Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 SNORD12-201ENST00000391002 90 ntBASIC0.71□□□□□ -2.3
SEMA3DO95025 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.71□□□□□ -2.3
SEMA3DO95025 AL353997.1-201ENST00000432936 108 ntBASIC0.71□□□□□ -2.3
SEMA3DO95025 Z98949.2-201ENST00000440996 144 ntBASIC0.71□□□□□ -2.3
SEMA3DO95025 AL137792.2-201ENST00000443484 235 ntBASIC0.71□□□□□ -2.3
SEMA3DO95025 AC092989.1-201ENST00000481235 277 ntBASIC0.71□□□□□ -2.3
SEMA3DO95025 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.71□□□□□ -2.3
SEMA3DO95025 RNU6-322P-201ENST00000516010 103 ntBASIC0.71□□□□□ -2.3
SEMA3DO95025 RNU6-720P-201ENST00000516363 108 ntBASIC0.71□□□□□ -2.3
SEMA3DO95025 RNU7-28P-201ENST00000516759 62 ntBASIC0.71□□□□□ -2.3
SEMA3DO95025 AP002004.2-201ENST00000531656 154 ntBASIC0.71□□□□□ -2.3
SEMA3DO95025 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.71□□□□□ -2.3
SEMA3DO95025 AC018448.1-201ENST00000552843 316 ntBASIC0.71□□□□□ -2.3
SEMA3DO95025 AL078603.1-201ENST00000603824 313 ntBASIC0.71□□□□□ -2.3
SEMA3DO95025 AC104260.1-201ENST00000616660 539 ntBASIC0.71□□□□□ -2.3
SEMA3DO95025 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.71□□□□□ -2.3
SEMA3DO95025 U6.115-201ENST00000636045 103 ntBASIC0.71□□□□□ -2.3
SEMA3DO95025 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SEMA3DO95025 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 Y_RNA.118-201ENST00000363300 101 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 Y_RNA.355-201ENST00000365462 98 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 RNU6-42P-201ENST00000384165 107 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 Y_RNA.516-201ENST00000384541 124 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 Y_RNA.573-201ENST00000384763 105 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 RNA5SP482-201ENST00000391269 118 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 Y_RNA.594-201ENST00000410373 140 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 RNA5SP118-201ENST00000410385 109 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.7□□□□□ -2.3
SEMA3DO95025 AL139396.1-201ENST00000421137 167 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 MTATP6P26-201ENST00000445926 662 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 PCNPP5-201ENST00000452246 481 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 snoU13.18-201ENST00000459483 104 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.7□□□□□ -2.3
SEMA3DO95025 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.7□□□□□ -2.3
SEMA3DO95025 Y_RNA.670-201ENST00000516255 105 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 RNU6-63P-201ENST00000516690 95 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 AC022868.1-201ENST00000517767 391 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.7□□□□□ -2.3
SEMA3DO95025 EIF1P4-201ENST00000572664 335 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 AC127459.3-201ENST00000624328 466 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 MIR3688-2-201ENST00000636963 87 ntBASIC0.7□□□□□ -2.3
SEMA3DO95025 RNY1P16-201ENST00000363063 111 ntBASIC0.69□□□□□ -2.3
SEMA3DO95025 RNU4-41P-201ENST00000364426 143 ntBASIC0.69□□□□□ -2.3
SEMA3DO95025 RNU6-117P-201ENST00000365415 107 ntBASIC0.69□□□□□ -2.3
SEMA3DO95025 SNORD114-22-201ENST00000365423 72 ntBASIC0.69□□□□□ -2.3
SEMA3DO95025 Y_RNA.358-201ENST00000365491 99 ntBASIC0.69□□□□□ -2.3
SEMA3DO95025 RNU6-969P-201ENST00000383900 105 ntBASIC0.69□□□□□ -2.3
SEMA3DO95025 MIR526A1-201ENST00000384897 85 ntBASIC0.69□□□□□ -2.3
SEMA3DO95025 RNU6-700P-201ENST00000391043 107 ntBASIC0.69□□□□□ -2.3
SEMA3DO95025 RNU6-1050P-201ENST00000410388 107 ntBASIC0.69□□□□□ -2.3
SEMA3DO95025 RNU5A-5P-201ENST00000411054 116 ntBASIC0.69□□□□□ -2.3
SEMA3DO95025 RPL39P39-201ENST00000455840 151 ntBASIC0.69□□□□□ -2.3
SEMA3DO95025 RNU6-329P-201ENST00000459618 107 ntBASIC0.69□□□□□ -2.3
SEMA3DO95025 AL049830.1-201ENST00000468034 425 ntBASIC0.69□□□□□ -2.3
SEMA3DO95025 AC105029.1-201ENST00000520250 669 ntBASIC0.69□□□□□ -2.3
SEMA3DO95025 FAM106DP-201ENST00000586416 501 ntBASIC0.69□□□□□ -2.3
SEMA3DO95025 AL096861.1-201ENST00000610899 123 ntBASIC0.69□□□□□ -2.3
SEMA3DO95025 SNORD114-24-201ENST00000365029 72 ntBASIC0.68□□□□□ -2.3
SEMA3DO95025 RNU6-318P-201ENST00000384283 103 ntBASIC0.68□□□□□ -2.3
SEMA3DO95025 RNY1P14-201ENST00000384426 108 ntBASIC0.68□□□□□ -2.3
SEMA3DO95025 SNORA80D-201ENST00000384488 135 ntBASIC0.68□□□□□ -2.3
SEMA3DO95025 MIR562-201ENST00000384894 95 ntBASIC0.68□□□□□ -2.3
SEMA3DO95025 MIR548F5-201ENST00000408421 86 ntBASIC0.68□□□□□ -2.3
SEMA3DO95025 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.68□□□□□ -2.3
SEMA3DO95025 AC074085.1-201ENST00000413598 418 ntBASIC0.68□□□□□ -2.3
SEMA3DO95025 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.68□□□□□ -2.3
SEMA3DO95025 snoU13.25-201ENST00000458945 104 ntBASIC0.68□□□□□ -2.3
SEMA3DO95025 RNU6-625P-201ENST00000459412 107 ntBASIC0.68□□□□□ -2.3
SEMA3DO95025 AC074133.1-201ENST00000515696 183 ntBASIC0.68□□□□□ -2.3
SEMA3DO95025 RNU6-1278P-201ENST00000516130 107 ntBASIC0.68□□□□□ -2.3
SEMA3DO95025 RNU6-1016P-201ENST00000516689 94 ntBASIC0.68□□□□□ -2.3
SEMA3DO95025 RNU6-1096P-201ENST00000517089 102 ntBASIC0.68□□□□□ -2.3
SEMA3DO95025 MIR3684-201ENST00000579779 74 ntBASIC0.68□□□□□ -2.3
SEMA3DO95025 AL357312.1-201ENST00000603879 298 ntBASIC0.68□□□□□ -2.3
SEMA3DO95025 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.68□□□□□ -2.3
SEMA3DO95025 MIR3674-201ENST00000636576 68 ntBASIC0.68□□□□□ -2.3
SEMA3DO95025 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.67□□□□□ -2.3
SEMA3DO95025 Y_RNA.318-201ENST00000365131 97 ntBASIC0.67□□□□□ -2.3
SEMA3DO95025 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
SEMA3DO95025 SNORA75.2-201ENST00000391138 150 ntBASIC0.67□□□□□ -2.3
SEMA3DO95025 SNORA75.3-201ENST00000391231 150 ntBASIC0.67□□□□□ -2.3
SEMA3DO95025 MIR873-201ENST00000401120 77 ntBASIC0.67□□□□□ -2.3
SEMA3DO95025 MIR548F1-201ENST00000408667 84 ntBASIC0.67□□□□□ -2.3
SEMA3DO95025 RNA5SP475-201ENST00000410568 110 ntBASIC0.67□□□□□ -2.3
SEMA3DO95025 MTCYBP10-201ENST00000424905 650 ntBASIC0.67□□□□□ -2.3
SEMA3DO95025 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.67□□□□□ -2.3
SEMA3DO95025 RPS3AP52-201ENST00000435639 297 ntBASIC0.67□□□□□ -2.3
SEMA3DO95025 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.67□□□□□ -2.3
SEMA3DO95025 LINC01399-202ENST00000458450 244 ntBASIC0.67□□□□□ -2.3
SEMA3DO95025 RPL7P42-201ENST00000481005 679 ntBASIC0.67□□□□□ -2.3
SEMA3DO95025 PDCD5P2-201ENST00000507570 312 ntBASIC0.67□□□□□ -2.3
SEMA3DO95025 SNORA40.9-201ENST00000515895 93 ntBASIC0.67□□□□□ -2.3
SEMA3DO95025 MIR151B-201ENST00000584249 96 ntBASIC0.67□□□□□ -2.3
SEMA3DO95025 SNORA4-201ENST00000584302 138 ntBASIC0.67□□□□□ -2.3
SEMA3DO95025 PRELID3BP2-201ENST00000605362 201 ntBASIC0.67□□□□□ -2.3
SEMA3DO95025 AC009229.3-201ENST00000608056 282 ntBASIC0.67□□□□□ -2.3
SEMA3DO95025 MIR6788-201ENST00000618842 66 ntBASIC0.67□□□□□ -2.3
SEMA3DO95025 MIR6734-201ENST00000621166 68 ntBASIC0.67□□□□□ -2.3
SEMA3DO95025 MIR410-201ENST00000362222 80 ntBASIC0.66□□□□□ -2.3
SEMA3DO95025 Y_RNA.86-201ENST00000363020 111 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 202.2 ms