Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 MIR27B-201ENST00000385129 97 ntBASIC3.32□□□□□ -1.88
GRIN3BO60391 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.32□□□□□ -1.88
GRIN3BO60391 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.32□□□□□ -1.88
GRIN3BO60391 UQCRHP3-201ENST00000451503 251 ntBASIC3.32□□□□□ -1.88
GRIN3BO60391 RNU7-141P-201ENST00000459304 62 ntBASIC3.32□□□□□ -1.88
GRIN3BO60391 AC010598.1-201ENST00000510378 103 ntBASIC3.32□□□□□ -1.88
GRIN3BO60391 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.32□□□□□ -1.88
GRIN3BO60391 AC069294.1-201ENST00000608397 350 ntBASIC3.32□□□□□ -1.88
GRIN3BO60391 AC046143.2-201ENST00000609789 160 ntBASIC3.32□□□□□ -1.88
GRIN3BO60391 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.32□□□□□ -1.88
GRIN3BO60391 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
GRIN3BO60391 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
GRIN3BO60391 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
GRIN3BO60391 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
GRIN3BO60391 SNORA27.1-201ENST00000362604 124 ntBASIC3.31□□□□□ -1.88
GRIN3BO60391 Y_RNA.172-201ENST00000363765 102 ntBASIC3.31□□□□□ -1.88
GRIN3BO60391 RNU6-1048P-201ENST00000364054 107 ntBASIC3.31□□□□□ -1.88
GRIN3BO60391 MIR539-201ENST00000365690 78 ntBASIC3.31□□□□□ -1.88
GRIN3BO60391 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
GRIN3BO60391 RPL32P35-201ENST00000415214 394 ntBASIC3.31□□□□□ -1.88
GRIN3BO60391 AC009969.1-201ENST00000438726 172 ntBASIC3.31□□□□□ -1.88
GRIN3BO60391 RPS27P29-201ENST00000463110 252 ntBASIC3.31□□□□□ -1.88
GRIN3BO60391 RNA5SP445-201ENST00000515889 115 ntBASIC3.31□□□□□ -1.88
GRIN3BO60391 RNU6-168P-201ENST00000516189 101 ntBASIC3.31□□□□□ -1.88
GRIN3BO60391 RNU6-948P-201ENST00000516374 107 ntBASIC3.31□□□□□ -1.88
GRIN3BO60391 RNU2-34P-201ENST00000516534 121 ntBASIC3.31□□□□□ -1.88
GRIN3BO60391 MIR3199-1-201ENST00000582434 88 ntBASIC3.31□□□□□ -1.88
GRIN3BO60391 AC023043.3-201ENST00000593113 385 ntBASIC3.31□□□□□ -1.88
GRIN3BO60391 MIR5739-201ENST00000619803 80 ntBASIC3.31□□□□□ -1.88
GRIN3BO60391 U4.3-201ENST00000621047 82 ntBASIC3.31□□□□□ -1.88
GRIN3BO60391 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.31□□□□□ -1.88
GRIN3BO60391 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
GRIN3BO60391 FAM35CP-201ENST00000554755 2470 ntBASIC3.3□□□□□ -1.88
GRIN3BO60391 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
GRIN3BO60391 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.3□□□□□ -1.88
GRIN3BO60391 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
GRIN3BO60391 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
GRIN3BO60391 Y_RNA.293-201ENST00000364908 93 ntBASIC3.3□□□□□ -1.88
GRIN3BO60391 RNU6-1235P-201ENST00000384559 107 ntBASIC3.3□□□□□ -1.88
GRIN3BO60391 SNORA46-201ENST00000384762 135 ntBASIC3.3□□□□□ -1.88
GRIN3BO60391 RPL21P3-201ENST00000395517 478 ntBASIC3.3□□□□□ -1.88
GRIN3BO60391 AC007064.1-201ENST00000412238 351 ntBASIC3.3□□□□□ -1.88
GRIN3BO60391 SNORD65B-201ENST00000459126 73 ntBASIC3.3□□□□□ -1.88
GRIN3BO60391 RNU6-498P-201ENST00000459468 107 ntBASIC3.3□□□□□ -1.88
GRIN3BO60391 RPL36AP21-201ENST00000490372 323 ntBASIC3.3□□□□□ -1.88
GRIN3BO60391 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.3□□□□□ -1.88
GRIN3BO60391 RNA5SP282-201ENST00000516355 108 ntBASIC3.3□□□□□ -1.88
GRIN3BO60391 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.3□□□□□ -1.88
GRIN3BO60391 AC022616.8-201ENST00000533569 253 ntBASIC3.3□□□□□ -1.88
GRIN3BO60391 MIR4744-201ENST00000581563 82 ntBASIC3.3□□□□□ -1.88
GRIN3BO60391 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.3□□□□□ -1.88
GRIN3BO60391 AC006435.5-201ENST00000624486 112 ntBASIC3.3□□□□□ -1.88
GRIN3BO60391 AC093831.2-201ENST00000624393 3427 ntBASIC3.29□□□□□ -1.88
GRIN3BO60391 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.29□□□□□ -1.88
GRIN3BO60391 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
GRIN3BO60391 Y_RNA.124-201ENST00000363339 93 ntBASIC3.29□□□□□ -1.88
GRIN3BO60391 RNU6-1205P-201ENST00000363625 106 ntBASIC3.29□□□□□ -1.88
GRIN3BO60391 MIR218-1-201ENST00000384999 110 ntBASIC3.29□□□□□ -1.88
GRIN3BO60391 RPS26P55-201ENST00000471178 356 ntBASIC3.29□□□□□ -1.88
GRIN3BO60391 RNU6-1053P-201ENST00000515930 101 ntBASIC3.29□□□□□ -1.88
GRIN3BO60391 Y_RNA.797-201ENST00000515977 94 ntBASIC3.29□□□□□ -1.88
GRIN3BO60391 AC245166.1-201ENST00000521012 253 ntBASIC3.29□□□□□ -1.88
GRIN3BO60391 AC093331.1-201ENST00000521474 169 ntBASIC3.29□□□□□ -1.88
GRIN3BO60391 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.29□□□□□ -1.88
GRIN3BO60391 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
GRIN3BO60391 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
GRIN3BO60391 snoU2_19.4-201ENST00000364329 80 ntBASIC3.28□□□□□ -1.88
GRIN3BO60391 SNORD114-30-201ENST00000364448 72 ntBASIC3.28□□□□□ -1.88
GRIN3BO60391 SNORA22-201ENST00000383907 134 ntBASIC3.28□□□□□ -1.88
GRIN3BO60391 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
GRIN3BO60391 RNU6-578P-201ENST00000390980 103 ntBASIC3.28□□□□□ -1.88
GRIN3BO60391 RNU6-460P-201ENST00000391158 108 ntBASIC3.28□□□□□ -1.88
GRIN3BO60391 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.28□□□□□ -1.88
GRIN3BO60391 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
GRIN3BO60391 RPL23AP58-201ENST00000440453 469 ntBASIC3.28□□□□□ -1.88
GRIN3BO60391 CYP2C59P-201ENST00000457790 269 ntBASIC3.28□□□□□ -1.88
GRIN3BO60391 RPL23AP42-201ENST00000471152 471 ntBASIC3.28□□□□□ -1.88
GRIN3BO60391 AC092991.1-201ENST00000477176 376 ntBASIC3.28□□□□□ -1.88
GRIN3BO60391 AC108729.3-201ENST00000513484 108 ntBASIC3.28□□□□□ -1.88
GRIN3BO60391 RNU6-1337P-201ENST00000516525 95 ntBASIC3.28□□□□□ -1.88
GRIN3BO60391 Y_RNA.712-201ENST00000517011 92 ntBASIC3.28□□□□□ -1.88
GRIN3BO60391 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.28□□□□□ -1.88
GRIN3BO60391 MIR4431-201ENST00000579990 94 ntBASIC3.28□□□□□ -1.88
GRIN3BO60391 DNAJC19P2-201ENST00000593340 302 ntBASIC3.28□□□□□ -1.88
GRIN3BO60391 AP000942.3-201ENST00000603702 160 ntBASIC3.28□□□□□ -1.88
GRIN3BO60391 AL391903.3-201ENST00000612158 163 ntBASIC3.28□□□□□ -1.88
GRIN3BO60391 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.28□□□□□ -1.88
GRIN3BO60391 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
GRIN3BO60391 RNU6-546P-201ENST00000383991 107 ntBASIC3.27□□□□□ -1.89
GRIN3BO60391 MIR616-201ENST00000385293 97 ntBASIC3.27□□□□□ -1.89
GRIN3BO60391 FO393413.1-201ENST00000402892 195 ntBASIC3.27□□□□□ -1.89
GRIN3BO60391 RNU6-57P-201ENST00000411348 103 ntBASIC3.27□□□□□ -1.89
GRIN3BO60391 AC008134.1-201ENST00000420943 193 ntBASIC3.27□□□□□ -1.89
GRIN3BO60391 AC063976.4-201ENST00000421971 163 ntBASIC3.27□□□□□ -1.89
GRIN3BO60391 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.27□□□□□ -1.89
GRIN3BO60391 AL161788.1-201ENST00000441805 169 ntBASIC3.27□□□□□ -1.89
GRIN3BO60391 RN7SL75P-201ENST00000461926 281 ntBASIC3.27□□□□□ -1.89
GRIN3BO60391 AC090515.1-201ENST00000465295 476 ntBASIC3.27□□□□□ -1.89
GRIN3BO60391 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.27□□□□□ -1.89
GRIN3BO60391 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms