Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 MIR5004-201ENST00000579078 107 ntBASIC3.16□□□□□ -1.9
CPNE3O75131 AL355596.1-201ENST00000565399 3996 ntBASIC3.16□□□□□ -1.9
CPNE3O75131 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.16□□□□□ -1.9
CPNE3O75131 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CPNE3O75131 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CPNE3O75131 AL117342.1-201ENST00000404861 406 ntBASIC3.15□□□□□ -1.91
CPNE3O75131 RNU4-47P-201ENST00000410876 114 ntBASIC3.15□□□□□ -1.91
CPNE3O75131 AC092427.1-202ENST00000430569 476 ntBASIC3.15□□□□□ -1.91
CPNE3O75131 AC104389.3-201ENST00000445629 235 ntBASIC3.15□□□□□ -1.91
CPNE3O75131 Z96811.1-201ENST00000445880 108 ntBASIC3.15□□□□□ -1.91
CPNE3O75131 RN7SL504P-201ENST00000494496 287 ntBASIC3.15□□□□□ -1.91
CPNE3O75131 Y_RNA.686-201ENST00000516548 134 ntBASIC3.15□□□□□ -1.91
CPNE3O75131 RNU6-365P-201ENST00000517113 106 ntBASIC3.15□□□□□ -1.91
CPNE3O75131 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CPNE3O75131 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
CPNE3O75131 AC017071.1-201ENST00000564407 2204 ntBASIC3.15□□□□□ -1.91
CPNE3O75131 AC093010.3-201ENST00000570269 15214 ntBASIC3.15□□□□□ -1.91
CPNE3O75131 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
CPNE3O75131 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
CPNE3O75131 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CPNE3O75131 Y_RNA.273-201ENST00000364703 102 ntBASIC3.14□□□□□ -1.91
CPNE3O75131 SNORA12.1-201ENST00000390873 148 ntBASIC3.14□□□□□ -1.91
CPNE3O75131 RN7SKP284-201ENST00000411002 343 ntBASIC3.14□□□□□ -1.91
CPNE3O75131 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.14□□□□□ -1.91
CPNE3O75131 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.14□□□□□ -1.91
CPNE3O75131 AL358944.1-201ENST00000528537 144 ntBASIC3.14□□□□□ -1.91
CPNE3O75131 Y_RNA.757-201ENST00000578934 114 ntBASIC3.14□□□□□ -1.91
CPNE3O75131 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CPNE3O75131 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CPNE3O75131 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.14□□□□□ -1.91
CPNE3O75131 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CPNE3O75131 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CPNE3O75131 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.13□□□□□ -1.91
CPNE3O75131 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CPNE3O75131 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
CPNE3O75131 U8.1-201ENST00000362843 134 ntBASIC3.13□□□□□ -1.91
CPNE3O75131 RNA5SP383-201ENST00000362934 120 ntBASIC3.13□□□□□ -1.91
CPNE3O75131 Y_RNA.81-201ENST00000362997 102 ntBASIC3.13□□□□□ -1.91
CPNE3O75131 CST2P1-201ENST00000425770 87 ntBASIC3.13□□□□□ -1.91
CPNE3O75131 TRIAP1P1-201ENST00000427062 225 ntBASIC3.13□□□□□ -1.91
CPNE3O75131 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.13□□□□□ -1.91
CPNE3O75131 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.13□□□□□ -1.91
CPNE3O75131 HMGN1P18-201ENST00000457642 277 ntBASIC3.13□□□□□ -1.91
CPNE3O75131 RNU7-94P-201ENST00000459576 63 ntBASIC3.13□□□□□ -1.91
CPNE3O75131 MRPS17P9-201ENST00000511924 393 ntBASIC3.13□□□□□ -1.91
CPNE3O75131 AC024995.1-201ENST00000523014 93 ntBASIC3.13□□□□□ -1.91
CPNE3O75131 MIR4325-201ENST00000583049 90 ntBASIC3.13□□□□□ -1.91
CPNE3O75131 AC131055.1-201ENST00000584626 316 ntBASIC3.13□□□□□ -1.91
CPNE3O75131 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.13□□□□□ -1.91
CPNE3O75131 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CPNE3O75131 MIR126-201ENST00000362291 85 ntBASIC3.12□□□□□ -1.91
CPNE3O75131 RNU6-862P-201ENST00000362804 105 ntBASIC3.12□□□□□ -1.91
CPNE3O75131 RNA5SP374-201ENST00000362939 125 ntBASIC3.12□□□□□ -1.91
CPNE3O75131 SNORD56.3-201ENST00000363507 71 ntBASIC3.12□□□□□ -1.91
CPNE3O75131 RNA5SP493-201ENST00000364115 91 ntBASIC3.12□□□□□ -1.91
CPNE3O75131 Y_RNA.353-201ENST00000365440 108 ntBASIC3.12□□□□□ -1.91
CPNE3O75131 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CPNE3O75131 MIR128-1-201ENST00000384921 82 ntBASIC3.12□□□□□ -1.91
CPNE3O75131 RPL39P40-201ENST00000445481 146 ntBASIC3.12□□□□□ -1.91
CPNE3O75131 RPS26P45-201ENST00000471748 340 ntBASIC3.12□□□□□ -1.91
CPNE3O75131 RNU6-659P-201ENST00000516454 104 ntBASIC3.12□□□□□ -1.91
CPNE3O75131 AC026271.5-201ENST00000577873 130 ntBASIC3.12□□□□□ -1.91
CPNE3O75131 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.12□□□□□ -1.91
CPNE3O75131 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CPNE3O75131 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CPNE3O75131 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CPNE3O75131 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CPNE3O75131 Y_RNA.66-201ENST00000362862 102 ntBASIC3.11□□□□□ -1.91
CPNE3O75131 RNU6-23P-201ENST00000363283 107 ntBASIC3.11□□□□□ -1.91
CPNE3O75131 Y_RNA.120-201ENST00000363304 110 ntBASIC3.11□□□□□ -1.91
CPNE3O75131 Y_RNA.294-201ENST00000364916 102 ntBASIC3.11□□□□□ -1.91
CPNE3O75131 SNORD20-201ENST00000384550 80 ntBASIC3.11□□□□□ -1.91
CPNE3O75131 SNORA48.2-201ENST00000390926 124 ntBASIC3.11□□□□□ -1.91
CPNE3O75131 AL031121.1-201ENST00000406553 254 ntBASIC3.11□□□□□ -1.91
CPNE3O75131 MLLT10P1-201ENST00000418346 262 ntBASIC3.11□□□□□ -1.91
CPNE3O75131 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.11□□□□□ -1.91
CPNE3O75131 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.11□□□□□ -1.91
CPNE3O75131 AL163195.1-201ENST00000496941 348 ntBASIC3.11□□□□□ -1.91
CPNE3O75131 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.11□□□□□ -1.91
CPNE3O75131 SNORA18.4-201ENST00000516440 124 ntBASIC3.11□□□□□ -1.91
CPNE3O75131 RNU6-504P-201ENST00000516568 104 ntBASIC3.11□□□□□ -1.91
CPNE3O75131 Y_RNA.692-201ENST00000516627 105 ntBASIC3.11□□□□□ -1.91
CPNE3O75131 Y_RNA.714-201ENST00000517065 90 ntBASIC3.11□□□□□ -1.91
CPNE3O75131 AC104027.1-201ENST00000521887 300 ntBASIC3.11□□□□□ -1.91
CPNE3O75131 AP002004.2-201ENST00000531656 154 ntBASIC3.11□□□□□ -1.91
CPNE3O75131 AC090049.2-201ENST00000550377 109 ntBASIC3.11□□□□□ -1.91
CPNE3O75131 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.11□□□□□ -1.91
CPNE3O75131 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.1□□□□□ -1.91
CPNE3O75131 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.1□□□□□ -1.91
CPNE3O75131 SNORA1B-201ENST00000362535 133 ntBASIC3.1□□□□□ -1.91
CPNE3O75131 SNORD115-3-201ENST00000363100 82 ntBASIC3.1□□□□□ -1.91
CPNE3O75131 SNORD18B-201ENST00000365659 72 ntBASIC3.1□□□□□ -1.91
CPNE3O75131 RNU7-107P-201ENST00000459121 61 ntBASIC3.1□□□□□ -1.91
CPNE3O75131 AL049830.1-201ENST00000468034 425 ntBASIC3.1□□□□□ -1.91
CPNE3O75131 AL049873.1-201ENST00000480540 376 ntBASIC3.1□□□□□ -1.91
CPNE3O75131 RN7SKP179-201ENST00000516126 217 ntBASIC3.1□□□□□ -1.91
CPNE3O75131 AL591926.4-201ENST00000616895 298 ntBASIC3.1□□□□□ -1.91
CPNE3O75131 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.1□□□□□ -1.91
CPNE3O75131 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CPNE3O75131 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms