Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC092435.3-201ENST00000565538 3654 ntBASIC3.89□□□□□ -1.79
HOXA2O43364 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXA2O43364 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA2O43364 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA2O43364 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA2O43364 SNORD14E-201ENST00000364009 85 ntBASIC3.88□□□□□ -1.79
HOXA2O43364 RNA5SP323-201ENST00000391094 133 ntBASIC3.88□□□□□ -1.79
HOXA2O43364 RNU7-94P-201ENST00000459576 63 ntBASIC3.88□□□□□ -1.79
HOXA2O43364 AC010401.1-201ENST00000463867 348 ntBASIC3.88□□□□□ -1.79
HOXA2O43364 AL049830.1-201ENST00000468034 425 ntBASIC3.88□□□□□ -1.79
HOXA2O43364 RNU6-1041P-201ENST00000516254 102 ntBASIC3.88□□□□□ -1.79
HOXA2O43364 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXA2O43364 AC141557.1-201ENST00000540982 400 ntBASIC3.88□□□□□ -1.79
HOXA2O43364 AL356280.1-201ENST00000603614 379 ntBASIC3.88□□□□□ -1.79
HOXA2O43364 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA2O43364 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA2O43364 RNU6-349P-201ENST00000362402 107 ntBASIC3.87□□□□□ -1.79
HOXA2O43364 SNORD115-28-201ENST00000363931 81 ntBASIC3.87□□□□□ -1.79
HOXA2O43364 Y_RNA.298-201ENST00000364960 107 ntBASIC3.87□□□□□ -1.79
HOXA2O43364 RNY1P6-201ENST00000384193 109 ntBASIC3.87□□□□□ -1.79
HOXA2O43364 TRIAP1P1-201ENST00000427062 225 ntBASIC3.87□□□□□ -1.79
HOXA2O43364 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXA2O43364 SEM1P1-201ENST00000506694 209 ntBASIC3.87□□□□□ -1.79
HOXA2O43364 SUMO2P16-201ENST00000519475 264 ntBASIC3.87□□□□□ -1.79
HOXA2O43364 AC084364.2-201ENST00000546924 395 ntBASIC3.87□□□□□ -1.79
HOXA2O43364 AL353149.1-201ENST00000610667 244 ntBASIC3.87□□□□□ -1.79
HOXA2O43364 AC006441.5-201ENST00000612680 209 ntBASIC3.87□□□□□ -1.79
HOXA2O43364 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXA2O43364 MIR338-201ENST00000636369 67 ntBASIC3.87□□□□□ -1.79
HOXA2O43364 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA2O43364 SNORA1B-201ENST00000362535 133 ntBASIC3.86□□□□□ -1.79
HOXA2O43364 RNU1-133P-201ENST00000364867 167 ntBASIC3.86□□□□□ -1.79
HOXA2O43364 MIR513A2-201ENST00000385249 127 ntBASIC3.86□□□□□ -1.79
HOXA2O43364 RNU2-63P-201ENST00000410792 194 ntBASIC3.86□□□□□ -1.79
HOXA2O43364 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXA2O43364 RNU7-164P-201ENST00000459221 62 ntBASIC3.86□□□□□ -1.79
HOXA2O43364 AC025445.1-201ENST00000502728 300 ntBASIC3.86□□□□□ -1.79
HOXA2O43364 RNU2-27P-201ENST00000516185 142 ntBASIC3.86□□□□□ -1.79
HOXA2O43364 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA2O43364 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXA2O43364 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA2O43364 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA2O43364 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA2O43364 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA2O43364 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXA2O43364 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
HOXA2O43364 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXA2O43364 MTATP8P2-201ENST00000435212 202 ntBASIC3.85□□□□□ -1.79
HOXA2O43364 RNU7-25P-201ENST00000516544 62 ntBASIC3.85□□□□□ -1.79
HOXA2O43364 SNORA70.18-201ENST00000516696 98 ntBASIC3.85□□□□□ -1.79
HOXA2O43364 RNU6-579P-201ENST00000516879 102 ntBASIC3.85□□□□□ -1.79
HOXA2O43364 MIR3163-201ENST00000581592 73 ntBASIC3.85□□□□□ -1.79
HOXA2O43364 AC062037.1-201ENST00000605302 128 ntBASIC3.85□□□□□ -1.79
HOXA2O43364 MIR3651-201ENST00000630427 90 ntBASIC3.85□□□□□ -1.79
HOXA2O43364 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.85□□□□□ -1.79
HOXA2O43364 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXA2O43364 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
HOXA2O43364 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
HOXA2O43364 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HOXA2O43364 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXA2O43364 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXA2O43364 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXA2O43364 RNU4-35P-201ENST00000362588 141 ntBASIC3.84□□□□□ -1.79
HOXA2O43364 Y_RNA.37-201ENST00000362606 108 ntBASIC3.84□□□□□ -1.79
HOXA2O43364 SNORD68-201ENST00000363214 84 ntBASIC3.84□□□□□ -1.79
HOXA2O43364 MIR515-2-201ENST00000384883 83 ntBASIC3.84□□□□□ -1.79
HOXA2O43364 MIR515-1-201ENST00000384884 83 ntBASIC3.84□□□□□ -1.79
HOXA2O43364 MIR548D2-201ENST00000384955 97 ntBASIC3.84□□□□□ -1.79
HOXA2O43364 SNORA19.1-201ENST00000410656 129 ntBASIC3.84□□□□□ -1.79
HOXA2O43364 RNA5SP120-201ENST00000410900 112 ntBASIC3.84□□□□□ -1.79
HOXA2O43364 AC099677.2-201ENST00000436385 175 ntBASIC3.84□□□□□ -1.79
HOXA2O43364 SNORD115-40-201ENST00000606510 82 ntBASIC3.84□□□□□ -1.79
HOXA2O43364 U6.108-201ENST00000637764 58 ntBASIC3.84□□□□□ -1.79
HOXA2O43364 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXA2O43364 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
HOXA2O43364 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
HOXA2O43364 MFSD8-233ENST00000641482 4860 ntBASIC3.83□□□□□ -1.8
HOXA2O43364 RNU6-1084P-201ENST00000362498 107 ntBASIC3.83□□□□□ -1.8
HOXA2O43364 SNORA38.1-201ENST00000364172 131 ntBASIC3.83□□□□□ -1.8
HOXA2O43364 RNY1P7-201ENST00000384743 110 ntBASIC3.83□□□□□ -1.8
HOXA2O43364 RN7SKP111-201ENST00000410349 271 ntBASIC3.83□□□□□ -1.8
HOXA2O43364 RNA5SP306-201ENST00000411087 107 ntBASIC3.83□□□□□ -1.8
HOXA2O43364 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXA2O43364 AC005326.1-201ENST00000429197 123 ntBASIC3.83□□□□□ -1.8
HOXA2O43364 BX510359.1-201ENST00000456973 237 ntBASIC3.83□□□□□ -1.8
HOXA2O43364 RNU6-904P-201ENST00000516206 101 ntBASIC3.83□□□□□ -1.8
HOXA2O43364 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXA2O43364 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXA2O43364 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
HOXA2O43364 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXA2O43364 snoU2-30.1-201ENST00000365012 70 ntBASIC3.82□□□□□ -1.8
HOXA2O43364 Y_RNA.344-201ENST00000365381 112 ntBASIC3.82□□□□□ -1.8
HOXA2O43364 SNORA8-201ENST00000384574 139 ntBASIC3.82□□□□□ -1.8
HOXA2O43364 MIR1289-1-201ENST00000408836 144 ntBASIC3.82□□□□□ -1.8
HOXA2O43364 RNU2-48P-201ENST00000410694 191 ntBASIC3.82□□□□□ -1.8
HOXA2O43364 Z92545.1-201ENST00000411782 234 ntBASIC3.82□□□□□ -1.8
HOXA2O43364 AL445646.1-201ENST00000431784 216 ntBASIC3.82□□□□□ -1.8
HOXA2O43364 AC025518.1-201ENST00000479856 347 ntBASIC3.82□□□□□ -1.8
HOXA2O43364 AC023141.11-201ENST00000508864 202 ntBASIC3.82□□□□□ -1.8
HOXA2O43364 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms