Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 U6.108-201ENST00000637764 58 ntBASIC1.69□□□□□ -2.14
NGFP01138 AP000553.5-201ENST00000641933 54 ntBASIC1.69□□□□□ -2.14
NGFP01138 AC008555.8-201ENST00000623602 2168 ntBASIC1.69□□□□□ -2.14
NGFP01138 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
NGFP01138 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
NGFP01138 ZNF355P-201ENST00000427301 3216 ntBASIC1.68□□□□□ -2.14
NGFP01138 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
NGFP01138 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.68□□□□□ -2.14
NGFP01138 MIR335-201ENST00000362173 94 ntBASIC1.68□□□□□ -2.14
NGFP01138 RNU6-862P-201ENST00000362804 105 ntBASIC1.68□□□□□ -2.14
NGFP01138 RNU1-22P-201ENST00000363334 158 ntBASIC1.68□□□□□ -2.14
NGFP01138 RNA5SP138-201ENST00000365098 114 ntBASIC1.68□□□□□ -2.14
NGFP01138 RNU6-117P-201ENST00000365415 107 ntBASIC1.68□□□□□ -2.14
NGFP01138 Y_RNA.569-201ENST00000384749 103 ntBASIC1.68□□□□□ -2.14
NGFP01138 SNORA26.9-201ENST00000391322 122 ntBASIC1.68□□□□□ -2.14
NGFP01138 RNU2-40P-201ENST00000410833 196 ntBASIC1.68□□□□□ -2.14
NGFP01138 RNA5SP501-201ENST00000410990 112 ntBASIC1.68□□□□□ -2.14
NGFP01138 POLR2KP2-201ENST00000438155 177 ntBASIC1.68□□□□□ -2.14
NGFP01138 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.68□□□□□ -2.14
NGFP01138 RNA5SP233-201ENST00000459153 113 ntBASIC1.68□□□□□ -2.14
NGFP01138 RPS26P45-201ENST00000471748 340 ntBASIC1.68□□□□□ -2.14
NGFP01138 TRBVB-201ENST00000477100 408 ntBASIC1.68□□□□□ -2.14
NGFP01138 RNA5SP20-201ENST00000515976 84 ntBASIC1.68□□□□□ -2.14
NGFP01138 SUB1P4-201ENST00000566062 339 ntBASIC1.68□□□□□ -2.14
NGFP01138 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.68□□□□□ -2.14
NGFP01138 AP001282.2-201ENST00000616149 309 ntBASIC1.68□□□□□ -2.14
NGFP01138 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.68□□□□□ -2.14
NGFP01138 U6.104-201ENST00000637979 90 ntBASIC1.68□□□□□ -2.14
NGFP01138 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
NGFP01138 AC010615.1-201ENST00000594254 1764 ntBASIC1.67□□□□□ -2.14
NGFP01138 Y_RNA.124-201ENST00000363339 93 ntBASIC1.67□□□□□ -2.14
NGFP01138 Y_RNA.144-201ENST00000363521 113 ntBASIC1.67□□□□□ -2.14
NGFP01138 RNU6-505P-201ENST00000384427 107 ntBASIC1.67□□□□□ -2.14
NGFP01138 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
NGFP01138 U8.13-201ENST00000390842 128 ntBASIC1.67□□□□□ -2.14
NGFP01138 AC019129.1-201ENST00000403786 261 ntBASIC1.67□□□□□ -2.14
NGFP01138 MIR1302-3-201ENST00000408128 138 ntBASIC1.67□□□□□ -2.14
NGFP01138 MIR1302-6-201ENST00000408466 90 ntBASIC1.67□□□□□ -2.14
NGFP01138 RNU6-710P-201ENST00000410424 105 ntBASIC1.67□□□□□ -2.14
NGFP01138 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.67□□□□□ -2.14
NGFP01138 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.67□□□□□ -2.14
NGFP01138 AC010154.1-201ENST00000425857 269 ntBASIC1.67□□□□□ -2.14
NGFP01138 MTND4LP30-201ENST00000454092 297 ntBASIC1.67□□□□□ -2.14
NGFP01138 Y_RNA.668-201ENST00000516233 93 ntBASIC1.67□□□□□ -2.14
NGFP01138 RNU7-99P-201ENST00000516271 62 ntBASIC1.67□□□□□ -2.14
NGFP01138 RNVU1-2-201ENST00000516326 135 ntBASIC1.67□□□□□ -2.14
NGFP01138 RNU6-1338P-201ENST00000516328 91 ntBASIC1.67□□□□□ -2.14
NGFP01138 AP005660.1-201ENST00000522972 293 ntBASIC1.67□□□□□ -2.14
NGFP01138 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.67□□□□□ -2.14
NGFP01138 MIR4503-201ENST00000582187 83 ntBASIC1.67□□□□□ -2.14
NGFP01138 MIR4438-201ENST00000585271 93 ntBASIC1.67□□□□□ -2.14
NGFP01138 AC007229.1-201ENST00000590455 412 ntBASIC1.67□□□□□ -2.14
NGFP01138 DEFB117-201ENST00000602356 141 ntBASIC1.67□□□□□ -2.14
NGFP01138 U1.36-201ENST00000620684 176 ntBASIC1.67□□□□□ -2.14
NGFP01138 7SK.10-201ENST00000621414 298 ntBASIC1.67□□□□□ -2.14
NGFP01138 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
NGFP01138 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
NGFP01138 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.67□□□□□ -2.14
NGFP01138 AL359851.1-201ENST00000569460 4997 ntBASIC1.67□□□□□ -2.14
NGFP01138 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
NGFP01138 SNORA16B-201ENST00000364674 135 ntBASIC1.66□□□□□ -2.14
NGFP01138 Y_RNA.396-201ENST00000383949 103 ntBASIC1.66□□□□□ -2.14
NGFP01138 Y_RNA.452-201ENST00000384202 108 ntBASIC1.66□□□□□ -2.14
NGFP01138 RNU4-52P-201ENST00000384209 138 ntBASIC1.66□□□□□ -2.14
NGFP01138 Y_RNA.461-201ENST00000384263 103 ntBASIC1.66□□□□□ -2.14
NGFP01138 RNU6-196P-201ENST00000384315 107 ntBASIC1.66□□□□□ -2.14
NGFP01138 Y_RNA.483-201ENST00000384380 101 ntBASIC1.66□□□□□ -2.14
NGFP01138 MIR17-201ENST00000385012 84 ntBASIC1.66□□□□□ -2.14
NGFP01138 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
NGFP01138 RNA5SP467-201ENST00000391274 118 ntBASIC1.66□□□□□ -2.14
NGFP01138 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.66□□□□□ -2.14
NGFP01138 RPS27P22-201ENST00000478056 241 ntBASIC1.66□□□□□ -2.14
NGFP01138 RPS27P21-201ENST00000486977 252 ntBASIC1.66□□□□□ -2.14
NGFP01138 RPL36AP21-201ENST00000490372 323 ntBASIC1.66□□□□□ -2.14
NGFP01138 AC097462.1-201ENST00000514125 324 ntBASIC1.66□□□□□ -2.14
NGFP01138 RNU2-31P-201ENST00000516954 155 ntBASIC1.66□□□□□ -2.14
NGFP01138 RNU6-570P-201ENST00000517051 105 ntBASIC1.66□□□□□ -2.14
NGFP01138 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.66□□□□□ -2.14
NGFP01138 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.66□□□□□ -2.14
NGFP01138 AC023157.2-201ENST00000540596 141 ntBASIC1.66□□□□□ -2.14
NGFP01138 AL359075.3-201ENST00000613288 217 ntBASIC1.66□□□□□ -2.14
NGFP01138 U4.1-201ENST00000620349 87 ntBASIC1.66□□□□□ -2.14
NGFP01138 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.66□□□□□ -2.14
NGFP01138 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.66□□□□□ -2.14
NGFP01138 Y_RNA.16-201ENST00000362421 102 ntBASIC1.65□□□□□ -2.15
NGFP01138 SNORA33-201ENST00000363664 130 ntBASIC1.65□□□□□ -2.15
NGFP01138 RNU6-324P-201ENST00000363957 106 ntBASIC1.65□□□□□ -2.15
NGFP01138 RNU6-1019P-201ENST00000364424 107 ntBASIC1.65□□□□□ -2.15
NGFP01138 Y_RNA.368-201ENST00000365547 113 ntBASIC1.65□□□□□ -2.15
NGFP01138 RNU6-1248P-201ENST00000391096 64 ntBASIC1.65□□□□□ -2.15
NGFP01138 SNORA53-201ENST00000391141 249 ntBASIC1.65□□□□□ -2.15
NGFP01138 EBAG9P1-201ENST00000418955 543 ntBASIC1.65□□□□□ -2.15
NGFP01138 AC024067.1-201ENST00000426199 223 ntBASIC1.65□□□□□ -2.15
NGFP01138 AC245047.4-201ENST00000433189 144 ntBASIC1.65□□□□□ -2.15
NGFP01138 MTCO1P5-201ENST00000433573 344 ntBASIC1.65□□□□□ -2.15
NGFP01138 SERF1AP1-201ENST00000514575 187 ntBASIC1.65□□□□□ -2.15
NGFP01138 RNA5SP364-201ENST00000516938 78 ntBASIC1.65□□□□□ -2.15
NGFP01138 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.65□□□□□ -2.15
NGFP01138 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.65□□□□□ -2.15
NGFP01138 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms