Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MIR30E-201ENST00000362104 92 ntBASIC3.96□□□□□ -1.78
ACTN4O43707 RNU1-72P-201ENST00000362976 153 ntBASIC3.96□□□□□ -1.78
ACTN4O43707 Y_RNA.454-201ENST00000384224 113 ntBASIC3.96□□□□□ -1.78
ACTN4O43707 RNU6-675P-201ENST00000384236 104 ntBASIC3.96□□□□□ -1.78
ACTN4O43707 MIR184-201ENST00000384962 84 ntBASIC3.96□□□□□ -1.78
ACTN4O43707 AC123900.1-201ENST00000420390 96 ntBASIC3.96□□□□□ -1.78
ACTN4O43707 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.96□□□□□ -1.78
ACTN4O43707 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
ACTN4O43707 AL031183.1-201ENST00000457667 207 ntBASIC3.96□□□□□ -1.78
ACTN4O43707 SNRPGP3-201ENST00000469405 227 ntBASIC3.96□□□□□ -1.78
ACTN4O43707 RNU2-27P-201ENST00000516185 142 ntBASIC3.96□□□□□ -1.78
ACTN4O43707 RNU7-128P-201ENST00000517247 62 ntBASIC3.96□□□□□ -1.78
ACTN4O43707 NDUFB9P3-201ENST00000521269 501 ntBASIC3.96□□□□□ -1.78
ACTN4O43707 MIR3186-201ENST00000577404 85 ntBASIC3.96□□□□□ -1.78
ACTN4O43707 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.96□□□□□ -1.78
ACTN4O43707 AC002546.1-201ENST00000588041 2504 ntBASIC3.96□□□□□ -1.78
ACTN4O43707 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ACTN4O43707 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
ACTN4O43707 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.96□□□□□ -1.78
ACTN4O43707 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ACTN4O43707 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ACTN4O43707 snoU2-30.2-201ENST00000362805 70 ntBASIC3.95□□□□□ -1.78
ACTN4O43707 RNU6-832P-201ENST00000363319 107 ntBASIC3.95□□□□□ -1.78
ACTN4O43707 RNU6-546P-201ENST00000383991 107 ntBASIC3.95□□□□□ -1.78
ACTN4O43707 SNORD116-22-201ENST00000384430 92 ntBASIC3.95□□□□□ -1.78
ACTN4O43707 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
ACTN4O43707 SNORA57.1-201ENST00000391227 145 ntBASIC3.95□□□□□ -1.78
ACTN4O43707 RNU6-402P-201ENST00000410678 103 ntBASIC3.95□□□□□ -1.78
ACTN4O43707 RNU2-37P-201ENST00000410695 177 ntBASIC3.95□□□□□ -1.78
ACTN4O43707 RNU6-733P-201ENST00000410759 104 ntBASIC3.95□□□□□ -1.78
ACTN4O43707 AL049830.1-201ENST00000468034 425 ntBASIC3.95□□□□□ -1.78
ACTN4O43707 PHBP14-201ENST00000512887 367 ntBASIC3.95□□□□□ -1.78
ACTN4O43707 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.95□□□□□ -1.78
ACTN4O43707 MIR5588-201ENST00000581890 63 ntBASIC3.95□□□□□ -1.78
ACTN4O43707 AC087741.2-201ENST00000619415 172 ntBASIC3.95□□□□□ -1.78
ACTN4O43707 AP003355.3-201ENST00000623465 114 ntBASIC3.95□□□□□ -1.78
ACTN4O43707 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ACTN4O43707 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ACTN4O43707 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
ACTN4O43707 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ACTN4O43707 RNU6-1084P-201ENST00000362498 107 ntBASIC3.94□□□□□ -1.78
ACTN4O43707 RNU4-16P-201ENST00000364737 141 ntBASIC3.94□□□□□ -1.78
ACTN4O43707 SNORA14A-201ENST00000364773 135 ntBASIC3.94□□□□□ -1.78
ACTN4O43707 Y_RNA.360-201ENST00000365512 102 ntBASIC3.94□□□□□ -1.78
ACTN4O43707 RNU6-979P-201ENST00000383896 107 ntBASIC3.94□□□□□ -1.78
ACTN4O43707 RNU6-409P-201ENST00000384114 104 ntBASIC3.94□□□□□ -1.78
ACTN4O43707 MIR577-201ENST00000385196 96 ntBASIC3.94□□□□□ -1.78
ACTN4O43707 MRPL35P3-201ENST00000421557 364 ntBASIC3.94□□□□□ -1.78
ACTN4O43707 AL357552.1-201ENST00000445254 415 ntBASIC3.94□□□□□ -1.78
ACTN4O43707 AC106707.2-201ENST00000484182 374 ntBASIC3.94□□□□□ -1.78
ACTN4O43707 AC093259.1-201ENST00000509755 300 ntBASIC3.94□□□□□ -1.78
ACTN4O43707 RNU6-857P-201ENST00000515893 110 ntBASIC3.94□□□□□ -1.78
ACTN4O43707 MIR2276-201ENST00000516886 89 ntBASIC3.94□□□□□ -1.78
ACTN4O43707 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.94□□□□□ -1.78
ACTN4O43707 MIR3618-201ENST00000580330 88 ntBASIC3.94□□□□□ -1.78
ACTN4O43707 U4.6-201ENST00000621618 127 ntBASIC3.94□□□□□ -1.78
ACTN4O43707 AC091932.4-201ENST00000623386 200 ntBASIC3.94□□□□□ -1.78
ACTN4O43707 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ACTN4O43707 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.94□□□□□ -1.78
ACTN4O43707 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ACTN4O43707 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.94□□□□□ -1.78
ACTN4O43707 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ACTN4O43707 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
ACTN4O43707 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
ACTN4O43707 MFSD8-233ENST00000641482 4860 ntBASIC3.93□□□□□ -1.78
ACTN4O43707 AC008264.2-201ENST00000610193 3731 ntBASIC3.93□□□□□ -1.78
ACTN4O43707 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.93□□□□□ -1.78
ACTN4O43707 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.93□□□□□ -1.78
ACTN4O43707 RNU6-661P-201ENST00000362409 107 ntBASIC3.93□□□□□ -1.78
ACTN4O43707 RNU6-363P-201ENST00000362895 105 ntBASIC3.93□□□□□ -1.78
ACTN4O43707 Y_RNA.96-201ENST00000363092 109 ntBASIC3.93□□□□□ -1.78
ACTN4O43707 Y_RNA.437-201ENST00000384113 113 ntBASIC3.93□□□□□ -1.78
ACTN4O43707 SNORA18-201ENST00000384416 132 ntBASIC3.93□□□□□ -1.78
ACTN4O43707 RNA5SP467-201ENST00000391274 118 ntBASIC3.93□□□□□ -1.78
ACTN4O43707 ARF4P2-201ENST00000430209 526 ntBASIC3.93□□□□□ -1.78
ACTN4O43707 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.93□□□□□ -1.78
ACTN4O43707 AC110768.1-201ENST00000509222 400 ntBASIC3.93□□□□□ -1.78
ACTN4O43707 AP003484.1-201ENST00000530974 250 ntBASIC3.93□□□□□ -1.78
ACTN4O43707 HSPE1P19-201ENST00000603327 295 ntBASIC3.93□□□□□ -1.78
ACTN4O43707 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.93□□□□□ -1.78
ACTN4O43707 MIR203B-201ENST00000636080 86 ntBASIC3.93□□□□□ -1.78
ACTN4O43707 AC012442.3-202ENST00000636742 206 ntBASIC3.93□□□□□ -1.78
ACTN4O43707 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ACTN4O43707 ICE2P2-201ENST00000483823 2787 ntBASIC3.93□□□□□ -1.78
ACTN4O43707 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
ACTN4O43707 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
ACTN4O43707 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ACTN4O43707 PWAR6-201ENST00000552334 4618 ntBASIC3.93□□□□□ -1.78
ACTN4O43707 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.93□□□□□ -1.78
ACTN4O43707 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ACTN4O43707 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ACTN4O43707 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ACTN4O43707 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ACTN4O43707 SNORD68-201ENST00000363214 84 ntBASIC3.92□□□□□ -1.78
ACTN4O43707 RNU6-268P-201ENST00000364174 107 ntBASIC3.92□□□□□ -1.78
ACTN4O43707 Y_RNA.313-201ENST00000365095 103 ntBASIC3.92□□□□□ -1.78
ACTN4O43707 Y_RNA.332-201ENST00000365271 113 ntBASIC3.92□□□□□ -1.78
ACTN4O43707 BTF3P4-201ENST00000418852 495 ntBASIC3.92□□□□□ -1.78
ACTN4O43707 AL035423.1-201ENST00000420331 213 ntBASIC3.92□□□□□ -1.78
ACTN4O43707 AC009969.1-201ENST00000438726 172 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms