Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 RNU6-740P-201ENST00000364734 105 ntBASIC2.24□□□□□ -2.05
SNX2O60749 Y_RNA.416-201ENST00000384014 113 ntBASIC2.24□□□□□ -2.05
SNX2O60749 SNORA70B-201ENST00000384210 135 ntBASIC2.24□□□□□ -2.05
SNX2O60749 Y_RNA.539-201ENST00000384635 107 ntBASIC2.24□□□□□ -2.05
SNX2O60749 MT-TG-201ENST00000387429 68 ntBASIC2.24□□□□□ -2.05
SNX2O60749 SNORA48.1-201ENST00000390879 135 ntBASIC2.24□□□□□ -2.05
SNX2O60749 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.24□□□□□ -2.05
SNX2O60749 RNA5SP425-201ENST00000410336 112 ntBASIC2.24□□□□□ -2.05
SNX2O60749 RNA5SP501-201ENST00000410990 112 ntBASIC2.24□□□□□ -2.05
SNX2O60749 AL135786.1-201ENST00000415892 214 ntBASIC2.24□□□□□ -2.05
SNX2O60749 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.24□□□□□ -2.05
SNX2O60749 AC099677.2-201ENST00000436385 175 ntBASIC2.24□□□□□ -2.05
SNX2O60749 ATP5J2P3-201ENST00000451550 258 ntBASIC2.24□□□□□ -2.05
SNX2O60749 SUMO1P2-201ENST00000452524 304 ntBASIC2.24□□□□□ -2.05
SNX2O60749 RPS26P55-201ENST00000471178 356 ntBASIC2.24□□□□□ -2.05
SNX2O60749 RNU6-1337P-201ENST00000516525 95 ntBASIC2.24□□□□□ -2.05
SNX2O60749 SNORA27.4-201ENST00000516650 95 ntBASIC2.24□□□□□ -2.05
SNX2O60749 RNU6-63P-201ENST00000516690 95 ntBASIC2.24□□□□□ -2.05
SNX2O60749 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.24□□□□□ -2.05
SNX2O60749 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.24□□□□□ -2.05
SNX2O60749 MIR5007-201ENST00000583098 95 ntBASIC2.24□□□□□ -2.05
SNX2O60749 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.24□□□□□ -2.05
SNX2O60749 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.24□□□□□ -2.05
SNX2O60749 CENPCP1-201ENST00000533085 2578 ntBASIC2.24□□□□□ -2.05
SNX2O60749 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SNX2O60749 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SNX2O60749 Y_RNA.44-201ENST00000362676 108 ntBASIC2.23□□□□□ -2.05
SNX2O60749 RNU6-862P-201ENST00000362804 105 ntBASIC2.23□□□□□ -2.05
SNX2O60749 RNU6-379P-201ENST00000363813 104 ntBASIC2.23□□□□□ -2.05
SNX2O60749 Y_RNA.352-201ENST00000365439 102 ntBASIC2.23□□□□□ -2.05
SNX2O60749 RNU6-514P-201ENST00000384208 107 ntBASIC2.23□□□□□ -2.05
SNX2O60749 SNORD116-13-201ENST00000384408 92 ntBASIC2.23□□□□□ -2.05
SNX2O60749 RNA5SP467-201ENST00000391274 118 ntBASIC2.23□□□□□ -2.05
SNX2O60749 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.23□□□□□ -2.05
SNX2O60749 RNU6-855P-201ENST00000410395 104 ntBASIC2.23□□□□□ -2.05
SNX2O60749 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.23□□□□□ -2.05
SNX2O60749 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.23□□□□□ -2.05
SNX2O60749 AC010409.1-201ENST00000487382 476 ntBASIC2.23□□□□□ -2.05
SNX2O60749 MIR3945-201ENST00000581853 98 ntBASIC2.23□□□□□ -2.05
SNX2O60749 MIR4438-201ENST00000585271 93 ntBASIC2.23□□□□□ -2.05
SNX2O60749 AL512605.2-201ENST00000592972 256 ntBASIC2.23□□□□□ -2.05
SNX2O60749 U6.73-201ENST00000619194 103 ntBASIC2.23□□□□□ -2.05
SNX2O60749 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SNX2O60749 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.23□□□□□ -2.05
SNX2O60749 ZNF720P1-201ENST00000562403 1939 ntBASIC2.23□□□□□ -2.05
SNX2O60749 SNORD114-7-201ENST00000362520 77 ntBASIC2.22□□□□□ -2.05
SNX2O60749 RNU6-271P-201ENST00000363858 105 ntBASIC2.22□□□□□ -2.05
SNX2O60749 RNU6-801P-201ENST00000364087 105 ntBASIC2.22□□□□□ -2.05
SNX2O60749 MIR221-201ENST00000385135 110 ntBASIC2.22□□□□□ -2.05
SNX2O60749 RNA5SP57-201ENST00000459463 123 ntBASIC2.22□□□□□ -2.05
SNX2O60749 SNORA70.12-201ENST00000516084 153 ntBASIC2.22□□□□□ -2.05
SNX2O60749 RNU6-1023P-201ENST00000516137 106 ntBASIC2.22□□□□□ -2.05
SNX2O60749 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.22□□□□□ -2.05
SNX2O60749 MIR4713-201ENST00000582691 75 ntBASIC2.22□□□□□ -2.05
SNX2O60749 AC002984.1-201ENST00000591692 448 ntBASIC2.22□□□□□ -2.05
SNX2O60749 AL353149.1-201ENST00000610667 244 ntBASIC2.22□□□□□ -2.05
SNX2O60749 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.22□□□□□ -2.05
SNX2O60749 AC006435.5-201ENST00000624486 112 ntBASIC2.22□□□□□ -2.05
SNX2O60749 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SNX2O60749 UBE2WP1-201ENST00000362030 340 ntBASIC2.21□□□□□ -2.06
SNX2O60749 RNU1-22P-201ENST00000363334 158 ntBASIC2.21□□□□□ -2.06
SNX2O60749 RNU6-1048P-201ENST00000364054 107 ntBASIC2.21□□□□□ -2.06
SNX2O60749 Y_RNA.217-201ENST00000364214 105 ntBASIC2.21□□□□□ -2.06
SNX2O60749 Y_RNA.275-201ENST00000364726 110 ntBASIC2.21□□□□□ -2.06
SNX2O60749 Y_RNA.310-201ENST00000365063 113 ntBASIC2.21□□□□□ -2.06
SNX2O60749 RNU6-136P-201ENST00000384663 107 ntBASIC2.21□□□□□ -2.06
SNX2O60749 MIR548H3-201ENST00000408771 118 ntBASIC2.21□□□□□ -2.06
SNX2O60749 RNU2-40P-201ENST00000410833 196 ntBASIC2.21□□□□□ -2.06
SNX2O60749 RNU2-14P-201ENST00000411053 191 ntBASIC2.21□□□□□ -2.06
SNX2O60749 AC009310.1-201ENST00000414414 451 ntBASIC2.21□□□□□ -2.06
SNX2O60749 HMGN2P19-201ENST00000425149 265 ntBASIC2.21□□□□□ -2.06
SNX2O60749 Y_RNA.641-201ENST00000459414 105 ntBASIC2.21□□□□□ -2.06
SNX2O60749 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.21□□□□□ -2.06
SNX2O60749 RNU6-111P-201ENST00000517179 105 ntBASIC2.21□□□□□ -2.06
SNX2O60749 RNU7-128P-201ENST00000517247 62 ntBASIC2.21□□□□□ -2.06
SNX2O60749 AL137100.2-201ENST00000555786 315 ntBASIC2.21□□□□□ -2.06
SNX2O60749 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.21□□□□□ -2.06
SNX2O60749 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.21□□□□□ -2.06
SNX2O60749 U6.108-201ENST00000637764 58 ntBASIC2.21□□□□□ -2.06
SNX2O60749 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
SNX2O60749 Y_RNA.20-201ENST00000362479 113 ntBASIC2.2□□□□□ -2.06
SNX2O60749 Y_RNA.76-201ENST00000362931 109 ntBASIC2.2□□□□□ -2.06
SNX2O60749 RNU1-96P-201ENST00000364163 162 ntBASIC2.2□□□□□ -2.06
SNX2O60749 SNORA20.1-201ENST00000364790 130 ntBASIC2.2□□□□□ -2.06
SNX2O60749 Y_RNA.341-201ENST00000365341 102 ntBASIC2.2□□□□□ -2.06
SNX2O60749 RNU6-117P-201ENST00000365415 107 ntBASIC2.2□□□□□ -2.06
SNX2O60749 Y_RNA.368-201ENST00000365547 113 ntBASIC2.2□□□□□ -2.06
SNX2O60749 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.2□□□□□ -2.06
SNX2O60749 RNU6-338P-201ENST00000383888 105 ntBASIC2.2□□□□□ -2.06
SNX2O60749 RNU6-1289P-201ENST00000384431 106 ntBASIC2.2□□□□□ -2.06
SNX2O60749 MIR676-201ENST00000390702 67 ntBASIC2.2□□□□□ -2.06
SNX2O60749 RNU6-1186P-201ENST00000410429 97 ntBASIC2.2□□□□□ -2.06
SNX2O60749 RN7SKP223-201ENST00000410582 62 ntBASIC2.2□□□□□ -2.06
SNX2O60749 AC024067.1-201ENST00000426199 223 ntBASIC2.2□□□□□ -2.06
SNX2O60749 AL356320.1-201ENST00000429616 163 ntBASIC2.2□□□□□ -2.06
SNX2O60749 AC018634.1-201ENST00000437554 401 ntBASIC2.2□□□□□ -2.06
SNX2O60749 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SNX2O60749 Y_RNA.637-201ENST00000459424 114 ntBASIC2.2□□□□□ -2.06
SNX2O60749 AC097462.1-201ENST00000514125 324 ntBASIC2.2□□□□□ -2.06
SNX2O60749 RNU6-1146P-201ENST00000516282 102 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms