000516016 252 ntBASIC3.94□□□□□ -1.78
CSB-PGBD3P0DP91 RNU6-537P-201ENST00000517277 103 ntBASIC3.94□□□□□ -1.78
CSB-PGBD3P0DP91 AC005972.2-201ENST00000604690 348 ntBASIC3.94□□□□□ -1.78
CSB-PGBD3P0DP91 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.94□□□□□ -1.78
CSB-PGBD3P0DP91 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CSB-PGBD3P0DP91 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CSB-PGBD3P0DP91 Y_RNA.91-201ENST00000363042 107 ntBASIC3.93□□□□□ -1.78
CSB-PGBD3P0DP91 RNU6-647P-201ENST00000364243 107 ntBASIC3.93□□□□□ -1.78
CSB-PGBD3P0DP91 RNU6-438P-201ENST00000365561 103 ntBASIC3.93□□□□□ -1.78
CSB-PGBD3P0DP91 RNU6-1080P-201ENST00000383982 107 ntBASIC3.93□□□□□ -1.78
CSB-PGBD3P0DP91 MIR1302-4-201ENST00000408701 150 ntBASIC3.93□□□□□ -1.78
CSB-PGBD3P0DP91 RNU2-63P-201ENST00000410792 194 ntBASIC3.93□□□□□ -1.78
CSB-PGBD3P0DP91 RNU6-1299P-201ENST00000516316 100 ntBASIC3.93□□□□□ -1.78
CSB-PGBD3P0DP91 AC107016.2-201ENST00000547968 190 ntBASIC3.93□□□□□ -1.78
CSB-PGBD3P0DP91 AL160236.1-201ENST00000556317 195 ntBASIC3.93□□□□□ -1.78
CSB-PGBD3P0DP91 AC007318.2-201ENST00000620999 243 ntBASIC3.93□□□□□ -1.78
CSB-PGBD3P0DP91 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSB-PGBD3P0DP91 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.93□□□□□ -1.78
CSB-PGBD3P0DP91 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSB-PGBD3P0DP91 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSB-PGBD3P0DP91 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CSB-PGBD3P0DP91 AL159152.1-201ENST00000635019 2587 ntBASIC3.92□□□□□ -1.78
CSB-PGBD3P0DP91 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.92□□□□□ -1.78
CSB-PGBD3P0DP91 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.92□□□□□ -1.78
CSB-PGBD3P0DP91 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.92□□□□□ -1.78
CSB-PGBD3P0DP91 RNU6-975P-201ENST00000384296 105 ntBASIC3.92□□□□□ -1.78
CSB-PGBD3P0DP91 SNORA72-201ENST00000384339 132 ntBASIC3.92□□□□□ -1.78
CSB-PGBD3P0DP91 SNORD14D-201ENST00000384390 87 ntBASIC3.92□□□□□ -1.78
CSB-PGBD3P0DP91 RNU6-136P-201ENST00000384663 107 ntBASIC3.92□□□□□ -1.78
CSB-PGBD3P0DP91 MIR196B-201ENST00000384852 84 ntBASIC3.92□□□□□ -1.78
CSB-PGBD3P0DP91 RNU2-55P-201ENST00000411146 174 ntBASIC3.92□□□□□ -1.78
CSB-PGBD3P0DP91 RPL39P40-201ENST00000445481 146 ntBASIC3.92□□□□□ -1.78
CSB-PGBD3P0DP91 RPL36AP21-201ENST00000490372 323 ntBASIC3.92□□□□□ -1.78
CSB-PGBD3P0DP91 RNU7-116P-201ENST00000516940 62 ntBASIC3.92□□□□□ -1.78
CSB-PGBD3P0DP91 SNORA48.11-201ENST00000517015 89 ntBASIC3.92□□□□□ -1.78
CSB-PGBD3P0DP91 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.92□□□□□ -1.78
CSB-PGBD3P0DP91 AL356280.1-201ENST00000603614 379 ntBASIC3.92□□□□□ -1.78
CSB-PGBD3P0DP91 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.92□□□□□ -1.78
CSB-PGBD3P0DP91 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 RNU1-23P-201ENST00000363361 144 ntBASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 RNU6-461P-201ENST00000364195 107 ntBASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 SNORD73B-201ENST00000364394 72 ntBASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 RNU6-106P-201ENST00000384405 107 ntBASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 RNU6-220P-201ENST00000390919 107 ntBASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 RNA5SP508-201ENST00000411327 119 ntBASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 AC016717.1-201ENST00000448918 286 ntBASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 HMGN2P18-201ENST00000450680 270 ntBASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 SNORD109B-201ENST00000458961 67 ntBASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 SNORD109A-201ENST00000459128 67 ntBASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 RN7SL20P-201ENST00000488827 297 ntBASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 RNA5SP490-201ENST00000517141 136 ntBASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 AC027419.1-201ENST00000522976 328 ntBASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 AC079600.2-201ENST00000550076 130 ntBASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 AC025166.1-201ENST00000612411 163 ntBASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 AL591926.4-201ENST00000616895 298 ntBASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CSB-PGBD3P0DP91 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CSB-PGBD3P0DP91 RNU6-743P-201ENST00000364151 106 ntBASIC3.9□□□□□ -1.79
CSB-PGBD3P0DP91 MIR184-201ENST00000384962 84 ntBASIC3.9□□□□□ -1.79
CSB-PGBD3P0DP91 RNU6-57P-201ENST00000411348 103 ntBASIC3.9□□□□□ -1.79
CSB-PGBD3P0DP91 AL513477.1-202ENST00000417061 214 ntBASIC3.9□□□□□ -1.79
CSB-PGBD3P0DP91 HMGN1P18-201ENST00000457642 277 ntBASIC3.9□□□□□ -1.79
CSB-PGBD3P0DP91 SNORD65B-201ENST00000459126 73 ntBASIC3.9□□□□□ -1.79
CSB-PGBD3P0DP91 IGKV1-22-201ENST00000524313 326 ntBASIC3.9□□□□□ -1.79
CSB-PGBD3P0DP91 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.9□□□□□ -1.79
CSB-PGBD3P0DP91 AL355297.2-201ENST00000604792 129 ntBASIC3.9□□□□□ -1.79
CSB-PGBD3P0DP91 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.9□□□□□ -1.79
CSB-PGBD3P0DP91 RMST_8.1-201ENST00000610287 165 ntBASIC3.9□□□□□ -1.79
CSB-PGBD3P0DP91 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CSB-PGBD3P0DP91 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CSB-PGBD3P0DP91 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CSB-PGBD3P0DP91 MTND5P18-201ENST00000445624 1801 ntBASIC3.89□□□□□ -1.79
CSB-PGBD3P0DP91 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms