Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.11□□□□□ -2.07
PCDH17O14917 AC015712.3-201ENST00000559380 164 ntBASIC2.11□□□□□ -2.07
PCDH17O14917 MIR4287-201ENST00000579398 78 ntBASIC2.11□□□□□ -2.07
PCDH17O14917 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.1□□□□□ -2.07
PCDH17O14917 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
PCDH17O14917 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
PCDH17O14917 AL359851.1-201ENST00000569460 4997 ntBASIC2.1□□□□□ -2.07
PCDH17O14917 RNU6-326P-201ENST00000365480 107 ntBASIC2.1□□□□□ -2.07
PCDH17O14917 RNU6-376P-201ENST00000384731 106 ntBASIC2.1□□□□□ -2.07
PCDH17O14917 MIR562-201ENST00000384894 95 ntBASIC2.1□□□□□ -2.07
PCDH17O14917 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PCDH17O14917 RNU6-1203P-201ENST00000410703 110 ntBASIC2.1□□□□□ -2.07
PCDH17O14917 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.1□□□□□ -2.07
PCDH17O14917 AL158823.1-201ENST00000418441 478 ntBASIC2.1□□□□□ -2.07
PCDH17O14917 EBAG9P1-201ENST00000418955 543 ntBASIC2.1□□□□□ -2.07
PCDH17O14917 RPS26P45-201ENST00000471748 340 ntBASIC2.1□□□□□ -2.07
PCDH17O14917 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.1□□□□□ -2.07
PCDH17O14917 AC098869.1-201ENST00000481627 292 ntBASIC2.1□□□□□ -2.07
PCDH17O14917 RNVU1-2-201ENST00000516326 135 ntBASIC2.1□□□□□ -2.07
PCDH17O14917 RNU6-570P-201ENST00000517051 105 ntBASIC2.1□□□□□ -2.07
PCDH17O14917 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.1□□□□□ -2.07
PCDH17O14917 DEFB117-201ENST00000602356 141 ntBASIC2.1□□□□□ -2.07
PCDH17O14917 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.1□□□□□ -2.07
PCDH17O14917 MIR219B-201ENST00000637023 88 ntBASIC2.1□□□□□ -2.07
PCDH17O14917 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
PCDH17O14917 ZNF702P-202ENST00000434269 1966 ntBASIC2.09□□□□□ -2.07
PCDH17O14917 RNU6-196P-201ENST00000384315 107 ntBASIC2.09□□□□□ -2.07
PCDH17O14917 Y_RNA.541-201ENST00000384640 113 ntBASIC2.09□□□□□ -2.07
PCDH17O14917 MIR17-201ENST00000385012 84 ntBASIC2.09□□□□□ -2.07
PCDH17O14917 MIR764-201ENST00000390811 85 ntBASIC2.09□□□□□ -2.07
PCDH17O14917 RNA5SP467-201ENST00000391274 118 ntBASIC2.09□□□□□ -2.07
PCDH17O14917 RNU6-855P-201ENST00000410395 104 ntBASIC2.09□□□□□ -2.07
PCDH17O14917 AL356379.1-201ENST00000414105 126 ntBASIC2.09□□□□□ -2.07
PCDH17O14917 RNA5SP233-201ENST00000459153 113 ntBASIC2.09□□□□□ -2.07
PCDH17O14917 AC108210.2-201ENST00000503681 201 ntBASIC2.09□□□□□ -2.07
PCDH17O14917 AL161670.1-201ENST00000554348 137 ntBASIC2.09□□□□□ -2.07
PCDH17O14917 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.09□□□□□ -2.07
PCDH17O14917 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.09□□□□□ -2.07
PCDH17O14917 AP000553.5-201ENST00000641933 54 ntBASIC2.09□□□□□ -2.07
PCDH17O14917 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
PCDH17O14917 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
PCDH17O14917 SNORA16B-201ENST00000364674 135 ntBASIC2.08□□□□□ -2.08
PCDH17O14917 Y_RNA.376-201ENST00000365638 108 ntBASIC2.08□□□□□ -2.08
PCDH17O14917 Y_RNA.512-201ENST00000384518 102 ntBASIC2.08□□□□□ -2.08
PCDH17O14917 MIR215-201ENST00000384858 110 ntBASIC2.08□□□□□ -2.08
PCDH17O14917 MIR520A-201ENST00000384862 85 ntBASIC2.08□□□□□ -2.08
PCDH17O14917 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PCDH17O14917 HMGN1P10-201ENST00000474557 553 ntBASIC2.08□□□□□ -2.08
PCDH17O14917 RNU6-1337P-201ENST00000516525 95 ntBASIC2.08□□□□□ -2.08
PCDH17O14917 SCARNA16.3-201ENST00000516595 184 ntBASIC2.08□□□□□ -2.08
PCDH17O14917 SUB1P4-201ENST00000566062 339 ntBASIC2.08□□□□□ -2.08
PCDH17O14917 AC073413.2-201ENST00000604332 360 ntBASIC2.08□□□□□ -2.08
PCDH17O14917 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.08□□□□□ -2.08
PCDH17O14917 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PCDH17O14917 RNU4-80P-201ENST00000363200 141 ntBASIC2.07□□□□□ -2.08
PCDH17O14917 SNORA33-201ENST00000363664 130 ntBASIC2.07□□□□□ -2.08
PCDH17O14917 Y_RNA.288-201ENST00000364854 92 ntBASIC2.07□□□□□ -2.08
PCDH17O14917 Y_RNA.418-201ENST00000384029 102 ntBASIC2.07□□□□□ -2.08
PCDH17O14917 RNU6-482P-201ENST00000391068 107 ntBASIC2.07□□□□□ -2.08
PCDH17O14917 RNA5SP57-201ENST00000459463 123 ntBASIC2.07□□□□□ -2.08
PCDH17O14917 RPL36AP21-201ENST00000490372 323 ntBASIC2.07□□□□□ -2.08
PCDH17O14917 RNU6-1338P-201ENST00000516328 91 ntBASIC2.07□□□□□ -2.08
PCDH17O14917 RNU7-128P-201ENST00000517247 62 ntBASIC2.07□□□□□ -2.08
PCDH17O14917 AC084364.2-201ENST00000546924 395 ntBASIC2.07□□□□□ -2.08
PCDH17O14917 MIR4448-201ENST00000584360 86 ntBASIC2.07□□□□□ -2.08
PCDH17O14917 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.07□□□□□ -2.08
PCDH17O14917 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
PCDH17O14917 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
PCDH17O14917 AL356292.1-201ENST00000283110 373 ntBASIC2.06□□□□□ -2.08
PCDH17O14917 Y_RNA.144-201ENST00000363521 113 ntBASIC2.06□□□□□ -2.08
PCDH17O14917 RNU4-13P-201ENST00000364019 141 ntBASIC2.06□□□□□ -2.08
PCDH17O14917 RNU6-117P-201ENST00000365415 107 ntBASIC2.06□□□□□ -2.08
PCDH17O14917 Y_RNA.368-201ENST00000365547 113 ntBASIC2.06□□□□□ -2.08
PCDH17O14917 Y_RNA.456-201ENST00000384232 111 ntBASIC2.06□□□□□ -2.08
PCDH17O14917 Y_RNA.518-201ENST00000384552 113 ntBASIC2.06□□□□□ -2.08
PCDH17O14917 MIR520G-201ENST00000385064 90 ntBASIC2.06□□□□□ -2.08
PCDH17O14917 MIR221-201ENST00000385135 110 ntBASIC2.06□□□□□ -2.08
PCDH17O14917 RNA5SP212-201ENST00000391223 107 ntBASIC2.06□□□□□ -2.08
PCDH17O14917 AC245047.4-201ENST00000433189 144 ntBASIC2.06□□□□□ -2.08
PCDH17O14917 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.06□□□□□ -2.08
PCDH17O14917 SERF1AP1-201ENST00000514575 187 ntBASIC2.06□□□□□ -2.08
PCDH17O14917 RNA5SP481-201ENST00000516814 122 ntBASIC2.06□□□□□ -2.08
PCDH17O14917 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.06□□□□□ -2.08
PCDH17O14917 MIR3145-201ENST00000580727 82 ntBASIC2.06□□□□□ -2.08
PCDH17O14917 AC002984.1-201ENST00000591692 448 ntBASIC2.06□□□□□ -2.08
PCDH17O14917 7SK.10-201ENST00000621414 298 ntBASIC2.06□□□□□ -2.08
PCDH17O14917 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PCDH17O14917 AC018630.2-201ENST00000534866 2403 ntBASIC2.05□□□□□ -2.08
PCDH17O14917 AL391987.6-201ENST00000305671 199 ntBASIC2.05□□□□□ -2.08
PCDH17O14917 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PCDH17O14917 MIR335-201ENST00000362173 94 ntBASIC2.05□□□□□ -2.08
PCDH17O14917 RNA5SP276-201ENST00000362580 94 ntBASIC2.05□□□□□ -2.08
PCDH17O14917 Y_RNA.341-201ENST00000365341 102 ntBASIC2.05□□□□□ -2.08
PCDH17O14917 RNU6-950P-201ENST00000384651 107 ntBASIC2.05□□□□□ -2.08
PCDH17O14917 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.05□□□□□ -2.08
PCDH17O14917 RNU2-7P-201ENST00000410794 178 ntBASIC2.05□□□□□ -2.08
PCDH17O14917 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.05□□□□□ -2.08
PCDH17O14917 MTCO1P5-201ENST00000433573 344 ntBASIC2.05□□□□□ -2.08
PCDH17O14917 AL163195.1-201ENST00000496941 348 ntBASIC2.05□□□□□ -2.08
PCDH17O14917 DEFB108E-201ENST00000524692 240 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms